Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052476.1 Olea europaea HOM05D000924 ORTHO05D030917 2.7e-56 221.9 118 100.0
MSTRG.4451 Avicennia marina HOM05D000924 ORTHO05D001209 1.2e-37 159.8 116 73.3
SalBow7G1805 Salvia bowleyana HOM05D000924 ORTHO05D001209 3.4e-35 151.8 115 67.8
Sopen06g026770 Solanum pennellii HOM05D000924 ORTHO05D001209 2.2e-34 149.1 115 69.6
Cc00_g02560 Coffea canephora HOM05D000924 ORTHO05D001209 6.4e-34 147.5 116 71.6
Migut.D01699 Erythranthe guttata HOM05D000924 ORTHO05D001209 1.4e-33 146.4 118 67.8
Solyc06g069480.3 Solanum lycopersicum HOM05D000924 ORTHO05D001209 1.4e-33 146.4 115 68.7
Dinv17404 Davidia involucrata HOM05D000924 ORTHO05D001209 2.4e-33 145.6 115 69.6
Lj5C103G8 Lonicera japonica HOM05D000924 ORTHO05D001209 5.4e-33 144.4 115 69.6
vmacro17603 Vaccinium macrocarpon HOM05D000924 ORTHO05D001209 7.1e-33 144.1 115 67.8
DCAR_011555 Daucus carota HOM05D000924 ORTHO05D001209 1.6e-32 142.9 106 71.7
AUR62021574 Chenopodium quinoa HOM05D000924 ORTHO05D001209 4.6e-32 141.4 115 66.1
Nitab4.5_0001328g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 4.6e-32 141.4 115 67.0
Prupe.4G035000 Prunus persica HOM05D000924 ORTHO05D001209 4.6e-32 141.4 103 72.8
TPR.G12162 Trifolium pratense HOM05D000924 ORTHO05D001209 4.6e-32 141.4 115 63.5
CAN.G587.45 Capsicum annuum HOM05D000924 ORTHO05D001209 1.0e-31 140.2 115 67.0
Hma1.2p1_0060F.1_g033190 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 1.0e-31 140.2 115 69.6
Hund09903 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.0e-31 140.2 105 69.5
Hund09904 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.0e-31 140.2 105 69.5
Lsat_1_v5_gn_5_22540 Lactuca sativa HOM05D000924 ORTHO05D001209 2.3e-31 139.0 116 65.5
EL10Ac5g11118 Beta vulgaris HOM05D000924 ORTHO05D001209 3.0e-31 138.7 115 64.3
Sc03g0008290 Simmondsia chinensis HOM05D000924 ORTHO05D001209 5.1e-31 137.9 115 64.3
SGA_v2.0_scaffold7G04039 Striga asiatica HOM05D000924 ORTHO05D001209 5.1e-31 137.9 103 68.0
Rhsim08G0146700 Rhododendron simsii HOM05D000924 ORTHO05D001209 6.6e-31 137.5 115 65.2
CSS0010952 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 3.3e-30 135.2 115 63.5
CSS0043185 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 3.3e-30 135.2 115 63.5
QL10p019292 Quercus lobata HOM05D000924 ORTHO05D001209 3.3e-30 135.2 117 63.2
Manes.06G085400 Manihot esculenta HOM05D000924 ORTHO05D001209 5.6e-30 134.4 116 62.1
Medtr3g025300 Medicago truncatula HOM05D000924 ORTHO05D001209 5.6e-30 134.4 115 61.7
TAR622G0150 Trochodendron aralioides HOM05D000924 ORTHO05D001209 7.3e-30 134.0 115 62.6
Ah.11g047880 Amaranthus hybridus HOM05D000924 ORTHO05D001209 9.6e-30 133.7 115 63.5
MD06G1201900 Malus domestica HOM05D000924 ORTHO05D001209 1.6e-29 132.9 103 68.9
GSVIVG01007875001 Vitis vinifera HOM05D000924 ORTHO05D001209 1.6e-29 132.9 115 66.1
FvH4_5g13990 Fragaria vesca HOM05D000924 ORTHO05D001209 2.1e-29 132.5 103 68.9
FAN18G1430 Fragaria x ananassa HOM05D000924 ORTHO05D001209 2.1e-29 132.5 103 68.9
Glyma.06G202500 Glycine max HOM05D000924 ORTHO05D001209 2.8e-29 132.1 115 60.0
RcHm_v2.0_Chr7g0182981 Rosa chinensis HOM05D000924 ORTHO05D001209 3.6e-29 131.7 103 68.9
CANSAT80G0652 Cannabis sativa HOM05D000924 ORTHO05D001209 4.7e-29 131.3 103 68.9
Duzib205G0140 Durio zibethinus HOM05D000924 ORTHO05D001209 4.7e-29 131.3 116 65.5
THA.LOC104818343 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 4.7e-29 131.3 116 60.3
Ciclev10020262m.g Citrus clementina HOM05D000924 ORTHO05D001209 6.2e-29 131.0 116 60.3
