Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO013G0324 Papaver somniferum HOM05D001366 ORTHO05D005449 1.7e-54 215.7 107 100.0
PSO832G3977 Papaver somniferum HOM05D001366 ORTHO05D005449 2.3e-54 215.3 107 99.1
PSO761G0276 Papaver somniferum HOM05D001366 ORTHO05D005449 5.0e-54 214.2 107 99.1
PSO700G0345 Papaver somniferum HOM05D001366 ORTHO05D005449 1.9e-53 212.2 107 98.1
CANSAT25G2801 Cannabis sativa HOM05D001366 ORTHO05D005449 4.3e-53 211.1 107 96.3
Actinidia29656 Actinidia chinensis HOM05D001366 ORTHO05D005449 1.2e-52 209.5 107 95.3
ATR0691G175 Amborella trichopoda HOM05D001366 ORTHO05D005449 2.1e-52 208.8 107 96.3
Aqoxy2G03242 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 3.6e-52 208.0 107 93.5
TAR625G0060 Trochodendron aralioides HOM05D001366 ORTHO05D005449 6.2e-52 207.2 107 95.3
GSVIVG01009213001 Vitis vinifera HOM05D001366 ORTHO05D005449 6.2e-52 207.2 107 95.3
Aqoxy6G00666 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 8.1e-52 206.8 107 94.4
Nn1g05642 Nelumbo nucifera HOM05D001366 ORTHO05D005449 1.1e-51 206.5 107 93.5
Glyma.02G216100 Glycine max HOM05D001366 ORTHO05D005449 1.4e-51 206.1 107 94.4
Phvul.008G183300 Phaseolus vulgaris HOM05D001366 ORTHO05D005449 1.4e-51 206.1 107 94.4
Lalb_Chr11g0064851 Lupinus albus HOM05D001366 ORTHO05D005449 1.8e-51 205.7 107 93.5
LjContig00408g0006754 Lotus japonicus HOM05D001366 ORTHO05D005449 2.3e-51 205.3 107 94.4
MBI19_g32700_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D005449 3.1e-51 204.9 107 94.4
CiPaw.07G162800 Carya illinoinensis HOM05D001366 ORTHO05D005449 4.0e-51 204.5 107 93.5
FvH4_5g34180 Fragaria vesca HOM05D001366 ORTHO05D005449 4.0e-51 204.5 107 93.5
FAN18G2982 Fragaria x ananassa HOM05D001366 ORTHO05D005449 4.0e-51 204.5 107 93.5
CiPaw.08G057200 Carya illinoinensis HOM05D001366 ORTHO05D005449 6.8e-51 203.8 107 91.6
Hma1.2p1_0125F.1_g058680 Hydrangea macrophylla HOM05D001366 ORTHO05D005449 6.8e-51 203.8 107 93.5
Lalb_Chr08g0242611 Lupinus albus HOM05D001366 ORTHO05D005449 6.8e-51 203.8 107 92.5
Prupe.1G536300 Prunus persica HOM05D001366 ORTHO05D005449 6.8e-51 203.8 107 93.5
EL10Ac8g20405 Beta vulgaris HOM05D001366 ORTHO05D005449 1.2e-50 203.0 107 91.6
Medtr7g005540 Medicago truncatula HOM05D001366 ORTHO05D005449 1.2e-50 203.0 107 92.5
Manes.18G057000 Manihot esculenta HOM05D001366 ORTHO05D005449 1.5e-50 202.6 107 92.5
Cpa.g.sc21.43 Carica papaya HOM05D001366 ORTHO05D005449 2.0e-50 202.2 107 92.5
Eucgr.F00436 Eucalyptus grandis HOM05D001366 ORTHO05D005449 2.0e-50 202.2 107 93.5
FAN04G2369 Fragaria x ananassa HOM05D001366 ORTHO05D005449 2.6e-50 201.8 107 91.6
Atru.chr13.973 Acer truncatum HOM05D001366 ORTHO05D005449 3.4e-50 201.4 107 90.7
CAN.G1104.8 Capsicum annuum HOM05D001366 ORTHO05D005449 3.4e-50 201.4 107 92.5
Nitab4.5_0000885g0060 Nicotiana tabacum HOM05D001366 ORTHO05D005449 3.4e-50 201.4 107 91.6
