Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004480 Prasinoderma coloniale HOM05D005639 ORTHO05D007234 4.8e-285 984.2 636 100.0
MCO15G200 Micromonas commoda HOM05D005639 ORTHO05D007234 1.1e-58 232.3 503 36.0
Sed0017304 Sechium edule HOM05D005639 ORTHO05D007234 9.0e-58 229.2 484 40.1
Sabra05G0051400 Salix brachista HOM05D005639 ORTHO05D007234 3.4e-57 227.3 468 39.1
Potri.005G061000 Populus trichocarpa HOM05D005639 ORTHO05D007234 1.3e-56 225.3 468 40.4
Cpa.g.sc19.212 Carica papaya HOM05D005639 ORTHO05D007234 2.9e-56 224.2 473 40.0
CiPaw.04G138400 Carya illinoinensis HOM05D005639 ORTHO05D007234 8.4e-56 222.6 480 40.4
Mapoly0012s0170 Marchantia polymorpha HOM05D005639 ORTHO05D007234 8.4e-56 222.6 478 38.9
DCAR_003859 Daucus carota HOM05D005639 ORTHO05D007234 2.5e-55 221.1 488 39.1
Potri.007G107900 Populus trichocarpa HOM05D005639 ORTHO05D007234 2.5e-55 221.1 468 40.2
GSVIVG01021618001 Vitis vinifera HOM05D005639 ORTHO05D007234 4.2e-55 220.3 484 38.8
MSTRG.13266 Avicennia marina HOM05D005639 ORTHO05D007234 7.1e-55 219.5 471 38.9
HanXRQChr17g0569471 Helianthus annuus HOM05D005639 ORTHO05D007234 2.1e-54 218.0 473 39.3
CBR_g50978 Chara braunii HOM05D005639 ORTHO05D007234 2.7e-54 217.6 548 36.7
ClCG08G001610 Citrullus lanatus HOM05D005639 ORTHO05D007234 6.0e-54 216.5 492 38.6
Dinv03058 Davidia involucrata HOM05D005639 ORTHO05D007234 1.0e-53 215.7 466 39.3
MD05G1274300 Malus domestica HOM05D005639 ORTHO05D007234 1.0e-53 215.7 470 38.9
CsaV3_5G039540 Cucumis sativus L. HOM05D005639 ORTHO05D007234 3.0e-53 214.2 478 38.5
Lsat_1_v5_gn_4_3900 Lactuca sativa HOM05D005639 ORTHO05D007234 3.0e-53 214.2 469 38.6
SGA_v2.0_scaffold106G30666 Striga asiatica HOM05D005639 ORTHO05D007234 1.1e-52 212.2 466 39.9
Nn5g27628 Nelumbo nucifera HOM05D005639 ORTHO05D007234 1.5e-52 211.8 481 39.7
Cfa016817 Carpinus fangiana HOM05D005639 ORTHO05D007234 2.5e-52 211.1 491 38.9
Atru.chr10.888 Acer truncatum HOM05D005639 ORTHO05D007234 3.3e-52 210.7 480 37.9
Eucgr.D00190 Eucalyptus grandis HOM05D005639 ORTHO05D007234 3.3e-52 210.7 499 38.3
AagrBONN_evm.TU.Sc2ySwM_228.3905 Anthoceros agrestis HOM05D005639 ORTHO05D007234 7.4e-52 209.5 472 39.4
PGR083G2688 Punica granatum HOM05D005639 ORTHO05D007234 1.3e-51 208.8 486 39.9
Sabra07G0088400 Salix brachista HOM05D005639 ORTHO05D007234 1.6e-51 208.4 465 38.9
CSS0044875 Camellia sinensis var. sinensis HOM05D005639 ORTHO05D007234 2.8e-51 207.6 468 38.7
Solyc02g069770.3 Solanum lycopersicum HOM05D005639 ORTHO05D007234 2.8e-51 207.6 418 39.7
Zm00001eb218720 Zea mays HOM05D005639 ORTHO05D007234 2.8e-51 207.6 490 38.0
Glyma.09G023100 Glycine max HOM05D005639 ORTHO05D007234 4.8e-51 206.8 469 37.5
Sopen02g018930 Solanum pennellii HOM05D005639 ORTHO05D007234 4.8e-51 206.8 418 39.5
