Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 3.3e-131 471.9 263 100.0
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 2.0e-128 462.6 263 97.7
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 5.8e-128 461.1 263 97.7
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.1e-113 413.7 263 89.0
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 6.1e-109 397.9 263 85.9
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 2.2e-103 379.4 248 87.1
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 2.7e-101 372.5 263 83.7
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 1.0e-87 327.4 264 73.1
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 6.7e-84 314.7 263 68.4
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 5.3e-81 305.1 263 66.5
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 3.5e-80 302.4 264 64.8
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 2.5e-78 296.2 264 67.4
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 7.2e-78 294.7 263 66.9
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 3.6e-77 292.4 262 64.1
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 4.8e-74 282.0 263 65.0
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 4.1e-73 278.9 261 63.6
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 1.6e-72 276.9 263 60.1
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 2.7e-72 276.2 261 65.9
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.5e-72 275.8 262 63.4
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 5.9e-72 275.0 263 64.3
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 7.7e-72 274.6 262 63.0
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 7.7e-72 274.6 262 63.0
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 7.7e-72 274.6 262 63.0
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 1.3e-71 273.9 264 64.8
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 5.0e-71 271.9 264 62.1
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 1.1e-70 270.8 264 63.6
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 4.2e-70 268.9 262 62.2
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 4.2e-70 268.9 262 62.6
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 1.6e-69 266.9 295 55.9
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 3.6e-69 265.8 262 62.2
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 4.7e-69 265.4 262 61.1
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 6.8e-68 261.5 291 55.3
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 1.2e-67 260.8 261 59.4
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 4.4e-67 258.8 264 62.1
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 3.7e-66 255.8 265 58.9
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 1.1e-65 254.2 261 58.2
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.8e-65 253.4 260 59.2
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 1.6e-64 250.4 262 59.9
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 2.0e-64 250.0 257 56.4
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 5.9e-64 248.4 261 63.2
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.3e-63 247.3 261 59.8
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 6.6e-63 245.0 265 61.5
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 3.3e-62 242.7 263 60.5
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 3.3e-62 242.7 263 59.3
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 5.6e-62 241.9 265 60.4
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 2.1e-61 240.0 260 58.1
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 2.8e-61 239.6 262 59.2
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 2.8e-61 239.6 262 60.7
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 4.7e-61 238.8 262 58.8
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 4.7e-61 238.8 261 54.8
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 8.0e-61 238.0 262 60.3
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 1.4e-60 237.3 260 57.7
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 4.0e-60 235.7 265 58.5
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 5.2e-60 235.3 266 59.0
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.2e-59 234.2 262 59.2
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 3.4e-59 232.6 262 55.3
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 4.4e-59 232.3 260 56.2
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 4.4e-59 232.3 260 56.2
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 1.1e-57 227.6 262 56.9
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.1e-57 227.6 264 56.1
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 2.4e-57 226.5 265 56.2
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 4.1e-57 225.7 303 49.2
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 9.2e-57 224.6 262 56.9
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 3.5e-56 222.6 262 56.1
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 4.6e-56 222.2 261 54.8
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 6.0e-56 221.9 262 55.7
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.3e-55 220.7 261 54.8
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 2.3e-55 219.9 261 51.7
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 2.3e-55 219.9 273 52.7
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 8.6e-55 218.0 261 57.5
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 8.6e-55 218.0 264 54.9
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 1.9e-54 216.9 262 56.1
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 7.3e-54 214.9 260 55.0
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 2.1e-53 213.4 262 54.6
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 4.7e-53 212.2 260 56.5
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 1.8e-52 210.3 264 53.4
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 6.8e-52 208.4 263 54.0
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 1.5e-51 207.2 260 55.0
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.0e-51 206.8 263 55.5
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 2.6e-51 206.5 260 53.8
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 7.5e-51 204.9 261 53.6
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 2.2e-50 203.4 264 52.7
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 2.2e-50 203.4 261 55.2
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 5.4e-49 198.7 263 54.0
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 2.0e-48 196.8 257 51.4
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 6.0e-48 195.3 261 52.9
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 6.6e-47 191.8 303 48.5
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 1.1e-46 191.0 263 51.3
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 1.6e-45 187.2 267 50.6
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 8.3e-42 174.9 271 47.6
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 1.4e-41 174.1 215 54.4
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.1e-40 170.2 261 44.4
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 5.6e-38 162.2 298 42.3
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 1.8e-36 157.1 266 45.9
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 5.8e-35 152.1 253 41.9
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 8.4e-34 148.3 116 65.5
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.1e-33 147.9 288 41.7
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.9e-33 147.1 154 62.3
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 7.8e-32 141.7 217 51.2
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 2.5e-30 136.7 287 38.3
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.1e-29 133.7 194 47.9
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 2.8e-29 133.3 101 65.3
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.8e-28 130.6 194 46.9
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 5.2e-28 129.0 292 38.7
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 5.8e-27 125.6 215 47.4
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 7.6e-27 125.2 336 37.2
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 1.6e-24 117.5 151 58.3
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 3.9e-23 112.8 70 78.6
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 2.1e-21 107.1 70 70.0
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 9.0e-20 101.7 153 52.3
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.2e-18 97.1 215 44.2
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 6.4e-18 95.5 187 41.2
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.2e-16 91.3 194 39.7
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.1e-14 84.7 152 42.1
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.1e-14 84.7 152 42.1
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 8.1e-13 78.6 261 32.6
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 3.0e-07 60.1 120 41.7
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 5.1e-07 59.3 56 62.5


User provided reference genes

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