Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 2.0e-231 805.4 411 100.0
Solyc01g014490.4 Solanum lycopersicum HOM05D004763 ORTHO05D007492 6.2e-201 704.1 386 94.3
Sopen01g009200 Solanum pennellii HOM05D004763 ORTHO05D007492 6.2e-201 704.1 386 94.3
CAN.G646.1 Capsicum annuum HOM05D004763 ORTHO05D007492 7.8e-196 687.2 384 92.4
Nitab4.5_0006575g0020 Nicotiana tabacum HOM05D004763 ORTHO05D007492 8.9e-192 673.7 380 90.5
Peaxi162Scf00773g00119 Petunia axillaris HOM05D004763 ORTHO05D007492 2.2e-190 669.1 387 88.6
Nitab4.5_0003069g0050 Nicotiana tabacum HOM05D004763 ORTHO05D007492 1.9e-181 639.4 387 86.3
Cc01_g04070 Coffea canephora HOM05D004763 ORTHO05D007492 6.0e-180 634.4 387 83.5
MELO3C014639.2 Cucumis melo HOM05D004763 ORTHO05D007492 1.8e-176 622.9 387 82.2
CsaV3_4G023800 Cucumis sativus L. HOM05D004763 ORTHO05D007492 6.9e-176 620.9 387 81.9
CSS0044360 Camellia sinensis var. sinensis HOM05D004763 ORTHO05D007492 2.6e-175 619.0 381 84.0
Nn7g36058 Nelumbo nucifera HOM05D004763 ORTHO05D007492 2.6e-175 619.0 387 80.9
QL01p006243 Quercus lobata HOM05D004763 ORTHO05D007492 2.6e-175 619.0 389 82.0
Dinv36304 Davidia involucrata HOM05D004763 ORTHO05D007492 5.8e-175 617.8 387 82.2
Hund22081 Selenicereus undatus HOM05D004763 ORTHO05D007492 5.8e-175 617.8 387 81.7
CiPaw.14G125100 Carya illinoinensis HOM05D004763 ORTHO05D007492 8.4e-174 614.0 387 80.6
Sc09g0000480 Simmondsia chinensis HOM05D004763 ORTHO05D007492 8.4e-174 614.0 387 80.9
HanXRQChr14g0451781 Helianthus annuus HOM05D004763 ORTHO05D007492 1.4e-173 613.2 388 81.2
ClCG02G023620 Citrullus lanatus HOM05D004763 ORTHO05D007492 1.9e-173 612.8 393 80.4
Thecc.09G223100 Theobroma cacao HOM05D004763 ORTHO05D007492 3.2e-173 612.1 381 82.7
GSVIVG01025336001 Vitis vinifera HOM05D004763 ORTHO05D007492 4.2e-173 611.7 387 81.9
Glyma.13G342900 Glycine max HOM05D004763 ORTHO05D007492 1.2e-172 610.1 387 80.9
TAR623G1126 Trochodendron aralioides HOM05D004763 ORTHO05D007492 1.2e-172 610.1 387 80.9
Sed0013957 Sechium edule HOM05D004763 ORTHO05D007492 2.1e-172 609.4 387 79.8
Gorai.013G250000 Gossypium raimondii HOM05D004763 ORTHO05D007492 2.7e-172 609.0 381 81.4
Manes.14G014500 Manihot esculenta HOM05D004763 ORTHO05D007492 2.7e-172 609.0 388 80.7
PGR102G0325 Punica granatum HOM05D004763 ORTHO05D007492 3.5e-172 608.6 387 80.6
Migut.D00558 Erythranthe guttata HOM05D004763 ORTHO05D007492 7.9e-172 607.4 388 80.2
Gohir.D13G219100 Gossypium hirsutum HOM05D004763 ORTHO05D007492 1.0e-171 607.1 381 81.1
Medtr2g098510 Medicago truncatula HOM05D004763 ORTHO05D007492 1.3e-171 606.7 382 81.2
Psat5g288480 Pisum sativum HOM05D004763 ORTHO05D007492 2.3e-171 605.9 384 81.0
Gohir.A13G215400 Gossypium hirsutum HOM05D004763 ORTHO05D007492 3.9e-171 605.1 381 80.8
Hma1.2p1_1169F.1_g263300 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 6.7e-171 604.4 386 81.1
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 1.9e-170 602.8 382 80.4
Potri.003G211000 Populus trichocarpa HOM05D004763 ORTHO05D007492 2.5e-170 602.4 387 79.6
Eucgr.B03662 Eucalyptus grandis HOM05D004763 ORTHO05D007492 3.3e-170 602.1 388 79.9
Aqoxy1G00185 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 7.4e-170 600.9 387 79.3
