Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401005535 Solanum tuberosum HOM05D001053 ORTHO05D008021 4.4e-89 331.3 165 100.0
Solyc01g009120.3 Solanum lycopersicum HOM05D001053 ORTHO05D008021 5.0e-69 264.6 146 91.1
Sopen01g004600 Solanum pennellii HOM05D001053 ORTHO05D008021 7.3e-68 260.8 146 90.4
Nitab4.5_0003575g0030 Nicotiana tabacum HOM05D001053 ORTHO05D008021 3.2e-47 192.2 109 83.5
CAN.G102.6 Capsicum annuum HOM05D001053 ORTHO05D008021 8.9e-42 174.1 110 78.2
Peaxi162Scf00119g00944 Petunia axillaris HOM05D001053 ORTHO05D008021 3.5e-38 162.2 109 73.4
Cc07_g18770 Coffea canephora HOM05D001053 ORTHO05D008021 7.4e-20 101.3 116 49.1
QL10p043125 Quercus lobata HOM05D001053 ORTHO05D008021 1.6e-19 100.1 121 46.3
Dinv24384 Davidia involucrata HOM05D001053 ORTHO05D008021 1.4e-18 97.1 118 46.6
QL10p043184 Quercus lobata HOM05D001053 ORTHO05D008021 1.4e-18 97.1 121 46.3
QL10p043267 Quercus lobata HOM05D001053 ORTHO05D008021 1.4e-18 97.1 121 46.3
COL.COLO4_35764 Corchorus olitorius HOM05D001053 ORTHO05D008021 4.5e-17 92.0 118 44.9
CSS0018152 Camellia sinensis var. sinensis HOM05D001053 ORTHO05D008021 5.8e-17 91.7 112 45.5
CSS0040168 Camellia sinensis var. sinensis HOM05D001053 ORTHO05D008021 1.3e-16 90.5 111 45.0
SalBow1G2034 Salvia bowleyana HOM05D001053 ORTHO05D008021 2.9e-16 89.4 85 51.8
Duzib264G1089 Durio zibethinus HOM05D001053 ORTHO05D008021 4.9e-16 88.6 117 41.9
Duzib264G0077 Durio zibethinus HOM05D001053 ORTHO05D008021 6.4e-16 88.2 117 41.9
CiPaw.03G120300 Carya illinoinensis HOM05D001053 ORTHO05D008021 3.2e-15 85.9 110 42.7
Cpa.g.sc42.168 Carica papaya HOM05D001053 ORTHO05D008021 5.5e-15 85.1 101 45.5
Gorai.012G036200 Gossypium raimondii HOM05D001053 ORTHO05D008021 5.5e-15 85.1 132 39.4
TAR628G1683 Trochodendron aralioides HOM05D001053 ORTHO05D008021 9.3e-15 84.3 111 42.3
TWI79G0588 Tripterygium wilfordii HOM05D001053 ORTHO05D008021 1.2e-14 84.0 117 41.0
Ca_17631_v3 Cicer arietinum L. HOM05D001053 ORTHO05D008021 1.6e-14 83.6 118 41.5
Gohir.D04G031900 Gossypium hirsutum HOM05D001053 ORTHO05D008021 1.6e-14 83.6 117 41.0
Haze_25261 Corylus avellana HOM05D001053 ORTHO05D008021 2.1e-14 83.2 102 44.1
Sc19g0005860 Simmondsia chinensis HOM05D001053 ORTHO05D008021 2.7e-14 82.8 102 43.1
Gohir.A05G383400 Gossypium hirsutum HOM05D001053 ORTHO05D008021 6.0e-14 81.6 132 38.6
Psat7g045760 Pisum sativum HOM05D001053 ORTHO05D008021 6.0e-14 81.6 114 43.9
Thecc.01G134400 Theobroma cacao HOM05D001053 ORTHO05D008021 7.9e-14 81.3 80 52.5
Migut.H00692 Erythranthe guttata HOM05D001053 ORTHO05D008021 1.0e-13 80.9 65 56.9
MBI03_g20845_MAGBIO Magnolia biondii HOM05D001053 ORTHO05D008021 3.0e-13 79.3 94 48.9