Peaxi162Scf00160g00913 Petunia axillaris HOM05D001366 ORTHO05D005449 3.4e-50 201.4 107 91.6
Rhsim07G0213700 Rhododendron simsii HOM05D001366 ORTHO05D005449 3.4e-50 201.4 107 91.6
Sed0016266 Sechium edule HOM05D001366 ORTHO05D005449 3.4e-50 201.4 107 91.6
Solyc12g088030.2 Solanum lycopersicum HOM05D001366 ORTHO05D005449 3.4e-50 201.4 107 92.5
Sopen12g030060 Solanum pennellii HOM05D001366 ORTHO05D005449 3.4e-50 201.4 107 92.5
arahy.Tifrunner.gnm1.ann1.8785AP Arachis hypogaea HOM05D001366 ORTHO05D005449 4.4e-50 201.1 107 90.7
arahy.Tifrunner.gnm1.ann1.CRNC3Y Arachis hypogaea HOM05D001366 ORTHO05D005449 4.4e-50 201.1 107 90.7
Potri.005G151700 Populus trichocarpa HOM05D001366 ORTHO05D005449 4.4e-50 201.1 107 90.7
Glyma.14G183100 Glycine max HOM05D001366 ORTHO05D005449 5.8e-50 200.7 107 92.5
Ciclev10002917m.g Citrus clementina HOM05D001366 ORTHO05D005449 7.5e-50 200.3 107 91.6
Haze_22489 Corylus avellana HOM05D001366 ORTHO05D005449 7.5e-50 200.3 107 90.7
Gorai.009G278800 Gossypium raimondii HOM05D001366 ORTHO05D005449 7.5e-50 200.3 107 91.6
Lalb_Chr23g0269931 Lupinus albus HOM05D001366 ORTHO05D005449 7.5e-50 200.3 107 91.6
RcHm_v2.0_Chr7g0233761 Rosa chinensis HOM05D001366 ORTHO05D005449 7.5e-50 200.3 107 91.6
Sed0015347 Sechium edule HOM05D001366 ORTHO05D005449 7.5e-50 200.3 107 90.7
Atru.chr11.619 Acer truncatum HOM05D001366 ORTHO05D005449 9.9e-50 199.9 107 89.7
arahy.Tifrunner.gnm1.ann1.HU70H8 Arachis hypogaea HOM05D001366 ORTHO05D005449 9.9e-50 199.9 107 89.7
COL.COLO4_35286 Corchorus olitorius HOM05D001366 ORTHO05D005449 9.9e-50 199.9 107 91.6
PGSC0003DMG400002052 Solanum tuberosum HOM05D001366 ORTHO05D005449 9.9e-50 199.9 107 91.6
CsaV3_2G033370 Cucumis sativus L. HOM05D001366 ORTHO05D005449 1.3e-49 199.5 107 89.7
Nitab4.5_0000354g0080 Nicotiana tabacum HOM05D001366 ORTHO05D005449 1.3e-49 199.5 107 91.6
TPR.G15622 Trifolium pratense HOM05D001366 ORTHO05D005449 1.3e-49 199.5 105 92.4
EL10Ac9g20840 Beta vulgaris HOM05D001366 ORTHO05D005449 1.7e-49 199.1 107 91.6
ClCG11G014700 Citrullus lanatus HOM05D001366 ORTHO05D005449 1.7e-49 199.1 107 90.7
DCAR_006444 Daucus carota HOM05D001366 ORTHO05D005449 1.7e-49 199.1 107 90.7
arahy.Tifrunner.gnm1.ann1.T41BVH Arachis hypogaea HOM05D001366 ORTHO05D005449 2.2e-49 198.7 107 89.7
CSS0026904 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 2.2e-49 198.7 107 90.7
Gohir.D05G220900 Gossypium hirsutum HOM05D001366 ORTHO05D005449 2.2e-49 198.7 107 91.6
Gorai.009G228000 Gossypium raimondii HOM05D001366 ORTHO05D005449 2.2e-49 198.7 107 91.6
Lsat_1_v5_gn_6_107360 Lactuca sativa HOM05D001366 ORTHO05D005449 2.2e-49 198.7 106 90.6
Psat2g064960 Pisum sativum HOM05D001366 ORTHO05D005449 2.2e-49 198.7 107 90.7
Cc10_g08370 Coffea canephora HOM05D001366 ORTHO05D005449 2.9e-49 198.4 107 90.7
Gohir.A05G264200 Gossypium hirsutum HOM05D001366 ORTHO05D005449 2.9e-49 198.4 107 90.7
