Gene: PGSC0003DMG401029907
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG401029907
- Transcript Identifier PGSC0003DMT400076881
- Gene Type Coding gene
- Location ST4.03ch01 : 54479003-54482721 : negative
Gene Family Information
- ID HOM05D004763
- #Genes/#Species 154/95
- Phylogenetic origin
- ID ORTHO05D007492
- #Genes/#Species 130/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37441567
- id PGSC0003DMG401029907.v4.03
- uniprot M1CXJ5
Descriptions
- Description Type II DNA topoisomerase VI subunit B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000902 | IEA | GOA Database | cell morphogenesis | |
| GO:0007389 | IEA | GOA Database | pattern specification process | |
| GO:0010026 | IEA | GOA Database | trichome differentiation | |
| GO:0009741 | IEA | GOA Database | response to brassinosteroid | |
| GO:0042023 | IEA | GOA Database | DNA endoreduplication | |
| GO:0006265 | IEA | GOA Database | DNA topological change | |
| GO:0006265 | IEA | InterPro | DNA topological change |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G20780 |
| GO:0042802 | IEA | GOA Database | identical protein binding | |
| GO:0042803 | IEA | GOA Database | protein homodimerization activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003918 | IEA | GOA Database | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | |
| GO:0003918 | IEA | InterPro | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015935 | IBA | GOA Database | small ribosomal subunit | |
| GO:0005829 | IBA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.2.6.1.2 | Cell cycle organisation.DNA replication.endoreduplication.somatic DNA topoisomerase VI complex.subunit TOP6B |