Manes.12G156900 Manihot esculenta HOM05D001053 ORTHO05D008021 3.0e-13 79.3 89 47.2
GSVIVG01026467001 Vitis vinifera HOM05D001053 ORTHO05D008021 5.1e-13 78.6 115 41.7
EL10Ac6g15291 Beta vulgaris HOM05D001053 ORTHO05D008021 1.5e-12 77.0 65 58.5
Prupe.4G272300 Prunus persica HOM05D001053 ORTHO05D008021 1.5e-12 77.0 116 38.8
Atru.chr4.871 Acer truncatum HOM05D001053 ORTHO05D008021 2.5e-12 76.3 118 39.0
ECA240G4797 Erigeron canadensis HOM05D003483 ORTHO05D008021 2.5e-12 76.3 90 44.4
MD01G1005700 Malus domestica HOM05D001053 ORTHO05D008021 2.5e-12 76.3 112 41.1
Aa31sc146G20 Aethionema arabicum HOM05D001053 ORTHO05D008021 1.6e-11 73.6 62 56.5
A01p04800 Brassica napus HOM05D001053 ORTHO05D008021 2.1e-11 73.2 92 43.5
Ciclev10001184m.g Citrus clementina HOM05D001053 ORTHO05D008021 2.1e-11 73.2 117 38.5
Nn5g28508 Nelumbo nucifera HOM05D001053 ORTHO05D008021 2.1e-11 73.2 98 39.8
BcaC09g52163 Brassica carinata HOM05D001053 ORTHO05D008021 3.7e-11 72.4 103 38.8
BraA01t00463Z Brassica rapa HOM05D001053 ORTHO05D008021 3.7e-11 72.4 92 43.5
Lsat_1_v5_gn_2_37440 Lactuca sativa HOM05D001053 ORTHO05D008021 3.7e-11 72.4 87 44.8
PGR102G3106 Punica granatum HOM05D001053 ORTHO05D008021 6.2e-11 71.6 111 40.5
Ah.02g121650 Amaranthus hybridus HOM05D001053 ORTHO05D008021 1.1e-10 70.9 86 46.5
THA.LOC104819490 Tarenaya hassleriana HOM05D001053 ORTHO05D008021 1.1e-10 70.9 64 53.1
Carub.0007s0700 Capsella rubella HOM05D001053 ORTHO05D008021 1.8e-10 70.1 80 46.2
RcHm_v2.0_Chr2g0121851 Rosa chinensis HOM05D001053 ORTHO05D008021 1.8e-10 70.1 122 36.1
Medtr8g093800 Medicago truncatula HOM05D001053 ORTHO05D008021 2.4e-10 69.7 114 36.8
Sp7g31180 Schrenkiella parvula HOM05D001053 ORTHO05D008021 2.4e-10 69.7 92 41.3
Eucgr.J01293 Eucalyptus grandis HOM05D001053 ORTHO05D008021 3.1e-10 69.3 87 44.8
Glyma.05G192600 Glycine max HOM05D001053 ORTHO05D008021 4.0e-10 68.9 117 36.8
TPR.G37345 Trifolium pratense HOM05D001053 ORTHO05D008021 4.0e-10 68.9 51 62.7
C01p05210 Brassica napus HOM05D001053 ORTHO05D008021 5.3e-10 68.6 92 41.3
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 5.3e-10 68.6 92 41.3
Sabra05G0053500 Salix brachista HOM05D001053 ORTHO05D008021 5.3e-10 68.6 64 53.1
CARHR241550 Cardamine hirsuta HOM05D001053 ORTHO05D008021 9.0e-10 67.8 64 50.0
HanXRQChr14g0433381 Helianthus annuus HOM05D001053 ORTHO05D008021 9.0e-10 67.8 42 71.4
AT4G33470 Arabidopsis thaliana HOM05D001053 ORTHO05D008021 1.2e-09 67.4 64 50.0
FvH4_1g24510 Fragaria vesca HOM05D001053 ORTHO05D008021 1.2e-09 67.4 118 34.7
FAN19G0875 Fragaria x ananassa HOM05D001053 ORTHO05D008021 1.2e-09 67.4 118 34.7
Os12g0182700 Oryza sativa ssp. japonica HOM05D001053 ORTHO05D008021 1.2e-09 67.4 118 39.0