TWI73G0023 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 6.3e-51 206.5 471 39.3
Ciclev10014949m.g Citrus clementina HOM05D005639 ORTHO05D007234 1.1e-50 205.7 468 39.1
ECA234G3170 Erigeron canadensis HOM05D005639 ORTHO05D007234 1.1e-50 205.7 475 38.3
MD10G1254000 Malus domestica HOM05D005639 ORTHO05D007234 1.1e-50 205.7 488 36.7
Hma1.2p1_0333F.1_g128320 Hydrangea macrophylla HOM05D005639 ORTHO05D007234 1.4e-50 205.3 461 39.7
Cc09_g08220 Coffea canephora HOM05D005639 ORTHO05D007234 1.8e-50 204.9 471 39.9
HPP92_013994 Vanilla planifolia HOM05D005639 ORTHO05D007234 2.4e-50 204.5 470 39.4
Nitab4.5_0004077g0020 Nicotiana tabacum HOM05D005639 ORTHO05D007234 4.1e-50 203.8 461 38.6
VMungo0540G0794 Vigna mungo HOM05D005639 ORTHO05D007234 4.1e-50 203.8 489 36.2
Migut.H01334 Erythranthe guttata HOM05D005639 ORTHO05D007234 5.3e-50 203.4 429 39.2
Pp3c15_1000 Physcomitrium patens HOM05D005639 ORTHO05D007234 6.9e-50 203.0 482 39.2
Lj6g0009484 Lotus japonicus HOM05D005639 ORTHO05D007234 9.0e-50 202.6 472 37.5
Hund22392 Selenicereus undatus HOM05D005639 ORTHO05D007234 9.0e-50 202.6 461 38.4
AT4G21130 Arabidopsis thaliana HOM05D005639 ORTHO05D007234 1.5e-49 201.8 479 33.8
PGSC0003DMG402021193 Solanum tuberosum HOM05D005639 ORTHO05D007234 1.5e-49 201.8 465 38.1
THA.LOC104812393 Tarenaya hassleriana HOM05D005639 ORTHO05D007234 1.5e-49 201.8 468 37.8
FvH4_3g09990 Fragaria vesca HOM05D005639 ORTHO05D007234 2.6e-49 201.1 473 37.0
Prupe.4G089600 Prunus persica HOM05D005639 ORTHO05D007234 2.6e-49 201.1 496 36.3
THA.LOC104806253 Tarenaya hassleriana HOM05D005639 ORTHO05D007234 2.6e-49 201.1 469 36.9
Thecc.06G000900 Theobroma cacao HOM05D005639 ORTHO05D007234 2.6e-49 201.1 487 37.6
Ca_00807_v3 Cicer arietinum L. HOM05D005639 ORTHO05D007234 4.5e-49 200.3 424 38.0
SMO146G0033 Selaginella moellendorffii HOM05D005639 ORTHO05D007234 4.5e-49 200.3 442 38.5
Dinv01990 Davidia involucrata HOM05D005639 ORTHO05D007234 7.6e-49 199.5 471 38.4
Peaxi162Scf00670g00332 Petunia axillaris HOM05D005639 ORTHO05D007234 7.6e-49 199.5 460 38.0
Haze_19855 Corylus avellana HOM05D005639 ORTHO05D007234 1.0e-48 199.1 512 36.9
FAN25G3670 Fragaria x ananassa HOM05D005639 ORTHO05D007234 1.0e-48 199.1 489 36.4
Manes.13G081200 Manihot esculenta HOM05D005639 ORTHO05D007234 1.7e-48 198.4 468 38.5
Nitab4.5_0002719g0080 Nicotiana tabacum HOM05D005639 ORTHO05D007234 1.7e-48 198.4 463 38.2
FAN21G2832 Fragaria x ananassa HOM05D005639 ORTHO05D007234 2.2e-48 198.0 473 36.6
PSO541G1457 Papaver somniferum HOM05D005639 ORTHO05D007234 2.2e-48 198.0 469 37.1
Pp3c13_22280 Physcomitrium patens HOM05D005639 ORTHO05D007234 2.9e-48 197.6 474 36.5
