Gene: FAN25G0513
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN25G0513
- Transcript Identifier FAN25G0513.1
- Gene Type Coding gene
- Location Fvb3-1 : 23029444-23038731 : positive
Gene Family Information
- ID HOM05D006308
- #Genes/#Species 126/97
- Phylogenetic origin
- ID ORTHO05D007820
- #Genes/#Species 126/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb3-1-augustus-gene-230.45.v1.0.a1
- pacid 50554662
Descriptions
- Description PF00076//PF02410 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ribosomal silencing factor during starvation (RsfS)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G12930 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G12930 |
| GO:0000427 | ISO | PLAZA Integrative Orthology | plastid-encoded plastid RNA polymerase complex | AT3G12930 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT3G12930 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000504 | RNA recognition motif domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR034201 | RNPS1, RNA recognition motif |
| IPR043519 | Nucleotidyltransferase superfamily |
| IPR004394 | Protein Iojap/ribosomal silencing factor RsfS |
| Mapman id | Description |
|---|---|
| 17.3.1.2.1 | Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).peripheral components.component RNPS1 |