Gene: Solyc01g014490.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g014490.4
  • Transcript Identifier Solyc01g014490.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 14012208-14027908 : negative

Gene Family Information

  • ID HOM05D004763
  • #Genes/#Species 154/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g014490.4.1
  • uniprot A0A3Q7EUH2
  • gene_id Solyc01g014490

Descriptions

  • Description DNA topoisomerase 6 subunit B (AHRD V3.3 *** A0A2I4GDF3_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010026
ISO
PLAZA Integrative Orthologytrichome differentiation AT3G20780
GO:0009741
ISO
PLAZA Integrative Orthologyresponse to brassinosteroid AT3G20780
GO:0007389
ISO
PLAZA Integrative Orthologypattern specification process AT3G20780
GO:0042023
ISO
PLAZA Integrative OrthologyDNA endoreduplication AT3G20780
GO:0000902
ISO
PLAZA Integrative Orthologycell morphogenesis AT3G20780
GO:0006265
IEA
GOA DatabaseDNA topological change
GO:0006265
IEA
InterProDNA topological change

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity Os09g0279600
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20780
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G20780
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003918
IEA
GOA DatabaseDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015935
IBA
GOA Databasesmall ribosomal subunit
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010979 Ribosomal protein S13-like, H2TH
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR003594 Histidine kinase/HSP90-like ATPase
IPR015320 DNA topoisomerase VI, subunit B, transducer
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR005734 DNA topoisomerase VI, subunit B
Mapman id Description
13.2.6.1.2 Cell cycle organisation.DNA replication.endoreduplication.somatic DNA topoisomerase VI complex.subunit TOP6B