RcHm_v2.0_Chr5g0015871 Rosa chinensis HOM05D005639 ORTHO05D007234 2.9e-48 197.6 474 36.9
TWI09G1293 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 2.9e-48 197.6 472 37.5
Lalb_Chr18g0057911 Lupinus albus HOM05D005639 ORTHO05D007234 3.8e-48 197.2 476 37.0
Psat1g168120 Pisum sativum HOM05D005639 ORTHO05D007234 5.0e-48 196.8 487 36.1
Medtr2g029940 Medicago truncatula HOM05D005639 ORTHO05D007234 6.5e-48 196.4 467 36.6
Phvul.006G129100 Phaseolus vulgaris HOM05D005639 ORTHO05D007234 8.5e-48 196.1 490 35.3
vmacro03396 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 8.5e-48 196.1 465 37.0
CDE05G0927 Ceratophyllum demersum HOM05D005639 ORTHO05D007234 1.1e-47 195.7 468 38.0
PSO675G8746 Papaver somniferum HOM05D005639 ORTHO05D007234 1.4e-47 195.3 475 37.7
Rhsim13G0120200 Rhododendron simsii HOM05D005639 ORTHO05D007234 1.4e-47 195.3 467 37.7
Sed0027243 Sechium edule HOM05D005639 ORTHO05D007234 1.4e-47 195.3 486 36.4
Aqoxy1G01607 Aquilegia oxysepala HOM05D005639 ORTHO05D007234 1.9e-47 194.9 469 39.2
SalBow7G3138 Salvia bowleyana HOM05D005639 ORTHO05D007234 2.5e-47 194.5 506 35.6
ATR0165G031 Amborella trichopoda HOM05D005639 ORTHO05D007234 3.2e-47 194.1 473 36.8
FAN16G1271 Fragaria x ananassa HOM05D005639 ORTHO05D007234 4.2e-47 193.7 482 31.5
MELO3C022131.2 Cucumis melo HOM05D005639 ORTHO05D007234 5.5e-47 193.4 456 38.2
COL.COLO4_26825 Corchorus olitorius HOM05D005639 ORTHO05D007234 1.2e-46 192.2 487 37.0
Ah.14g085710 Amaranthus hybridus HOM05D005639 ORTHO05D007234 2.7e-46 191.0 464 36.0
arahy.Tifrunner.gnm1.ann1.JS3IU7 Arachis hypogaea HOM05D005639 ORTHO05D007234 2.7e-46 191.0 469 35.8
Os03g0625900 Oryza sativa ssp. japonica HOM05D005639 ORTHO05D007234 4.6e-46 190.3 430 39.8
unitig_8.g4887 Utricularia gibba HOM05D005639 ORTHO05D007234 7.9e-46 189.5 459 36.6
Zm00001eb050650 Zea mays HOM05D005639 ORTHO05D007234 1.8e-45 188.3 465 37.6
Sc24g0001380 Simmondsia chinensis HOM05D005639 ORTHO05D007234 2.3e-45 188.0 466 37.6
Actinidia36001 Actinidia chinensis HOM05D005639 ORTHO05D007234 3.0e-45 187.6 469 37.1
TAR626G0701 Trochodendron aralioides HOM05D005639 ORTHO05D007234 8.7e-45 186.0 407 39.1
Oeu030450.1 Olea europaea HOM05D005639 ORTHO05D007234 3.3e-44 184.1 523 29.6
Thhalv10028589m.g Eutrema salsugineum HOM05D005639 ORTHO05D007234 5.7e-44 183.3 481 36.0
Carub.0006s3332 Capsella rubella HOM05D005639 ORTHO05D007234 7.4e-44 183.0 474 31.9
Gohir.D02G104300 Gossypium hirsutum HOM05D005639 ORTHO05D007234 9.7e-44 182.6 483 36.4
AL6G49000 Arabidopsis lyrata HOM05D005639 ORTHO05D007234 1.3e-43 182.2 405 36.8
Gorai.005G118400 Gossypium raimondii HOM05D005639 ORTHO05D007234 1.3e-43 182.2 483 36.4
Gohir.A02G094000 Gossypium hirsutum HOM05D005639 ORTHO05D007234 2.8e-43 181.0 485 36.7
