Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 6.4e-79 297.4 150 100.0
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 4.8e-26 121.7 133 57.1
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 6.9e-25 117.9 138 51.4
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 1.2e-24 117.1 137 50.4
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 3.4e-24 115.5 120 55.8
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 7.6e-24 114.4 138 50.0
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 2.2e-23 112.8 138 50.0
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 2.2e-23 112.8 138 50.0
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 2.2e-23 112.8 130 51.5
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 8.4e-23 110.9 131 51.1
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 1.1e-22 110.5 138 48.6
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 2.5e-22 109.4 136 47.8
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 3.2e-22 109.0 136 47.8
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 3.2e-22 109.0 131 51.1
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 4.2e-22 108.6 130 50.8
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 4.2e-22 108.6 130 50.0
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 7.1e-22 107.8 130 49.2
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 7.1e-22 107.8 133 49.6
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 7.1e-22 107.8 131 50.4
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 9.3e-22 107.5 131 49.6
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 9.3e-22 107.5 131 49.6
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 1.2e-21 107.1 131 49.6
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 1.6e-21 106.7 136 47.1
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 2.1e-21 106.3 131 48.9
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 2.1e-21 106.3 130 50.0
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 2.7e-21 105.9 131 49.6
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 3.5e-21 105.5 133 48.9
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 3.5e-21 105.5 133 48.9
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 3.5e-21 105.5 130 47.7
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 4.6e-21 105.1 133 48.1
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 7.9e-21 104.4 131 48.9
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 7.9e-21 104.4 120 52.5
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 7.9e-21 104.4 118 51.7
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.0e-20 104.0 129 48.8
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 1.3e-20 103.6 131 48.1
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 1.3e-20 103.6 131 48.1
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 1.3e-20 103.6 131 48.1
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 1.8e-20 103.2 131 48.1
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 1.8e-20 103.2 129 48.1
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 2.3e-20 102.8 125 48.8
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 2.3e-20 102.8 120 50.8
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 3.0e-20 102.4 129 47.3
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 3.0e-20 102.4 130 48.5
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 3.9e-20 102.1 131 47.3
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 3.9e-20 102.1 131 48.1
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 3.9e-20 102.1 120 49.2
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 5.1e-20 101.7 131 47.3
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 5.1e-20 101.7 137 46.0
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 6.7e-20 101.3 131 46.6
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 1.1e-19 100.5 126 46.8
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 1.1e-19 100.5 126 46.8
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 1.1e-19 100.5 131 48.1
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 1.1e-19 100.5 129 47.3
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 1.1e-19 100.5 127 48.8
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 1.1e-19 100.5 120 48.3
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 1.1e-19 100.5 124 49.2
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 1.5e-19 100.1 120 48.3
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 1.5e-19 100.1 118 50.0
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 1.5e-19 100.1 125 50.4
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 1.5e-19 100.1 130 45.4
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 1.9e-19 99.8 118 47.5
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 1.9e-19 99.8 129 48.8
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 1.9e-19 99.8 130 46.2
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 3.3e-19 99.0 119 48.7
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 3.3e-19 99.0 120 47.5
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 3.3e-19 99.0 130 46.9
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 4.3e-19 98.6 130 45.4
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 4.3e-19 98.6 118 49.2
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 4.3e-19 98.6 119 47.9
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 5.7e-19 98.2 120 48.3
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 7.4e-19 97.8 130 45.4
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 7.4e-19 97.8 130 45.4
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 7.4e-19 97.8 130 45.4
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 7.4e-19 97.8 118 49.2
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 7.4e-19 97.8 126 47.6
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 9.7e-19 97.4 120 50.8
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 9.7e-19 97.4 130 44.6
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 1.3e-18 97.1 119 48.7
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 1.3e-18 97.1 130 45.4
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 1.6e-18 96.7 129 46.5
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 1.6e-18 96.7 130 45.4
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 1.6e-18 96.7 119 47.9
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 2.2e-18 96.3 130 44.6
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 1.1e-17 94.0 118 47.5
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 1.4e-17 93.6 119 47.1
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 1.8e-17 93.2 117 47.9
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 1.8e-17 93.2 119 47.1
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 1.8e-17 93.2 118 49.2
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 3.1e-17 92.4 126 47.6
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 4.1e-17 92.0 124 44.4
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 5.3e-17 91.7 129 45.7
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 6.9e-17 91.3 136 41.9
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 1.2e-16 90.5 126 44.4
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 3.4e-16 89.0 116 46.6
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 1.3e-15 87.0 136 42.6
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 1.4e-14 83.6 180 36.1
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 5.5e-14 81.6 120 45.8
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 2.3e-12 76.3 117 41.9
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 3.3e-11 72.4 113 45.1
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 3.3e-11 72.4 115 41.7
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 9.7e-11 70.9 104 41.3
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 2.2e-10 69.7 113 43.4
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 2.2e-10 69.7 113 43.4
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 8.2e-10 67.8 109 41.3
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 1.1e-09 67.4 114 39.5
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 2.4e-09 66.2 105 39.0
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 2.4e-09 66.2 101 44.6
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 4.1e-09 65.5 111 43.2
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 2.6e-08 62.8 131 35.9
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 8.5e-07 57.8 53 56.6
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 9.4e-06 54.3 108 38.9


User provided reference genes

Program Settings