Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002893 Solanum tuberosum HOM05D007201 ORTHO05D009122 4.4e-202 708.0 426 100.0
Solyc12g009390.2 Solanum lycopersicum HOM05D007201 ORTHO05D009122 1.1e-176 623.6 430 89.8
Sopen12g004380 Solanum pennellii HOM05D007201 ORTHO05D009122 9.0e-171 604.0 419 90.9
Nitab4.5_0000073g0490 Nicotiana tabacum HOM05D007201 ORTHO05D009122 2.2e-129 466.5 435 70.3
Peaxi162Scf00047g02450 Petunia axillaris HOM05D007201 ORTHO05D009122 1.3e-121 440.7 413 60.8
Nitab4.5_0004827g0030 Nicotiana tabacum HOM05D007201 ORTHO05D009122 2.1e-111 406.8 355 73.8
CAN.G1591.3 Capsicum annuum HOM05D007201 ORTHO05D009122 6.6e-97 358.6 267 80.9
Rhsim03G0269700 Rhododendron simsii HOM05D007201 ORTHO05D009122 2.2e-84 317.0 434 47.7
CSS0027843 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 5.4e-83 312.4 443 46.7
Cc06_g23490 Coffea canephora HOM05D007201 ORTHO05D009122 2.3e-81 307.0 473 45.2
Manes.02G222200 Manihot esculenta HOM05D007201 ORTHO05D009122 7.3e-80 302.0 435 49.0
TAR626G0209 Trochodendron aralioides HOM05D007201 ORTHO05D009122 2.1e-79 300.4 434 43.8
Nn8g41282 Nelumbo nucifera HOM05D007201 ORTHO05D009122 3.6e-79 299.7 422 46.9
Thecc.09G202300 Theobroma cacao HOM05D007201 ORTHO05D009122 1.8e-78 297.4 437 47.1
Actinidia03796 Actinidia chinensis HOM05D007201 ORTHO05D009122 4.0e-78 296.2 451 46.8
Lju50A20G7 Lonicera japonica HOM05D007201 ORTHO05D009122 6.4e-76 288.9 444 48.4
MELO3C010035.2 Cucumis melo HOM05D007201 ORTHO05D009122 7.1e-75 285.4 436 44.3
Gorai.012G009900 Gossypium raimondii HOM05D007201 ORTHO05D009122 2.1e-74 283.9 441 49.2
Gohir.D04G008200 Gossypium hirsutum HOM05D007201 ORTHO05D009122 6.0e-74 282.3 427 47.8
CsaV3_1G044360 Cucumis sativus L. HOM05D007201 ORTHO05D009122 3.0e-73 280.0 433 44.3
COL.COLO4_09000 Corchorus olitorius HOM05D007201 ORTHO05D009122 3.9e-73 279.6 448 45.5
PSO339G5324 Papaver somniferum HOM05D007201 ORTHO05D009122 8.7e-73 278.5 441 46.5
Sc10g0006090 Simmondsia chinensis HOM05D007201 ORTHO05D009122 1.9e-72 277.3 436 44.0
MD04G1000600 Malus domestica HOM05D007201 ORTHO05D009122 3.3e-72 276.6 439 43.7
Haze_21242 Corylus avellana HOM05D007201 ORTHO05D009122 4.8e-71 272.7 441 42.6
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 6.2e-71 272.3 451 43.2
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 1.1e-70 271.6 433 45.3
Cfa012872 Carpinus fangiana HOM05D007201 ORTHO05D009122 1.4e-70 271.2 446 42.8
CiPaw.15G000100 Carya illinoinensis HOM05D007201 ORTHO05D009122 5.3e-70 269.2 443 42.4
Sabra06G0061200 Salix brachista HOM05D007201 ORTHO05D009122 5.3e-70 269.2 492 42.3
Potri.006G081100 Populus trichocarpa HOM05D007201 ORTHO05D009122 9.0e-70 268.5 474 43.5
Atru.chr7.298 Acer truncatum HOM05D007201 ORTHO05D009122 4.5e-69 266.2 432 41.4
Ciclev10008517m.g Citrus clementina HOM05D007201 ORTHO05D009122 2.2e-68 263.8 427 42.4
FvH4_4g00131 Fragaria vesca HOM05D007201 ORTHO05D009122 2.9e-68 263.5 435 40.2
Hund22525 Selenicereus undatus HOM05D007201 ORTHO05D009122 3.8e-68 263.1 436 44.5
ECA234G1264 Erigeron canadensis HOM05D007201 ORTHO05D009122 6.4e-68 262.3 450 40.7
