Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0248200 Oryza sativa ssp. japonica HOM05D004266 ORTHO05D005151 4.2e-84 314.7 165 100.0
Os06g0698400 Oryza sativa ssp. japonica HOM05D004266 ORTHO05D005151 1.2e-22 110.5 76 71.1
Aqoxy5G01970 Aquilegia oxysepala HOM05D004266 ORTHO05D005151 1.3e-11 73.9 63 60.3
AagrBONN_evm.TU.Sc2ySwM_228.143 Anthoceros agrestis HOM05D004266 ORTHO05D005151 2.1e-11 73.2 81 51.9
CARHR290980 Cardamine hirsuta HOM05D004266 ORTHO05D005151 6.2e-11 71.6 65 58.5
HanXRQChr02g0041241 Helianthus annuus HOM05D004266 ORTHO05D005151 6.2e-11 71.6 73 54.8
ECA247G0282 Erigeron canadensis HOM05D004266 ORTHO05D000002 8.1e-11 71.2 73 54.8
BcaB05g24678 Brassica carinata HOM05D004266 ORTHO05D005151 1.1e-10 70.9 74 52.7
BcaC03g15300 Brassica carinata HOM05D004266 ORTHO05D005151 1.1e-10 70.9 74 52.7
C02p29110 Brassica napus HOM05D004266 ORTHO05D005151 1.1e-10 70.9 74 52.7
BolC2t08959H Brassica oleracea HOM05D004266 ORTHO05D005151 1.1e-10 70.9 74 52.7
Cc09_g05020 Coffea canephora HOM05D004266 ORTHO05D005151 1.1e-10 70.9 63 57.1
CBR_g33965 Chara braunii HOM05D004266 ORTHO05D005151 1.4e-10 70.5 66 56.1
Lsat_1_v5_gn_1_5420 Lactuca sativa HOM05D004266 ORTHO05D005151 1.4e-10 70.5 60 60.0
Os11g0176100 Oryza sativa ssp. japonica HOM05D004266 ORTHO05D005151 1.4e-10 70.5 75 54.7
Zm00001eb201080 Zea mays HOM05D004266 ORTHO05D005151 1.4e-10 70.5 75 54.7
AL2G31370 Arabidopsis lyrata HOM05D004266 ORTHO05D005151 1.8e-10 70.1 65 56.9
AT1G71800 Arabidopsis thaliana HOM05D004266 ORTHO05D005151 1.8e-10 70.1 65 56.9
BcaB03g15618 Brassica carinata HOM05D004266 ORTHO05D005151 1.8e-10 70.1 65 56.9
BolC6t38642H Brassica oleracea HOM05D004266 ORTHO05D005151 1.8e-10 70.1 65 56.9
Carub.0002s1856 Capsella rubella HOM05D004266 ORTHO05D005151 1.8e-10 70.1 65 56.9
Sp5g26830 Schrenkiella parvula HOM05D004266 ORTHO05D005151 1.8e-10 70.1 65 56.9
SpUn0020_0140 Schrenkiella parvula HOM05D004266 ORTHO05D005151 1.8e-10 70.1 65 56.9
A02p17410 Brassica napus HOM05D004266 ORTHO05D005151 2.4e-10 69.7 65 56.9
BraA02t06786Z Brassica rapa HOM05D004266 ORTHO05D005151 2.4e-10 69.7 65 56.9
Thhalv10018490m.g Eutrema salsugineum HOM05D004266 ORTHO05D005151 2.4e-10 69.7 65 56.9
HPP92_019129 Vanilla planifolia HOM05D004266 ORTHO05D005151 2.4e-10 69.7 72 54.2
HPP92_019141 Vanilla planifolia HOM05D004266 ORTHO05D005151 2.4e-10 69.7 72 54.2
Mapoly0070s0034 Marchantia polymorpha HOM05D004266 ORTHO05D005151 3.1e-10 69.3 66 56.1
Pp3c14_13370 Physcomitrium patens HOM05D004266 ORTHO05D005151 3.1e-10 69.3 104 43.3
Medtr1g097280 Medicago truncatula HOM05D004266 ORTHO05D005151 4.0e-10 68.9 63 55.6
Zm00001eb091530 Zea mays HOM05D004266 ORTHO05D005151 4.0e-10 68.9 75 53.3
Aa31LG4G8830 Aethionema arabicum HOM05D004266 ORTHO05D005151 5.3e-10 68.6 63 57.1
MSTRG.2878 Avicennia marina HOM05D004266 ORTHO05D005151 5.3e-10 68.6 65 55.4
CsaV3_6G004790 Cucumis sativus L. HOM05D004266 ORTHO05D005151 5.3e-10 68.6 72 52.8
Lj7A387T76 Lonicera japonica HOM05D004266 ORTHO05D005151 5.3e-10 68.6 72 54.2
Lalb_Chr02g0141671 Lupinus albus HOM05D004266 ORTHO05D005151 5.3e-10 68.6 67 53.7
Manes.02G186700 Manihot esculenta HOM05D004266 ORTHO05D005151 5.3e-10 68.6 63 57.1