Gohir.D05G266700 Gossypium hirsutum HOM05D001366 ORTHO05D005449 3.7e-49 198.0 107 90.7
Hund07854 Selenicereus undatus HOM05D001366 ORTHO05D005449 3.7e-49 198.0 107 89.7
HanXRQChr10g0277741 Helianthus annuus HOM05D001366 ORTHO05D005449 4.9e-49 197.6 107 89.7
BcaNung05637 Brassica carinata HOM05D001366 ORTHO05D005449 8.3e-49 196.8 107 89.7
A03p55290 Brassica napus HOM05D001366 ORTHO05D005449 8.3e-49 196.8 107 89.7
C07p53590 Brassica napus HOM05D001366 ORTHO05D005449 8.3e-49 196.8 107 89.7
BraA03t14588Z Brassica rapa HOM05D001366 ORTHO05D005449 8.3e-49 196.8 107 89.7
MELO3C008106.2 Cucumis melo HOM05D001366 ORTHO05D005449 1.1e-48 196.4 107 88.8
PGR042G3224 Punica granatum HOM05D001366 ORTHO05D005449 1.1e-48 196.4 107 88.8
HPP92_010288 Vanilla planifolia HOM05D001366 ORTHO05D005449 1.1e-48 196.4 106 89.6
Zm00001eb356100 Zea mays HOM05D001366 ORTHO05D005449 1.1e-48 196.4 107 90.7
BcaC09g50868 Brassica carinata HOM05D001366 ORTHO05D003220 1.4e-48 196.1 106 88.7
C01p19760 Brassica napus HOM05D001366 ORTHO05D003220 1.4e-48 196.1 106 88.7
BolC1t01904H Brassica oleracea HOM05D001366 ORTHO05D003220 1.4e-48 196.1 106 88.7
Thecc.08G074000 Theobroma cacao HOM05D001366 ORTHO05D005449 1.4e-48 196.1 107 89.7
TWI09G0135 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 1.4e-48 196.1 107 88.8
Aa31LG4G9540 Aethionema arabicum HOM05D001366 ORTHO05D005449 1.9e-48 195.7 107 88.8
Carub.0007s1663 Capsella rubella HOM05D001366 ORTHO05D005449 1.9e-48 195.7 107 88.8
BcaC06g32884 Brassica carinata HOM05D001366 ORTHO05D005449 2.4e-48 195.3 107 88.8
BolC7t45851H Brassica oleracea HOM05D001366 ORTHO05D005449 2.4e-48 195.3 107 88.8
CSS0031876 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 2.4e-48 195.3 107 90.7
CARHR231830 Cardamine hirsuta HOM05D001366 ORTHO05D005449 2.4e-48 195.3 107 87.9
Ah.01g003970 Amaranthus hybridus HOM05D001366 ORTHO05D005449 4.1e-48 194.5 107 88.8
AL7G28780 Arabidopsis lyrata HOM05D001366 ORTHO05D005449 4.1e-48 194.5 107 87.9
AT4G24440 Arabidopsis thaliana HOM05D001366 ORTHO05D005449 4.1e-48 194.5 107 87.9
Thhalv10026637m.g Eutrema salsugineum HOM05D001366 ORTHO05D005449 4.1e-48 194.5 107 87.9
Sp7g22400 Schrenkiella parvula HOM05D001366 ORTHO05D005449 4.1e-48 194.5 107 87.9
A01p15810 Brassica napus HOM05D001366 ORTHO05D003220 5.4e-48 194.1 105 88.6
BraA01t01516Z Brassica rapa HOM05D001366 ORTHO05D003220 5.4e-48 194.1 105 88.6
CsaV3_2G033350 Cucumis sativus L. HOM05D001366 ORTHO05D005449 5.4e-48 194.1 107 88.8
Duzib041G0019 Durio zibethinus HOM05D001366 ORTHO05D005449 5.4e-48 194.1 107 87.9
TWI73G1055 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 5.4e-48 194.1 107 87.9
Os05g0107700 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 7.1e-48 193.7 107 89.7
THA.LOC104815469 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 7.1e-48 193.7 107 87.9