Prupe.1G000600 Prunus persica HOM05D007201 ORTHO05D009122 8.4e-68 261.9 447 42.1
GSVIVG01034266001 Vitis vinifera HOM05D007201 ORTHO05D009122 8.4e-68 261.9 425 51.1
QL11p005700 Quercus lobata HOM05D007201 ORTHO05D009122 1.9e-67 260.8 445 40.0
RcHm_v2.0_Chr4g0384751 Rosa chinensis HOM05D007201 ORTHO05D009122 9.3e-67 258.5 437 41.4
HanXRQChr10g0309261 Helianthus annuus HOM05D007201 ORTHO05D009122 2.3e-65 253.8 302 52.3
HPP92_017373 Vanilla planifolia HOM05D007201 ORTHO05D009122 2.3e-65 253.8 442 43.9
SGA_v2.0_scaffold21G09583 Striga asiatica HOM05D007201 ORTHO05D009122 1.9e-64 250.8 498 39.0
FAN12G0236 Fragaria x ananassa HOM05D007201 ORTHO05D009122 2.5e-64 250.4 431 39.2
Lj3g0009807 Lotus japonicus HOM05D007201 ORTHO05D009122 9.6e-64 248.4 448 42.0
vmacro22702 Vaccinium macrocarpon HOM05D007201 ORTHO05D009122 6.2e-63 245.7 542 36.2
Dinv26498 Davidia involucrata HOM05D007201 ORTHO05D009122 1.8e-62 244.2 437 42.6
VMungo1127G0228 Vigna mungo HOM05D007201 ORTHO05D009122 1.8e-62 244.2 444 41.9
arahy.Tifrunner.gnm1.ann1.X4HTYC Arachis hypogaea HOM05D007201 ORTHO05D009122 5.3e-62 242.7 462 43.9
Lsat_1_v5_gn_5_80700 Lactuca sativa HOM05D007201 ORTHO05D009122 5.3e-62 242.7 441 39.0
arahy.Tifrunner.gnm1.ann1.G7GJBK Arachis hypogaea HOM05D007201 ORTHO05D009122 2.6e-61 240.4 460 43.5
Aqoxy7G02518 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 2.9e-60 236.9 457 37.4
Glyma.11G109000 Glycine max HOM05D007201 ORTHO05D009122 2.9e-60 236.9 440 40.2
Phvul.011G018600 Phaseolus vulgaris HOM05D007201 ORTHO05D009122 2.9e-60 236.9 437 39.4
Glyma.12G016400 Glycine max HOM05D007201 ORTHO05D009122 1.1e-59 235.0 433 40.9
TPR.G28027 Trifolium pratense HOM05D007201 ORTHO05D009122 3.2e-59 233.4 454 43.8
PGR142G4385 Punica granatum HOM05D007201 ORTHO05D009122 1.2e-58 231.5 425 43.3
Carub.0002s2218 Capsella rubella HOM05D007201 ORTHO05D009122 2.3e-57 227.3 433 41.1
CANSAT25G2467 Cannabis sativa HOM05D007201 ORTHO05D009122 1.9e-56 224.2 239 51.0
Eucgr.C00055 Eucalyptus grandis HOM05D007201 ORTHO05D009122 2.8e-55 220.3 439 39.6
Cpa.g.sc46.114 Carica papaya HOM05D007201 ORTHO05D009122 9.0e-54 215.3 459 38.6
SHI24431 Sapria himalayana HOM05D007201 ORTHO05D009122 9.0e-54 215.3 312 43.3
FAN12G1512 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.2e-53 214.9 219 54.3
Psat7g169960 Pisum sativum HOM05D007201 ORTHO05D009122 1.5e-53 214.5 438 38.8
THA.LOC104809224 Tarenaya hassleriana HOM05D007201 ORTHO05D009122 8.4e-52 208.8 435 43.9
EL10Ac2g03602 Beta vulgaris HOM05D007201 ORTHO05D009122 1.1e-51 208.4 460 42.4
Lalb_Chr19g0140031 Lupinus albus HOM05D007201 ORTHO05D009122 4.2e-51 206.5 420 41.2
Medtr4g078160 Medicago truncatula HOM05D007201 ORTHO05D009122 1.2e-50 204.9 444 40.3
CSS0037159 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 3.5e-50 203.4 352 38.9
Aqoxy37s001 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 1.0e-49 201.8 293 43.0
unitig_8.g3542 Utricularia gibba HOM05D007201 ORTHO05D009122 1.0e-49 201.8 426 39.2
A07p40900 Brassica napus HOM05D007201 ORTHO05D009122 3.9e-49 199.9 438 47.0