Solyc02g069160.3 Solanum lycopersicum HOM05D004266 ORTHO05D005151 5.3e-10 68.6 63 57.1
Sopen02g018290 Solanum pennellii HOM05D004266 ORTHO05D005151 5.3e-10 68.6 63 57.1
Ah.05g168420 Amaranthus hybridus HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
CSS0012598 Camellia sinensis var. sinensis HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
CSS0048022 Camellia sinensis var. sinensis HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
CDE07G0240 Ceratophyllum demersum HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 58.7
AUR62022307 Chenopodium quinoa HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
AUR62034933 Chenopodium quinoa HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
Migut.N01203 Erythranthe guttata HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
Hma1.2p1_0276F.1_g111070 Hydrangea macrophylla HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
Nitab4.5_0001207g0010 Nicotiana tabacum HOM05D004266 ORTHO05D005151 6.9e-10 68.2 73 53.4
Nitab4.5_0003229g0020 Nicotiana tabacum HOM05D004266 ORTHO05D005151 6.9e-10 68.2 73 53.4
PSO170G4898 Papaver somniferum HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
PSO210G1751 Papaver somniferum HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
Peaxi162Scf00089g01727 Petunia axillaris HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
Peaxi162Scf00415g00043 Petunia axillaris HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
Rhsim11G0089600 Rhododendron simsii HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
Hund17505 Selenicereus undatus HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
TAR625G1274 Trochodendron aralioides HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
GSVIVG01013670001 Vitis vinifera HOM05D004266 ORTHO05D005151 6.9e-10 68.2 63 57.1
arahy.Tifrunner.gnm1.ann1.BJW38K Arachis hypogaea HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
arahy.Tifrunner.gnm1.ann1.XP62BS Arachis hypogaea HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
CANSAT25G1166 Cannabis sativa HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
CiPaw.16G006400 Carya illinoinensis HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
Ca_10640_v3 Cicer arietinum L. HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
MELO3C019953.2 Cucumis melo HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
FvH4_2g12680 Fragaria vesca HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
FAN15G1722 Fragaria x ananassa HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
FAN20G1662 Fragaria x ananassa HOM05D000915 ORTHO05D005151 9.0e-10 67.8 63 55.6
FAN24G2899 Fragaria x ananassa HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
FAN27G0763 Fragaria x ananassa HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
Glyma.10G219500 Glycine max HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
Glyma.20G172200 Glycine max HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
Lj5g0009681 Lotus japonicus HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
MD05G1038100 Malus domestica HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
