Gene: Sopen12g004380

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g004380
  • Transcript Identifier Sopen12g004380.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 2943607-2950550 : negative

Gene Family Information

  • ID HOM05D007201
  • #Genes/#Species 109/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g004380.1

Descriptions

  • Description Zinc finger C-x8-C-x5-C-x3-H type family protein | FUNCTIONS IN: zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900458
ISO
PLAZA Integrative Orthologynegative regulation of brassinosteroid mediated signaling pathway Os06g0704300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G75340
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Os06g0704300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G75340
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os06g0704300
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os06g0704300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045072 MKRN-like
IPR000571 Zinc finger, CCCH-type
Mapman id Description
23.5.1.1.7.2 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.nucleoporin (CG1)