Duzib168G1263 Durio zibethinus HOM05D007201 ORTHO05D009122 6.7e-49 199.1 434 42.6
C06p49330 Brassica napus HOM05D007201 ORTHO05D009122 1.1e-48 198.4 441 44.9
Thhalv10018711m.g Eutrema salsugineum HOM05D007201 ORTHO05D009122 1.1e-48 198.4 440 38.4
AL2G35270 Arabidopsis lyrata HOM05D007201 ORTHO05D009122 1.5e-48 198.0 488 36.9
AUR62027959 Chenopodium quinoa HOM05D007201 ORTHO05D009122 1.5e-48 198.0 221 53.4
CARHR068690 Cardamine hirsuta HOM05D007201 ORTHO05D009122 5.7e-48 196.1 219 53.4
BraA07t31630Z Brassica rapa HOM05D007201 ORTHO05D009122 1.6e-47 194.5 436 43.3
CDE04G0352 Ceratophyllum demersum HOM05D007201 ORTHO05D009122 2.8e-47 193.7 403 38.5
Sp5g30480 Schrenkiella parvula HOM05D007201 ORTHO05D009122 8.2e-47 192.2 469 39.9
BcaC08g47362 Brassica carinata HOM05D007201 ORTHO05D009122 1.2e-45 188.3 441 44.4
AT1G75340 Arabidopsis thaliana HOM05D007201 ORTHO05D009122 2.0e-45 187.6 221 50.7
Aa31LG4G5550 Aethionema arabicum HOM05D007201 ORTHO05D009122 2.6e-45 187.2 218 54.6
CSS0027553 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 2.2e-44 184.1 322 40.4
ATR0626G320 Amborella trichopoda HOM05D007201 ORTHO05D009122 2.9e-44 183.7 439 34.2
FAN22G0406 Fragaria x ananassa HOM05D007201 ORTHO05D009122 6.5e-44 182.6 431 34.1
SEGI_05170 Sequoiadendron giganteum HOM05D007201 ORTHO05D009122 8.5e-44 182.2 436 34.4
BolC6t39968H Brassica oleracea HOM05D007201 ORTHO05D009122 2.5e-43 180.6 455 42.6
Zm00001eb227240 Zea mays HOM05D007201 ORTHO05D009122 4.6e-42 176.4 458 34.5
Os06g0704300 Oryza sativa ssp. japonica HOM05D007201 ORTHO05D009122 3.7e-39 166.8 459 33.3
Migut.L01609 Erythranthe guttata HOM05D007201 ORTHO05D009122 2.0e-32 144.4 416 34.6
Oeu000954.1 Olea europaea HOM05D007201 ORTHO05D009122 4.1e-30 136.7 284 35.9
FAN17G0247 Fragaria x ananassa HOM05D007201 ORTHO05D009122 5.0e-28 129.8 94 64.9
Pp3c7_12210 Physcomitrium patens HOM05D007201 ORTHO05D009122 2.1e-26 124.4 421 28.3
Mapoly0005s0044 Marchantia polymorpha HOM05D007201 ORTHO05D009122 5.7e-24 116.3 429 31.9
AagrBONN_evm.TU.Sc2ySwM_117.2509 Anthoceros agrestis HOM05D007201 ORTHO05D009122 4.0e-17 93.6 343 32.1
CSS0018491 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.5e-16 91.7 89 66.3
CSS0038290 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.7e-15 88.2 88 64.8
CSS0006520 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.1e-14 85.5 62 62.9
CSS0048863 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.1e-14 85.5 62 62.9
Gohir.A05G407400 Gossypium hirsutum HOM05D007201 ORTHO05D009122 1.1e-14 85.5 273 36.6
CBR_g15955 Chara braunii HOM05D007201 ORTHO05D009122 1.8e-14 84.7 224 33.0
ClCG03G010480 Citrullus lanatus HOM05D007201 ORTHO05D009122 7.2e-11 72.8 252 32.1
CSS0012149 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 4.7e-10 70.1 48 64.6
CSS0032596 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 4.7e-10 70.1 48 64.6
Sed0005629 Sechium edule HOM05D007201 ORTHO05D009122 2.6e-08 64.3 95 40.0
Cre06.g254700 Chlamydomonas reinhardtii HOM05D007201 ORTHO05D009122 1.7e-07 61.6 71 38.0


User provided reference genes

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