MD10G1041800 Malus domestica HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
Phvul.007G085700 Phaseolus vulgaris HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
Psat6g189240 Pisum sativum HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
Prupe.8G045900 Prunus persica HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
PGR042G2606 Punica granatum HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
QL02p035395 Quercus lobata HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
RcHm_v2.0_Chr6g0273401 Rosa chinensis HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
Sed0021776 Sechium edule HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
Sed0023525 Sechium edule HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
PGSC0003DMG400010340 Solanum tuberosum HOM05D004266 ORTHO05D005151 9.0e-10 67.8 83 48.2
SGA_v2.0_scaffold112G31597 Striga asiatica HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 57.1
SGA_v2.0_scaffold47G17607 Striga asiatica HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 57.1
TPR.G23156 Trifolium pratense HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
VMungo0720G1722 Vigna mungo HOM05D004266 ORTHO05D005151 9.0e-10 67.8 63 55.6
A07p30590 Brassica napus HOM05D004266 ORTHO05D005151 1.2e-09 67.4 65 55.4
BraA07t30694Z Brassica rapa HOM05D004266 ORTHO05D005151 1.2e-09 67.4 65 55.4
DCAR_003088 Daucus carota HOM05D004266 ORTHO05D005151 1.2e-09 67.4 63 57.1
Ciclev10000749m.g Citrus clementina HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
Duzib116G0903 Durio zibethinus HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
Gohir.A05G247600 Gossypium hirsutum HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
Gohir.D05G249100 Gossypium hirsutum HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
Gohir.D06G114601 Gossypium hirsutum HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
Gorai.009G260200 Gossypium raimondii HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
Gorai.010G131000 Gossypium raimondii HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
Lalb_Chr06g0161861 Lupinus albus HOM05D004266 ORTHO05D005151 1.5e-09 67.0 67 52.2
Potri.002G061200 Populus trichocarpa HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
Sc03g0006210 Simmondsia chinensis HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
Solyc09g065080.2 Solanum lycopersicum HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 57.1
Thecc.08G196800 Theobroma cacao HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
TWI34G1000 Tripterygium wilfordii HOM05D004266 ORTHO05D005151 1.5e-09 67.0 63 55.6
BcaC08g45756 Brassica carinata HOM05D004266 ORTHO05D005151 2.0e-09 66.6 138 38.4
C06p35370 Brassica napus HOM05D004266 ORTHO05D005151 2.0e-09 66.6 138 38.4
Dinv36591 Davidia involucrata HOM05D000943 ORTHO05D005151 2.0e-09 66.6 63 55.6
Duzib211G0120 Durio zibethinus HOM05D004266 ORTHO05D005151 2.0e-09 66.6 63 55.6
Sopen09g026800 Solanum pennellii HOM05D004266 ORTHO05D005151 2.6e-09 66.2 63 55.6
MSTRG.21597 Avicennia marina HOM05D004266 ORTHO05D005151 3.4e-09 65.9 63 55.6
THA.LOC104800099 Tarenaya hassleriana HOM05D004266 ORTHO05D005151 4.5e-09 65.5 63 54.0