arahy.Tifrunner.gnm1.ann1.P0K6XU Arachis hypogaea HOM05D004763 ORTHO05D007492 1.6e-169 599.7 382 80.9
Prupe.6G018600 Prunus persica HOM05D004763 ORTHO05D007492 1.6e-169 599.7 387 78.3
MBI01_g15753_MAGBIO Magnolia biondii HOM05D004763 ORTHO05D007492 2.1e-169 599.4 384 79.9
arahy.Tifrunner.gnm1.ann1.VYK1P0 Arachis hypogaea HOM05D004763 ORTHO05D007492 2.8e-169 599.0 382 80.9
Phvul.005G150500 Phaseolus vulgaris HOM05D004763 ORTHO05D007492 2.8e-169 599.0 384 79.4
arahy.Tifrunner.gnm1.ann1.GN3GFY Arachis hypogaea HOM05D004763 ORTHO05D007492 3.7e-169 598.6 382 80.9
AUR62019250 Chenopodium quinoa HOM05D004763 ORTHO05D007492 8.1e-169 597.4 387 78.8
TWI34G0672 Tripterygium wilfordii HOM05D004763 ORTHO05D007492 1.8e-168 596.3 387 78.8
arahy.Tifrunner.gnm1.ann1.X75IXN Arachis hypogaea HOM05D004763 ORTHO05D007492 2.4e-168 595.9 382 80.4
Lalb_Chr14g0372291 Lupinus albus HOM05D004763 ORTHO05D007492 3.1e-168 595.5 387 78.8
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 9.0e-168 594.0 371 81.1
Cpa.g.sc84.111 Carica papaya HOM05D004763 ORTHO05D007492 1.2e-167 593.6 386 78.5
Lj3g0020649 Lotus japonicus HOM05D004763 ORTHO05D007492 4.5e-167 591.7 384 78.6
Ciclev10014511m.g Citrus clementina HOM05D004763 ORTHO05D007492 5.8e-167 591.3 375 80.3
Lj4g0010878 Lotus japonicus HOM05D004763 ORTHO05D007492 5.8e-167 591.3 395 77.0
ECA238G4453 Erigeron canadensis HOM05D004763 ORTHO05D007492 3.8e-166 588.6 388 79.1
MD03G1021100 Malus domestica HOM05D004763 ORTHO05D007492 4.9e-166 588.2 387 76.7
Ah.04g161760 Amaranthus hybridus HOM05D004763 ORTHO05D007492 5.5e-165 584.7 387 78.3
RcHm_v2.0_Chr5g0078101 Rosa chinensis HOM05D004763 ORTHO05D007492 5.5e-165 584.7 378 78.3
CANSAT54G1729 Cannabis sativa HOM05D004763 ORTHO05D007492 9.3e-165 583.9 384 78.1
Rhsim01G0189300 Rhododendron simsii HOM05D004763 ORTHO05D007492 2.7e-164 582.4 452 70.6
FvH4_3g43550 Fragaria vesca HOM05D004763 ORTHO05D007492 7.9e-164 580.9 378 77.8
FAN16G3272 Fragaria x ananassa HOM05D004763 ORTHO05D007492 1.3e-163 580.1 378 77.8
Aa31LG8G7590 Aethionema arabicum HOM05D004763 ORTHO05D007492 3.0e-163 578.9 374 77.8
THA.LOC104816912 Tarenaya hassleriana HOM05D004763 ORTHO05D007492 3.0e-163 578.9 374 78.3
EL10Ac4g10318 Beta vulgaris HOM05D004763 ORTHO05D007492 8.7e-163 577.4 374 78.9
SGA_v2.0_scaffold1G00797 Striga asiatica HOM05D004763 ORTHO05D007492 1.9e-162 576.2 441 71.7
BcaC05g28282 Brassica carinata HOM05D004763 ORTHO05D007492 1.6e-161 573.2 380 76.1
PSO339G3791 Papaver somniferum HOM05D004763 ORTHO05D007492 2.1e-161 572.8 383 78.3
Sabra03G0153800 Salix brachista HOM05D004763 ORTHO05D007492 6.2e-161 571.2 356 81.2
Sabra03G0156000 Salix brachista HOM05D004763 ORTHO05D007492 6.2e-161 571.2 356 81.2
C05p43300 Brassica napus HOM05D004763 ORTHO05D007492 8.2e-161 570.9 380 75.5
AL3G34700 Arabidopsis lyrata HOM05D004763 ORTHO05D007492 3.1e-160 568.9 374 77.3
A05p28000 Brassica napus HOM05D004763 ORTHO05D007492 3.1e-160 568.9 384 75.5
COL.COLO4_09893 Corchorus olitorius HOM05D004763 ORTHO05D007492 4.0e-160 568.5 377 78.2
Sp3g18800 Schrenkiella parvula HOM05D004763 ORTHO05D007492 6.9e-160 567.8 380 76.3
