Gene: COL.COLO4_09000

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_09000
  • Transcript Identifier COL.rna7797
  • Gene Type Coding gene
  • Location AWUE01014083.1 : 5522-9902 : negative

Gene Family Information

  • ID HOM05D007201
  • #Genes/#Species 109/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna7797
  • GenBank OMP05181.1
  • id gene8972
  • gene_name COLO4_09000
  • uniprot A0A1R3KDK8

Descriptions

  • Description Zinc finger, CCCH-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900458
ISO
PLAZA Integrative Orthologynegative regulation of brassinosteroid mediated signaling pathway Os06g0704300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G75340
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Os06g0704300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G75340
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os06g0704300
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os06g0704300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036855 Zinc finger, CCCH-type superfamily
IPR000571 Zinc finger, CCCH-type
IPR045072 MKRN-like
Mapman id Description
23.5.1.1.7.2 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.nucleoporin (CG1)