Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 5.8e-217 757.3 385 100.0
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 5.4e-207 724.2 385 95.3
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 4.6e-206 721.1 385 94.8
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 2.1e-166 589.3 385 81.0
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.5e-156 555.8 375 78.4
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 7.4e-148 527.7 306 85.0
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 2.3e-112 409.8 388 60.3
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 1.0e-109 401.0 382 58.9
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 3.0e-109 399.4 394 56.9
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 1.7e-107 393.7 377 58.9
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 2.7e-105 386.3 382 57.6
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 3.9e-104 382.5 386 54.9
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 5.0e-104 382.1 403 54.3
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 1.9e-103 380.2 386 54.9
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 2.5e-103 379.8 365 58.6
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 9.5e-103 377.9 369 55.0
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 2.1e-102 376.7 382 56.0
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 6.8e-101 371.7 399 53.1
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 1.5e-100 370.5 376 54.5
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 2.6e-100 369.8 383 55.6
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.4e-100 369.4 380 55.0
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 3.4e-100 369.4 392 54.8
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 7.5e-100 368.2 387 53.5
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 2.4e-98 363.2 370 53.8
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 2.7e-97 359.8 369 53.1
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 7.8e-97 358.2 390 52.1
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 3.0e-96 356.3 385 51.9
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 3.9e-96 355.9 376 53.7
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 8.6e-96 354.8 369 56.1
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 1.5e-95 354.0 383 52.2
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 1.9e-95 353.6 368 55.7
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 2.5e-95 353.2 376 52.7
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 4.3e-95 352.4 378 52.1
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 5.6e-95 352.1 382 54.5
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.1e-94 350.1 364 56.0
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 3.6e-94 349.4 372 52.2
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 3.6e-94 349.4 373 52.5
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 8.1e-94 348.2 377 52.5
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 8.1e-94 348.2 370 53.8
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.1e-93 347.8 378 51.6
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 1.1e-93 347.8 384 51.6
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.4e-93 347.4 382 54.2
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 4.0e-93 345.9 384 49.7
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 8.9e-93 344.7 378 49.5
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 8.9e-93 344.7 394 49.5
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 1.5e-92 344.0 392 49.7
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.5e-92 344.0 375 49.9
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 2.0e-92 343.6 378 51.1
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 2.6e-92 343.2 369 53.1
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 2.6e-92 343.2 382 52.4
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 3.4e-92 342.8 381 51.7
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 4.4e-92 342.4 395 49.9
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 4.4e-92 342.4 385 53.0
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 5.8e-92 342.0 380 52.1
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 9.9e-92 341.3 379 50.9
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 1.3e-91 340.9 364 53.0
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.3e-91 340.9 394 49.0
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 2.2e-91 340.1 370 53.5
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 2.2e-91 340.1 377 52.8
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 2.9e-91 339.7 379 51.5
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 3.7e-91 339.3 371 53.1
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 6.4e-91 338.6 382 52.1
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.4e-90 337.4 381 51.2
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 7.1e-90 335.1 377 50.7
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 7.1e-90 335.1 389 49.9
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 9.2e-90 334.7 370 51.9
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 1.6e-89 334.0 370 53.8
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 2.1e-89 333.6 334 55.7
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.7e-89 333.2 386 50.0
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 1.1e-87 327.8 369 50.9
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 1.5e-87 327.4 369 51.2
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 2.5e-87 326.6 369 51.2
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 5.6e-87 325.5 361 49.9
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.6e-86 323.9 377 50.4
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.1e-86 323.6 203 81.3
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 2.1e-86 323.6 369 49.1
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.1e-85 321.2 369 49.6
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.1e-85 321.2 369 49.6
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.8e-85 320.5 362 51.1
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 7.6e-84 315.1 371 49.1
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 2.4e-82 310.1 313 57.2
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 2.7e-81 306.6 372 47.3
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 3.5e-81 306.2 366 50.8
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 7.3e-79 298.5 454 41.4
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 6.4e-75 285.4 382 47.1
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 1.4e-74 284.3 274 53.3
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 2.3e-72 276.9 391 42.7
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 3.3e-71 273.1 408 41.9
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 5.1e-64 249.2 571 32.7
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 4.3e-63 246.1 331 41.4
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.6e-62 244.2 293 48.1
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 4.6e-57 226.1 270 45.9
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 1.1e-55 221.5 240 51.7
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.4e-50 204.5 310 36.5
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 2.5e-50 203.8 225 51.6
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.5e-47 193.7 194 58.2
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 7.4e-47 192.2 391 35.3
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.6e-46 191.0 202 54.5
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 6.3e-46 189.1 365 35.6
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.5e-44 184.5 113 76.1
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.6e-44 183.7 179 56.4
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.7e-38 164.5 156 55.8
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 2.5e-34 150.6 198 44.4
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 2.3e-32 144.1 190 41.6
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 1.7e-30 137.9 113 61.1
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 2.9e-27 127.1 142 42.3
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 6.5e-27 125.9 249 35.7
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 2.6e-23 114.0 132 53.8
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 5.7e-23 112.8 147 42.9
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.2e-11 74.3 80 40.0


User provided reference genes

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