Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012376 Solanum tuberosum HOM05D003939 ORTHO05D005979 2.0e-275 951.8 478 100.0
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 1.0e-263 912.9 479 96.7
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 2.2e-258 895.2 479 95.2
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 8.7e-231 803.5 475 86.3
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 3.1e-220 768.5 475 83.2
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 1.2e-211 740.0 475 79.6
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 7.7e-211 737.3 477 80.1
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 2.9e-165 585.9 480 65.6
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 2.3e-162 576.2 487 65.3
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 3.9e-162 575.5 482 63.1
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 6.8e-159 564.7 478 64.2
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 8.9e-159 564.3 502 60.6
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 4.9e-157 558.5 483 62.7
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 1.9e-156 556.6 482 61.8
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 1.9e-156 556.6 496 60.3
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 2.4e-156 556.2 496 59.9
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 3.2e-156 555.8 496 59.3
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 3.2e-156 555.8 449 65.5
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 1.0e-154 550.8 496 61.1
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 1.5e-153 547.0 439 64.7
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 4.7e-152 542.0 463 60.5
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 3.1e-151 539.3 508 57.5
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 3.1e-151 539.3 487 63.7
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 4.0e-151 538.9 499 58.5
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 1.5e-150 537.0 508 57.3
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 2.6e-150 536.2 500 60.0
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 4.4e-150 535.4 497 57.3
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 4.4e-150 535.4 503 59.0
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 1.3e-149 533.9 496 58.9
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 1.3e-149 533.9 484 60.3
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 1.7e-149 533.5 476 59.2
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 1.7e-149 533.5 483 60.2
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 2.9e-149 532.7 495 59.6
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 4.9e-149 531.9 504 57.9
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 1.4e-148 530.4 492 59.1
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 4.1e-148 528.9 478 60.9
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 5.4e-148 528.5 495 57.2
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 7.1e-148 528.1 508 56.7
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 9.2e-148 527.7 500 57.8
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 6.0e-147 525.0 500 58.2
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 1.3e-146 523.9 503 56.9
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 7.3e-145 518.1 505 58.2
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 2.8e-144 516.2 502 58.2
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.8e-144 516.2 502 58.2
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 6.2e-144 515.0 500 58.4
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 8.1e-144 514.6 410 65.9
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 4.0e-143 512.3 502 57.8
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 6.8e-143 511.5 503 56.7
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 6.8e-143 511.5 509 57.0
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 2.6e-142 509.6 446 59.9
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 7.6e-142 508.1 451 61.0
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 9.9e-142 507.7 502 57.6
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 1.3e-141 507.3 497 56.1
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 1.3e-141 507.3 513 57.1
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 4.9e-141 505.4 517 54.5
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 6.4e-141 505.0 534 52.8
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 1.4e-140 503.8 499 54.7
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 4.1e-140 502.3 466 57.3
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 9.2e-140 501.1 452 60.8
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 9.2e-140 501.1 495 57.6
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 2.1e-139 500.0 499 54.3
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 3.5e-139 499.2 500 56.8
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 3.5e-139 499.2 512 53.1
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 1.3e-138 497.3 495 54.5
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 1.3e-138 497.3 501 55.1
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 2.3e-138 496.5 499 56.5
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 3.0e-138 496.1 468 56.8
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 3.0e-138 496.1 500 54.4
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 3.0e-138 496.1 500 54.4
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.1e-137 494.2 482 57.1
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 1.9e-137 493.4 434 61.5
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 3.3e-137 492.7 503 54.9
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 9.6e-137 491.1 498 55.6
Glyma.19G029000 Glycine max HOM05D003939 ORTHO05D005979 1.6e-136 490.3 498 55.6
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 2.1e-136 490.0 498 55.2
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 2.1e-136 490.0 498 55.2
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 2.1e-136 490.0 499 56.7
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 4.7e-136 488.8 462 56.9
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 6.2e-136 488.4 466 56.4
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 8.1e-136 488.0 467 57.8
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 5.2e-135 485.3 467 55.9
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 6.8e-135 485.0 461 55.5
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 1.5e-134 483.8 461 55.7
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 2.0e-134 483.4 461 55.7
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 2.0e-134 483.4 485 55.3
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 2.6e-134 483.0 496 54.6
CDE04G2810 Ceratophyllum demersum HOM05D003939 ORTHO05D005979 4.4e-134 482.3 471 57.1
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 8.4e-133 478.0 516 54.3
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 8.4e-133 478.0 507 54.0
CSS0005126 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 2.8e-128 463.0 447 58.4
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 1.3e-122 444.1 498 52.8
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 2.0e-118 430.3 434 54.8
CSS0039149 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.1e-116 424.5 450 54.4
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 2.7e-115 419.9 490 51.4
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 3.3e-113 412.9 441 51.5
Hma1.2p1_0481F.1_g162010 Hydrangea macrophylla HOM05D003939 ORTHO05D005979 2.6e-110 403.3 370 58.6
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 7.6e-110 401.7 497 48.1
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 2.5e-108 396.7 506 47.4
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 5.7e-105 385.6 450 48.9
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 8.2e-104 381.7 496 47.6
SEGI_06328 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 8.2e-104 381.7 413 51.1
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 4.5e-102 375.9 526 47.0
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 1.7e-101 374.0 575 42.1
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 1.9e-100 370.5 347 57.6
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 6.1e-99 365.5 370 53.5
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 3.7e-96 356.3 432 44.9
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 4.8e-96 355.9 465 46.2
Psat0s5863g0080 Pisum sativum HOM05D003939 ORTHO05D005979 7.7e-94 348.6 297 62.3
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 1.4e-79 301.2 442 41.2
SEGI_32509 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 1.8e-71 274.2 252 56.7
Psat0s5863g0040 Pisum sativum HOM05D003939 ORTHO05D005979 3.1e-71 273.5 236 61.9
Psat0s9359g0040 Pisum sativum HOM05D003939 ORTHO05D005979 5.9e-46 189.5 186 55.9
CSS0004390 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.6e-38 164.9 257 40.9
CiPaw.03G089700 Carya illinoinensis HOM05D003939 ORTHO05D005979 6.0e-38 162.9 150 55.3
HPP92_012255 Vanilla planifolia HOM05D003939 ORTHO05D005979 4.3e-36 156.8 417 31.4
MCO01G540 Micromonas commoda HOM05D003939 ORTHO05D005979 1.5e-33 148.3 351 29.1
DCAR_026524 Daucus carota HOM05D003939 ORTHO05D005979 1.7e-21 108.2 73 71.2
Cpa.g.sc14.167 Carica papaya HOM05D003939 ORTHO05D005979 1.5e-20 105.1 109 52.3
MELO3C001621.2 Cucumis melo HOM05D003939 ORTHO05D005979 2.4e-18 97.8 72 65.3
TPR.G3973 Trifolium pratense HOM05D003939 ORTHO05D005979 8.9e-18 95.9 174 33.9
TAR629G0495 Trochodendron aralioides HOM05D003939 ORTHO05D005979 2.0e-17 94.7 68 73.5
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 3.8e-16 90.5 48 91.7
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 1.1e-15 89.0 48 89.6
MELO3C001721.2 Cucumis melo HOM05D003939 ORTHO05D005979 5.1e-13 80.1 61 63.9
EL10Ac2g03124 Beta vulgaris HOM05D005544 ORTHO05D007303 8.1e-11 72.8 117 40.2
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 1.3e-08 65.5 82 45.1


User provided reference genes

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