A08p21460 Brassica napus HOM05D001366 ORTHO05D005449 1.2e-47 193.0 107 87.9
BolC8t48576H Brassica oleracea HOM05D001366 ORTHO05D005449 1.2e-47 193.0 107 87.9
BraA08t34095Z Brassica rapa HOM05D001366 ORTHO05D005449 1.2e-47 193.0 107 87.9
Rhsim02G0071900 Rhododendron simsii HOM05D001366 ORTHO05D005449 1.2e-47 193.0 123 81.3
ECA240G3991 Erigeron canadensis HOM05D001366 ORTHO05D005449 2.1e-47 192.2 107 87.9
HanXRQChr03g0063191 Helianthus annuus HOM05D001366 ORTHO05D005449 2.1e-47 192.2 107 87.9
Gohir.A05G216500 Gossypium hirsutum HOM05D001366 ORTHO05D005449 6.0e-47 190.7 117 83.8
MSTRG.5323 Avicennia marina HOM05D001366 ORTHO05D005449 7.8e-47 190.3 107 86.9
THA.LOC104799853 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 7.8e-47 190.3 107 86.0
Oeu040884.1 Olea europaea HOM05D001366 ORTHO05D005449 1.7e-46 189.1 107 86.9
TPR.G38776 Trifolium pratense HOM05D001366 ORTHO05D005449 5.1e-46 187.6 107 86.0
SalBow3G1925 Salvia bowleyana HOM05D001366 ORTHO05D005449 6.6e-46 187.2 107 87.9
Medtr5g066740 Medicago truncatula HOM05D001366 ORTHO05D005449 8.6e-46 186.8 107 84.1
MSTRG.27758 Avicennia marina HOM05D001366 ORTHO05D005449 1.9e-45 185.7 107 85.0
Os01g0970500 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 1.9e-45 185.7 104 85.6
SalBow6G3832 Salvia bowleyana HOM05D001366 ORTHO05D005449 2.5e-45 185.3 107 86.9
SalBow6G5818 Salvia bowleyana HOM05D001366 ORTHO05D005449 2.5e-45 185.3 107 86.9
Migut.N01147 Erythranthe guttata HOM05D001366 ORTHO05D005449 4.3e-45 184.5 107 86.0
Sabra05G0119200 Salix brachista HOM05D001366 ORTHO05D005449 7.3e-45 183.7 133 72.2
Zm00001eb139900 Zea mays HOM05D001366 ORTHO05D005449 7.3e-45 183.7 104 84.6
SGA_v2.0_scaffold337G49194 Striga asiatica HOM05D001366 ORTHO05D005449 1.2e-44 183.0 107 85.0
TWI56G0439 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 1.2e-44 183.0 107 83.2
unitig_22.g6842 Utricularia gibba HOM05D001366 ORTHO05D005449 1.1e-43 179.9 107 82.2
SGA_v2.0_scaffold219G42523 Striga asiatica HOM05D001366 ORTHO05D005449 2.4e-43 178.7 105 83.8
MSTRG.16686 Avicennia marina HOM05D001366 ORTHO05D005449 4.0e-43 177.9 106 80.2
MD08G1203900 Malus domestica HOM05D001366 ORTHO05D005449 4.0e-43 177.9 94 92.6
Psat0s2399g0160 Pisum sativum HOM05D001366 ORTHO05D005449 1.5e-42 176.0 104 79.8
AUR62017035 Chenopodium quinoa HOM05D001366 ORTHO05D005449 2.0e-42 175.6 94 91.5
ECA246G1742 Erigeron canadensis HOM05D001366 ORTHO05D005449 9.9e-42 173.3 98 84.7
SHI29728 Sapria himalayana HOM05D001366 ORTHO05D005449 2.9e-41 171.8 107 80.4
Actinidia19254 Actinidia chinensis HOM05D001366 ORTHO05D005449 3.2e-40 168.3 107 74.8
TAR381G0322 Trochodendron aralioides HOM05D001366 ORTHO05D005449 3.9e-38 161.4 107 76.6
Oeu038169.3 Olea europaea HOM05D001366 ORTHO05D005449 1.5e-37 159.5 165 56.4
Lsat_1_v5_gn_7_43741 Lactuca sativa HOM05D001366 ORTHO05D005449 4.7e-36 154.5 83 89.2
