Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 1.8e-90 335.9 167 100.0
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 4.2e-71 271.6 158 82.9
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 5.8e-65 251.1 158 72.8
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 2.9e-64 248.8 158 72.2
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.1e-63 246.9 158 71.5
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 1.1e-63 246.9 158 71.5
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 3.2e-63 245.4 159 73.0
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 7.1e-63 244.2 158 70.9
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 9.3e-63 243.8 158 70.3
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 1.2e-62 243.4 158 72.2
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 1.6e-62 243.0 156 73.1
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.6e-62 243.0 158 71.5
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.6e-62 243.0 158 71.5
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 1.6e-62 243.0 158 71.5
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 4.6e-62 241.5 158 70.3
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 6.0e-62 241.1 158 72.8
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 6.0e-62 241.1 156 70.5
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 7.9e-62 240.7 158 69.6
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.8e-61 239.6 158 69.0
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 3.0e-61 238.8 158 72.2
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.9e-61 238.4 158 70.3
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 5.1e-61 238.0 156 72.4
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 6.7e-61 237.7 158 69.6
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 8.7e-61 237.3 156 71.2
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 1.1e-60 236.9 158 69.6
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 1.1e-60 236.9 158 69.6
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.1e-60 236.9 158 69.6
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.9e-60 236.1 156 69.9
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 1.9e-60 236.1 160 68.8
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 3.3e-60 235.3 158 69.6
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 3.3e-60 235.3 156 71.8
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 4.3e-60 235.0 158 69.6
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.6e-60 234.6 158 69.0
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 5.6e-60 234.6 162 68.5
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 7.4e-60 234.2 158 69.0
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 1.3e-59 233.4 158 70.3
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 1.3e-59 233.4 158 69.6
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 1.3e-59 233.4 158 69.6
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.3e-59 233.4 158 69.6
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 1.3e-59 233.4 156 70.5
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 1.3e-59 233.4 156 70.5
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 1.6e-59 233.0 158 68.4
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 2.8e-59 232.3 158 68.4
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 3.7e-59 231.9 158 69.6
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 3.7e-59 231.9 158 67.7
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 4.8e-59 231.5 151 71.5
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 8.1e-59 230.7 156 70.5
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.4e-58 229.9 158 67.7
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 2.4e-58 229.2 155 69.0
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 3.1e-58 228.8 158 67.7
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 3.1e-58 228.8 158 67.1
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 5.3e-58 228.0 158 66.5
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 5.3e-58 228.0 156 66.7
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 6.9e-58 227.6 158 67.1
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.2e-57 226.9 158 67.7
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 1.5e-57 226.5 158 67.7
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 2.0e-57 226.1 156 67.9
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 2.0e-57 226.1 156 69.2
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 2.0e-57 226.1 156 69.2
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.6e-57 225.7 166 68.1
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 2.6e-57 225.7 150 69.3
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 2.6e-57 225.7 158 67.1
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 3.4e-57 225.3 153 73.2
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 3.4e-57 225.3 158 67.1
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 4.5e-57 224.9 154 68.8
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 7.6e-57 224.2 158 68.4
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 9.9e-57 223.8 158 66.5
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 9.9e-57 223.8 156 68.6
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 1.3e-56 223.4 158 66.5
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.3e-56 223.4 158 66.5
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 1.3e-56 223.4 158 66.5
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.3e-56 223.4 158 67.1
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.7e-56 223.0 158 65.8
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 2.2e-56 222.6 158 66.5
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 2.2e-56 222.6 188 59.6
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 2.2e-56 222.6 158 67.7
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 2.9e-56 222.2 158 65.8
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 8.4e-56 220.7 156 67.3
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 2.4e-55 219.2 158 65.8
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 2.4e-55 219.2 158 65.8
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 3.2e-55 218.8 158 66.5
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 1.2e-54 216.9 144 70.8
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.2e-54 216.9 158 66.5
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 6.0e-54 214.5 155 64.5
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.8e-53 213.0 160 62.5
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 1.1e-52 210.3 160 61.2
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 3.3e-52 208.8 158 62.7
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 2.8e-51 205.7 156 64.7
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 5.1e-45 184.9 133 64.7
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 2.8e-43 179.1 157 56.7
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 9.1e-34 147.5 145 50.3
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 9.1e-34 147.5 158 48.1
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 3.4e-33 145.6 145 49.7
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 5.0e-32 141.7 154 46.1
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 3.2e-31 139.0 152 52.0
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 9.7e-28 127.5 145 48.3
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 3.7e-27 125.6 147 48.3
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 1.3e-24 117.1 148 43.2
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 8.5e-16 87.8 69 60.9
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 7.2e-15 84.7 65 64.6
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 2.3e-13 79.7 59 61.0
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 2.6e-12 76.3 59 55.9


User provided reference genes

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