Actinidia06612 Actinidia chinensis HOM05D001053 ORTHO05D008021 1.5e-09 67.0 42 73.8
AUR62003584 Chenopodium quinoa HOM05D001053 ORTHO05D008021 1.5e-09 67.0 88 44.3
AL7G18080 Arabidopsis lyrata HOM05D001053 ORTHO05D008021 2.0e-09 66.6 84 41.7
Lj4g0011583 Lotus japonicus HOM05D001053 ORTHO05D008021 2.0e-09 66.6 54 59.3
Lalb_Chr16g0392561 Lupinus albus HOM05D001053 ORTHO05D008021 2.0e-09 66.6 59 54.2
arahy.Tifrunner.gnm1.ann1.JNKP0R Arachis hypogaea HOM05D001053 ORTHO05D008021 2.6e-09 66.2 74 47.3
arahy.Tifrunner.gnm1.ann1.YLDT1P Arachis hypogaea HOM05D001053 ORTHO05D008021 2.6e-09 66.2 74 47.3
Thhalv10025266m.g Eutrema salsugineum HOM05D001053 ORTHO05D008021 2.6e-09 66.2 64 48.4
DCAR_001205 Daucus carota HOM05D001053 ORTHO05D008021 3.4e-09 65.9 64 48.4
FAN28G2289 Fragaria x ananassa HOM05D001053 ORTHO05D008021 5.8e-09 65.1 98 36.7
unitig_899.g14678 Utricularia gibba HOM05D001053 ORTHO05D008021 7.6e-09 64.7 61 52.5
CANSAT56G3272 Cannabis sativa HOM05D001053 ORTHO05D008021 1.7e-08 63.5 64 48.4
Potri.005G064200 Populus trichocarpa HOM05D001053 ORTHO05D008021 2.9e-08 62.8 42 69.0
vmacro12791 Vaccinium macrocarpon HOM05D001053 ORTHO05D008021 2.9e-08 62.8 176 29.0
PSO170G2800 Papaver somniferum HOM05D001053 ORTHO05D008021 4.9e-08 62.0 56 55.4
VMungo0251G0496 Vigna mungo HOM05D001053 ORTHO05D008021 4.9e-08 62.0 67 49.3
Phvul.002G273200 Phaseolus vulgaris HOM05D001053 ORTHO05D008021 1.1e-07 60.8 64 50.0
Aqoxy5G02258 Aquilegia oxysepala HOM05D001053 ORTHO05D008021 1.4e-07 60.5 106 35.8
Pp3c21_17500 Physcomitrium patens HOM05D001053 ORTHO05D008021 1.4e-07 60.5 99 39.4
ClCG01G015340 Citrullus lanatus HOM05D001053 ORTHO05D008021 2.5e-07 59.7 77 42.9
Oeu058292.1 Olea europaea HOM05D001053 ORTHO05D008021 3.2e-07 59.3 32 81.2
MELO3C008064.2 Cucumis melo HOM05D001053 ORTHO05D008021 4.2e-07 58.9 75 44.0
SEGI_25913 Sequoiadendron giganteum HOM05D001053 ORTHO05D008021 4.2e-07 58.9 64 46.9
CsaV3_6G041560 Cucumis sativus L. HOM05D001053 ORTHO05D008021 5.5e-07 58.5 75 42.7
Zm00001eb148900 Zea mays HOM05D001053 ORTHO05D008021 9.3e-07 57.8 53 45.3
Sed0008132 Sechium edule HOM05D001053 ORTHO05D008021 1.2e-06 57.4 42 64.3
SMO241G0005 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-06 57.4 71 38.0
AagrBONN_evm.TU.Sc2ySwM_368.1571 Anthoceros agrestis HOM05D001053 ORTHO05D008021 1.6e-06 57.0 42 59.5
Lj1g0009434 Lotus japonicus HOM05D001053 ORTHO05D008021 1.6e-06 57.0 98 34.7
Nitab4.5_0000504g0020 Nicotiana tabacum HOM05D001053 ORTHO05D008021 3.5e-06 55.8 28 92.9
CBR_g34011 Chara braunii HOM05D001053 ORTHO05D008021 4.6e-06 55.5 42 61.9


User provided reference genes

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