Duzib116G0949 Durio zibethinus HOM05D001366 ORTHO05D005449 2.4e-35 152.1 107 72.9
Mapoly0012s0108 Marchantia polymorpha HOM05D001366 ORTHO05D005449 9.0e-35 150.2 107 63.6
Pp3c15_13540 Physcomitrium patens HOM05D001366 ORTHO05D005449 7.6e-34 147.1 107 63.6
AagrBONN_evm.TU.Sc2ySwM_228.5579 Anthoceros agrestis HOM05D001366 ORTHO05D005449 1.3e-33 146.4 107 60.7
Pp3c9_10830 Physcomitrium patens HOM05D001366 ORTHO05D005449 1.3e-33 146.4 107 63.6
Actinidia19617 Actinidia chinensis HOM05D001366 ORTHO05D005449 2.2e-33 145.6 71 97.2
AagrBONN_evm.TU.Sc2ySwM_228.3950 Anthoceros agrestis HOM05D001366 ORTHO05D005449 3.2e-32 141.7 107 58.9
SMO169G0007 Selaginella moellendorffii HOM05D001366 ORTHO05D005449 2.7e-31 138.7 106 58.5
RcHm_v2.0_Chr5g0012851 Rosa chinensis HOM05D001366 ORTHO05D005449 1.2e-26 123.2 107 57.9
Migut.B00439 Erythranthe guttata HOM05D001366 ORTHO05D005449 7.6e-26 120.6 107 58.9
unitig_8.g3420 Utricularia gibba HOM05D001366 ORTHO05D005449 4.2e-24 114.8 93 62.4
Dinv42590 Davidia involucrata HOM05D001366 ORTHO05D005449 7.1e-24 114.0 69 84.1
vmacro04625 Vaccinium macrocarpon HOM05D001366 ORTHO05D005449 1.2e-23 113.2 60 95.0
Lsat_1_v5_gn_4_60280 Lactuca sativa HOM05D001366 ORTHO05D005449 1.6e-23 112.8 66 83.3
Ca_08744_v3 Cicer arietinum L. HOM05D001366 ORTHO05D005449 2.1e-23 112.5 60 95.0
VMungo0647G1399 Vigna mungo HOM05D001366 ORTHO05D005449 2.1e-23 112.5 60 95.0
QL09p018667 Quercus lobata HOM05D001366 ORTHO05D005449 6.0e-23 110.9 60 93.3
Haze_27711 Corylus avellana HOM05D001366 ORTHO05D005449 3.3e-21 105.1 100 49.0
AagrBONN_evm.TU.Sc2ySwM_368.1269 Anthoceros agrestis HOM05D001366 ORTHO05D005449 5.6e-21 104.4 105 46.7
C06p07570 Brassica napus HOM05D001366 ORTHO05D005449 1.4e-19 99.8 107 57.9
BolC6t35845H Brassica oleracea HOM05D001366 ORTHO05D005449 1.4e-19 99.8 107 57.9
BcaC08g43388 Brassica carinata HOM05D001366 ORTHO05D005449 3.4e-18 95.1 78 64.1
Mapoly0067s0078 Marchantia polymorpha HOM05D001366 ORTHO05D005449 2.2e-17 92.4 98 45.9
HanXRQChr05g0143271 Helianthus annuus HOM05D001366 ORTHO05D005449 1.6e-15 86.3 51 82.4
AUR62014838 Chenopodium quinoa HOM05D001366 ORTHO05D005449 6.0e-15 84.3 57 71.9
Cre10.g424150 Chlamydomonas reinhardtii HOM05D001366 ORTHO05D005449 2.5e-13 79.0 100 37.0
Lsat_1_v5_gn_8_150280 Lactuca sativa HOM05D001675 ORTHO05D004161 1.4e-11 73.2 47 76.6
PRCOL_00001724 Prasinoderma coloniale HOM05D001366 ORTHO05D005449 1.2e-10 70.1 92 34.8
TAR374G0947 Trochodendron aralioides HOM05D000025 ORTHO05D000040 1.5e-10 69.7 34 85.3
HanXRQChr11g0353851 Helianthus annuus HOM05D001366 ORTHO05D005449 2.2e-09 65.9 36 86.1
Lsat_1_v5_gn_8_45161 Lactuca sativa HOM05D001675 ORTHO05D001808 4.6e-07 58.2 38 76.3
Zm00001eb072320 Zea mays HOM05D001366 ORTHO05D446550 5.1e-06 54.7 38 63.2


User provided reference genes

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