Gene: FAN12G1512
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN12G1512
- Transcript Identifier FAN12G1512.1
- Gene Type Coding gene
- Location Fvb4-3 : 31877897-31884244 : negative
Gene Family Information
- ID HOM05D007201
- #Genes/#Species 109/89
- Phylogenetic origin
- ID ORTHO05D009122
- #Genes/#Species 109/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb4-3-augustus-gene-318.55.v1.0.a1
- pacid 50476016
Descriptions
- Description PF00560//PF00642//PF08263//PF13855 - Leucine Rich Repeat (LRR_1) // Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1900458 | ISO | PLAZA Integrative Orthology | negative regulation of brassinosteroid mediated signaling pathway | Os06g0704300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | Os06g0704300 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT1G75340 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | Os06g0704300 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | Os06g0704300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR036855 | Zinc finger, CCCH-type superfamily |
| IPR003591 | Leucine-rich repeat, typical subtype |
| IPR001611 | Leucine-rich repeat |
| IPR041367 | E3 ligase, CCCH-type zinc finger |
| IPR013210 | Leucine-rich repeat-containing N-terminal, plant-type |
| IPR000571 | Zinc finger, CCCH-type |
| Mapman id | Description |
|---|---|
| 21.4.1.3.2 | Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.extensin activities.LRR-domain extensin |
| 23.5.1.1.7.2 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.nucleoporin (CG1) |