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 6.9e-160 567.8 361 79.2
Carub.0003s2074 Capsella rubella HOM05D004763 ORTHO05D007492 4.5e-159 565.1 374 76.7
HPP92_020536 Vanilla planifolia HOM05D004763 ORTHO05D007492 5.8e-159 564.7 388 73.7
ATR0605G091 Amborella trichopoda HOM05D004763 ORTHO05D007492 2.2e-158 562.8 386 74.6
AT3G20780 Arabidopsis thaliana HOM05D004763 ORTHO05D007492 2.2e-158 562.8 374 76.7
Duzib150G1218 Durio zibethinus HOM05D004763 ORTHO05D007492 5.0e-158 561.6 404 74.3
BcaB06g26148 Brassica carinata HOM05D004763 ORTHO05D007492 8.4e-158 560.8 384 74.5
Lsat_1_v5_gn_2_101121 Lactuca sativa HOM05D004763 ORTHO05D007492 8.4e-158 560.8 404 73.3
BraA05t21683Z Brassica rapa HOM05D004763 ORTHO05D007492 1.4e-157 560.1 392 73.7
Os09g0279600 Oryza sativa ssp. japonica HOM05D004763 ORTHO05D007492 1.6e-156 556.6 362 76.8
Thhalv10020214m.g Eutrema salsugineum HOM05D004763 ORTHO05D007492 2.7e-156 555.8 377 75.9
BolC5t33062H Brassica oleracea HOM05D004763 ORTHO05D007492 3.5e-156 555.4 411 70.1
Aqoxy381s001 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 2.5e-154 549.3 369 76.4
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 3.2e-149 532.3 356 76.1
Lj1A366T12 Lonicera japonica HOM05D004763 ORTHO05D007492 4.1e-144 515.4 387 71.8
AagrBONN_evm.TU.Sc2ySwM_344.3405 Anthoceros agrestis HOM05D004763 ORTHO05D007492 1.2e-143 513.8 359 72.1
Actinidia39377 Actinidia chinensis HOM05D004763 ORTHO05D007492 2.7e-140 502.7 387 71.8
SMO116G0144 Selaginella moellendorffii HOM05D004763 ORTHO05D007492 4.4e-138 495.4 356 70.5
Pp3c22_12720 Physcomitrium patens HOM05D004763 ORTHO05D007492 3.1e-136 489.2 387 66.1
CBR_g31022 Chara braunii HOM05D004763 ORTHO05D007492 1.2e-135 487.3 375 66.4
Mapoly0042s0060 Marchantia polymorpha HOM05D004763 ORTHO05D007492 2.0e-135 486.5 379 65.2
CARHR096610 Cardamine hirsuta HOM05D004763 ORTHO05D007492 1.8e-128 463.4 305 76.1
Atru.chr3.2503 Acer truncatum HOM05D004763 ORTHO05D007492 7.0e-128 461.5 295 79.0
Potri.T085401 Populus trichocarpa HOM05D004763 ORTHO05D007492 5.0e-126 455.3 295 77.6
Ca_01270_v3 Cicer arietinum L. HOM05D004763 ORTHO05D007492 8.5e-126 454.5 310 74.8
DCAR_024396 Daucus carota HOM05D004763 ORTHO05D007492 3.1e-120 436.0 272 83.1
SEGI_32015 Sequoiadendron giganteum HOM05D004763 ORTHO05D007492 7.7e-119 431.4 305 71.5
FAN21G2003 Fragaria x ananassa HOM05D004763 ORTHO05D007492 2.0e-114 416.8 378 62.2
FAN11G0713 Fragaria x ananassa HOM05D004763 ORTHO05D007492 1.7e-110 403.7 300 70.0
FAN11G2145 Fragaria x ananassa HOM05D004763 ORTHO05D007492 1.7e-110 403.7 300 70.0
Lsat_1_v5_gn_1_127001 Lactuca sativa HOM05D004763 ORTHO05D007492 6.1e-108 395.2 381 58.3
Cre01.g019750 Chlamydomonas reinhardtii HOM05D004763 ORTHO05D007492 9.8e-106 387.9 377 55.4
Hma1.2p1_1169F.1_g263310 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 2.1e-100 370.2 224 80.4
Lsat_1_v5_gn_1_127121 Lactuca sativa HOM05D004763 ORTHO05D007492 5.8e-98 362.1 387 56.6
MCO09G243 Micromonas commoda HOM05D004763 ORTHO05D007492 3.5e-95 352.8 363 51.2
PRCOL_00005940 Prasinoderma coloniale HOM05D004763 ORTHO05D007492 9.5e-85 318.2 374 48.1