CiPaw.10G033400 Carya illinoinensis HOM05D005639 ORTHO05D007234 1.8e-42 178.3 488 32.4
FAN11G3706 Fragaria x ananassa HOM05D005639 ORTHO05D007234 1.5e-41 175.3 482 30.7
Aa31LG9G9170 Aethionema arabicum HOM05D005639 ORTHO05D007234 2.0e-41 174.9 461 36.9
AL7G32990 Arabidopsis lyrata HOM05D005639 ORTHO05D007234 3.4e-41 174.1 479 31.5
QL03p009300 Quercus lobata HOM05D005639 ORTHO05D007234 4.5e-41 173.7 581 29.1
AT4G05410 Arabidopsis thaliana HOM05D005639 ORTHO05D007234 1.7e-40 171.8 473 35.9
AUR62033065 Chenopodium quinoa HOM05D005639 ORTHO05D007234 1.7e-40 171.8 439 33.3
arahy.Tifrunner.gnm1.ann1.MSHM5J Arachis hypogaea HOM05D005639 ORTHO05D007234 6.5e-40 169.9 514 32.9
EL10Ac4g08968 Beta vulgaris HOM05D005639 ORTHO05D007234 6.5e-40 169.9 413 37.5
A03p30310 Brassica napus HOM05D005639 ORTHO05D007234 6.5e-40 169.9 406 37.4
C03p36580 Brassica napus HOM05D005639 ORTHO05D007234 6.5e-40 169.9 406 37.2
CARHR252170 Cardamine hirsuta HOM05D005639 ORTHO05D007234 6.5e-40 169.9 474 34.2
BcaC01g06663 Brassica carinata HOM05D005639 ORTHO05D007234 8.5e-40 169.5 406 37.4
BraA03t12214Z Brassica rapa HOM05D005639 ORTHO05D007234 1.4e-39 168.7 406 37.7
BolC3t15973H Brassica oleracea HOM05D005639 ORTHO05D007234 3.2e-39 167.5 406 37.7
Glyma.15G129100 Glycine max HOM05D005639 ORTHO05D007234 3.2e-39 167.5 261 37.5
BcaB01g02559 Brassica carinata HOM05D005639 ORTHO05D007234 1.6e-38 165.2 468 35.5
CiPaw.02G032400 Carya illinoinensis HOM05D005639 ORTHO05D007234 1.6e-38 165.2 478 30.8
BolC9t56080H Brassica oleracea HOM05D005639 ORTHO05D007234 2.7e-38 164.5 475 35.2
BraA09t38117Z Brassica rapa HOM05D005639 ORTHO05D007234 1.4e-37 162.2 475 34.7
A09p25350 Brassica napus HOM05D005639 ORTHO05D007234 8.8e-37 159.5 468 35.5
C09p32350 Brassica napus HOM05D005639 ORTHO05D007234 8.8e-37 159.5 475 34.9
Sp6g03680 Schrenkiella parvula HOM05D005639 ORTHO05D007234 1.1e-36 159.1 468 35.5
Cre06.g278175 Chlamydomonas reinhardtii HOM05D005639 ORTHO05D007234 3.1e-34 151.0 493 30.2
HanXRQChr13g0407861 Helianthus annuus HOM05D005639 ORTHO05D007234 5.3e-34 150.2 371 35.8
AUR62042204 Chenopodium quinoa HOM05D005639 ORTHO05D007234 2.1e-30 138.3 420 30.2
Actinidia13478 Actinidia chinensis HOM05D005639 ORTHO05D007234 1.6e-25 122.1 186 40.3
Cfa027057 Carpinus fangiana HOM05D005639 ORTHO05D007234 2.3e-21 108.2 535 26.0
vmacro03440 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 7.0e-18 96.7 453 25.4
C06p38580 Brassica napus HOM05D005639 ORTHO05D007234 1.3e-11 75.9 228 29.4
BolC6t38950H Brassica oleracea HOM05D005639 ORTHO05D007234 6.3e-11 73.6 228 28.9
Actinidia13477 Actinidia chinensis HOM05D005639 ORTHO05D007234 3.8e-08 64.3 220 29.5


User provided reference genes

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