Gene: PGSC0003DMG400002893

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400002893
  • Transcript Identifier PGSC0003DMT400007502
  • Gene Type Coding gene
  • Location ST4.03ch12 : 3012461-3019575 : positive

Gene Family Information

  • ID HOM05D007201
  • #Genes/#Species 109/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37445629
  • id PGSC0003DMG400002893.v4.03
  • uniprot M0ZT36

Descriptions

  • Description Zinc finger (CCCH-type) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
GOA Databaseprotein ubiquitination
GO:1900458
ISO
PLAZA Integrative Orthologynegative regulation of brassinosteroid mediated signaling pathway Os06g0704300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G75340
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Os06g0704300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G75340
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os06g0704300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000571 Zinc finger, CCCH-type
IPR045072 MKRN-like
IPR036855 Zinc finger, CCCH-type superfamily
Mapman id Description
23.5.1.1.7.2 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.nucleoporin (CG1)