Zm00001eb308780 Zea mays HOM05D004763 ORTHO05D007492 1.0e-70 271.6 179 72.6
Lju1319C4G3 Lonicera japonica HOM05D004763 ORTHO05D014896 2.5e-61 240.4 242 59.1
Lsat_1_v5_gn_1_126981 Lactuca sativa HOM05D004763 ORTHO05D007492 7.4e-61 238.8 358 45.3
Oeu036968.1 Olea europaea HOM05D004763 ORTHO05D007492 5.6e-53 212.6 104 94.2
TPR.G29742 Trifolium pratense HOM05D004763 ORTHO05D007492 4.0e-51 206.5 246 50.4
PGSC0003DMG400012096 Solanum tuberosum HOM05D004763 ORTHO05D014896 2.0e-34 151.0 86 87.2
Ca_01269_v3 Cicer arietinum L. HOM05D000073 ORTHO05D000033 2.9e-33 147.1 86 88.4
MBI09_g40619_MAGBIO Magnolia biondii HOM05D004763 ORTHO05D019264 2.3e-30 137.5 106 67.9
MBI04_g09599_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D019264 3.0e-30 137.1 106 67.9
MBI02_g24793_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D019264 2.5e-29 134.0 106 67.0
PGSC0003DMG401017076 Solanum tuberosum HOM05D004763 ORTHO05D026177 3.3e-29 133.7 79 89.9
PGSC0003DMG400026817 Solanum tuberosum HOM05D004763 ORTHO05D026177 1.3e-28 131.7 81 86.4
Thecc.03G073800 Theobroma cacao HOM05D004763 ORTHO05D019264 3.4e-26 123.6 124 54.0
Sopen04g015550 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-26 122.9 96 74.0
Lsat_1_v5_gn_1_127201 Lactuca sativa HOM05D004763 ORTHO05D007492 1.0e-22 112.1 382 29.3
Solyc11g028310.3 Solanum lycopersicum HOM05D004763 ORTHO05D026177 8.2e-20 102.4 62 88.7
Lju1319A4T14 Lonicera japonica HOM05D004763 ORTHO05D019264 2.4e-19 100.9 62 80.6
arahy.Tifrunner.gnm1.ann1.50I1V9 Arachis hypogaea HOM05D004763 ORTHO05D014896 3.5e-18 97.1 68 76.5
arahy.Tifrunner.gnm1.ann1.F7UR4V Arachis hypogaea HOM05D004763 ORTHO05D014896 7.7e-18 95.9 68 75.0
arahy.Tifrunner.gnm1.ann1.G1IAFF Arachis hypogaea HOM05D004763 ORTHO05D014896 8.5e-17 92.4 82 62.2
Solyc12g036030.1 Solanum lycopersicum HOM05D004763 ORTHO05D026177 1.5e-16 91.7 104 53.8
Aa31LG8G7550 Aethionema arabicum HOM05D004763 ORTHO05D007492 4.2e-16 90.1 271 33.9
TWI60G1170 Tripterygium wilfordii HOM05D004763 ORTHO05D014896 1.4e-14 85.1 49 85.7
arahy.Tifrunner.gnm1.ann1.65KXHR Arachis hypogaea HOM05D004763 ORTHO05D014896 1.8e-14 84.7 49 87.8
PGSC0003DMG402017076 Solanum tuberosum HOM05D004763 ORTHO05D026177 9.7e-13 79.0 45 93.3
arahy.Tifrunner.gnm1.ann1.YT3XVJ Arachis hypogaea HOM05D012186 ORTHO05D009594 1.8e-11 74.7 98 51.0
Lsat_1_v5_gn_1_125620 Lactuca sativa HOM05D004763 ORTHO05D007492 4.1e-11 73.6 185 33.0
Actinidia06319 Actinidia chinensis HOM05D004763 ORTHO05D007492 2.7e-10 70.9 50 76.0
Solyc11g028340.3 Solanum lycopersicum HOM05D004763 ORTHO05D019264 2.7e-10 70.9 42 83.3
PGSC0003DMG400019106 Solanum tuberosum HOM05D004763 ORTHO05D007492 4.5e-10 70.1 37 86.5
Solyc11g028350.1 Solanum lycopersicum HOM05D004763 ORTHO05D019264 2.9e-09 67.4 40 82.5
Solyc11g028330.2 Solanum lycopersicum HOM05D004763 ORTHO05D019264 8.0e-07 59.3 35 82.9
Lsat_1_v5_gn_8_146221 Lactuca sativa HOM05D004763 ORTHO05D014896 1.0e-06 58.9 33 87.9
RcHm_v2.0_Chr3g0472751 Rosa chinensis HOM05D004763 ORTHO05D344474 1.4e-06 58.5 37 81.1
arahy.Tifrunner.gnm1.ann1.NZV0HQ Arachis hypogaea HOM05D004763 ORTHO05D014896 6.8e-06 56.2 33 87.9


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