THA.LOC104800222 Tarenaya hassleriana HOM05D004266 ORTHO05D005151 4.5e-09 65.5 63 54.0
TWI60G1440 Tripterygium wilfordii HOM05D004266 ORTHO05D005151 4.5e-09 65.5 63 54.0
CSS0023855 Camellia sinensis var. sinensis HOM05D004266 ORTHO05D005151 5.8e-09 65.1 78 47.4
TAR628G0751 Trochodendron aralioides HOM05D004266 ORTHO05D005151 5.8e-09 65.1 63 54.0
Cpa.g.sc26.136 Carica papaya HOM05D004266 ORTHO05D005151 7.6e-09 64.7 61 54.1
FAN09G4196 Fragaria x ananassa HOM05D004266 ORTHO05D005151 1.0e-08 64.3 61 50.8
MBI17_g21480_MAGBIO Magnolia biondii HOM05D004266 ORTHO05D005151 1.0e-08 64.3 60 56.7
EL10Ac1g01744 Beta vulgaris HOM05D004266 ORTHO05D005151 1.3e-08 63.9 59 57.6
CiPaw.15G010800 Carya illinoinensis HOM05D004266 ORTHO05D005151 1.3e-08 63.9 63 54.0
CDE04G2415 Ceratophyllum demersum HOM05D004266 ORTHO05D005151 1.3e-08 63.9 59 59.3
FAN09G3681 Fragaria x ananassa HOM05D004266 ORTHO05D005151 1.3e-08 63.9 61 50.8
RcHm_v2.0_Chr3g0481441 Rosa chinensis HOM05D004266 ORTHO05D005151 1.3e-08 63.9 64 50.0
Cfa018249 Carpinus fangiana HOM05D004266 ORTHO05D005151 1.7e-08 63.5 61 55.7
Haze_17848 Corylus avellana HOM05D004266 ORTHO05D005151 2.2e-08 63.2 61 54.1
PSO339G2267 Papaver somniferum HOM05D004266 ORTHO05D005151 2.9e-08 62.8 72 48.6
PSO339G5784 Papaver somniferum HOM05D004266 ORTHO05D005151 2.9e-08 62.8 72 48.6
Sabra02G0049600 Salix brachista HOM05D004266 ORTHO05D005151 2.9e-08 62.8 59 55.9
MCO06G063 Micromonas commoda HOM05D004266 ORTHO05D005151 3.8e-08 62.4 65 50.8
SMO147G0245 Selaginella moellendorffii HOM05D004266 ORTHO05D005151 3.8e-08 62.4 61 55.7
ClCG08G008770 Citrullus lanatus HOM05D004266 ORTHO05D005151 4.9e-08 62.0 63 52.4
FvH4_6g22940 Fragaria vesca HOM05D004266 ORTHO05D005151 4.9e-08 62.0 61 49.2
TAR381G0928 Trochodendron aralioides HOM05D000446 ORTHO05D005151 4.9e-08 62.0 59 55.9
unitig_748.g8757 Utricularia gibba HOM05D004266 ORTHO05D005151 6.5e-08 61.6 68 48.5
ATR0661G572 Amborella trichopoda HOM05D004266 ORTHO05D005151 8.4e-08 61.2 59 55.9
Cre01.g024200 Chlamydomonas reinhardtii HOM05D004266 ORTHO05D005151 1.1e-07 60.8 86 39.5
FAN02G0328 Fragaria x ananassa HOM05D004266 ORTHO05D005151 1.9e-07 60.1 132 34.8
FAN05G2365 Fragaria x ananassa HOM05D004266 ORTHO05D005151 1.9e-07 60.1 132 34.8
SalBow4G1869 Salvia bowleyana HOM05D004266 ORTHO05D005151 3.2e-07 59.3 89 43.8
FAN14G5515 Fragaria x ananassa HOM05D004266 ORTHO05D005151 4.2e-07 58.9 132 34.1
SalBow8G2839 Salvia bowleyana HOM05D004266 ORTHO05D005151 4.2e-07 58.9 90 43.3
PRCOL_00002013 Prasinoderma coloniale HOM05D004266 ORTHO05D005151 7.1e-07 58.2 66 45.5
FvH4_6g23390 Fragaria vesca HOM05D004266 ORTHO05D005151 9.3e-07 57.8 132 34.1
Pp3c11_26720 Physcomitrium patens HOM05D002097 ORTHO05D002248 1.2e-06 57.4 89 36.0
Pp3c7_5120 Physcomitrium patens HOM05D002097 ORTHO05D002248 1.2e-06 57.4 89 36.0
Pp3c7_5140 Physcomitrium patens HOM05D002097 ORTHO05D002248 1.2e-06 57.4 89 36.0
Mapoly0067s0005 Marchantia polymorpha HOM05D002097 ORTHO05D002248 2.1e-06 56.6 70 44.3
CAN.G341.13 Capsicum annuum HOM05D002097 ORTHO05D002248 7.9e-06 54.7 100 34.0


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