Gene: Sopen04g015550
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g015550
- Transcript Identifier Sopen04g015550.1
- Gene Type Coding gene
- Location Spenn-ch04 : 32538137-32551164 : negative
Gene Family Information
- ID HOM05D000004
- #Genes/#Species 19584/91
- Phylogenetic origin
- ID ORTHO05D000002
- #Genes/#Species 15655/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen04g015550.1
Descriptions
- Description Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation. | topoisomerase 6 subunit B (TOP6B) | CONTAINS InterPro DOMAIN/s: DNA topoisomerase VI, subunit B, transducer , Ribosomal protein S5 domain 2-type fold , Ribosomal protein S5 domain 2-type fold, subgroup , ATPase-like, ATP-binding domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005162 | Retrotransposon gag domain |
| IPR000477 | Reverse transcriptase domain |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR041588 | Integrase zinc-binding domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR036397 | Ribonuclease H superfamily |
| Mapman id | Description |
|---|---|
| 13.2.6.1.2 | Cell cycle organisation.DNA replication.endoreduplication.somatic DNA topoisomerase VI complex.subunit TOP6B |