Thhalv10003505m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 6.2e-29 131.0 116 61.2
FAN08G2399 Fragaria x ananassa HOM05D000924 ORTHO05D001209 6.2e-29 131.0 103 68.0
Eucgr.B00583 Eucalyptus grandis HOM05D000924 ORTHO05D001209 1.1e-28 130.2 120 62.5
Thecc.03G100600 Theobroma cacao HOM05D000924 ORTHO05D001209 1.1e-28 130.2 115 61.7
Gohir.A12G182100 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.4e-28 129.8 115 60.9
Potri.015G056501 Populus trichocarpa HOM05D000924 ORTHO05D001209 2.4e-28 129.0 112 59.8
Lj1g0003461 Lotus japonicus HOM05D000924 ORTHO05D001209 3.1e-28 128.6 116 60.3
AUR62008516 Chenopodium quinoa HOM05D000924 ORTHO05D001209 5.2e-28 127.9 95 70.5
Cfa019322 Carpinus fangiana HOM05D000924 ORTHO05D001209 6.9e-28 127.5 116 62.9
HanXRQChr05g0157291 Helianthus annuus HOM05D000924 ORTHO05D001209 8.9e-28 127.1 116 60.3
CARHR274830 Cardamine hirsuta HOM05D000924 ORTHO05D001209 2.0e-27 125.9 117 61.5
VMungo1309G1347 Vigna mungo HOM05D000924 ORTHO05D001209 2.0e-27 125.9 116 58.6
COL.COLO4_06749 Corchorus olitorius HOM05D000924 ORTHO05D001209 2.6e-27 125.6 116 62.1
PSO017G0961 Papaver somniferum HOM05D000924 ORTHO05D001209 2.6e-27 125.6 116 56.9
A02p41450 Brassica napus HOM05D000924 ORTHO05D001209 3.4e-27 125.2 118 60.2
BraA02t09087Z Brassica rapa HOM05D000924 ORTHO05D001209 3.4e-27 125.2 118 60.2
PSO478G0555 Papaver somniferum HOM05D000924 ORTHO05D001209 3.4e-27 125.2 116 57.8
Sp2g24390 Schrenkiella parvula HOM05D000924 ORTHO05D001209 3.4e-27 125.2 116 58.6
Carub.0008s2181 Capsella rubella HOM05D000924 ORTHO05D001209 4.4e-27 124.8 117 59.8
Gorai.008G198400 Gossypium raimondii HOM05D000924 ORTHO05D001209 5.8e-27 124.4 116 62.9
AL8G37790 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 7.6e-27 124.0 117 60.7
C02p61380 Brassica napus HOM05D000924 ORTHO05D001209 9.9e-27 123.6 117 59.8
BolC2t12187H Brassica oleracea HOM05D000924 ORTHO05D001209 9.9e-27 123.6 117 59.8
Haze_07712 Corylus avellana HOM05D000924 ORTHO05D001209 1.3e-26 123.2 118 61.0
Phvul.009G192100 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 1.7e-26 122.9 115 58.3
arahy.Tifrunner.gnm1.ann1.TAYI6X Arachis hypogaea HOM05D000924 ORTHO05D001209 2.9e-26 122.1 115 58.3
AT5G61140 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 3.8e-26 121.7 118 60.2
Lalb_Chr14g0362841 Lupinus albus HOM05D000924 ORTHO05D001209 3.8e-26 121.7 116 58.6
TWI60G0107 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 3.8e-26 121.7 111 62.2
Nn4g23416 Nelumbo nucifera HOM05D000924 ORTHO05D001209 6.4e-26 120.9 115 60.0
Aa31LG11G2210 Aethionema arabicum HOM05D000924 ORTHO05D001209 1.1e-25 120.2 116 59.5
PGR083G0994 Punica granatum HOM05D000924 ORTHO05D001209 1.9e-25 119.4 116 60.3
Sed0023477 Sechium edule HOM05D000924 ORTHO05D001209 1.9e-25 119.4 104 61.5
arahy.Tifrunner.gnm1.ann1.QJ15ZQ Arachis hypogaea HOM05D000924 ORTHO05D001209 2.4e-25 119.0 116 57.8
Actinidia25776 Actinidia chinensis HOM05D000924 ORTHO05D001209 3.2e-25 118.6 115 58.3
Aqoxy3G03623 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 3.2e-25 118.6 120 52.5
Cpa.g.sc94.44 Carica papaya HOM05D000924 ORTHO05D001209 4.2e-25 118.2 116 57.8
Atru.chr9.419 Acer truncatum HOM05D000924 ORTHO05D001209 2.1e-24 115.9 117 58.1
MBI16_g05786_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 4.6e-24 114.8 102 59.8
Aqoxy4G02207 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 3.9e-23 111.7 115 53.0
CsaV3_1G005930 Cucumis sativus L. HOM05D000924 ORTHO05D001209 8.7e-23 110.5 104 59.6
Zm00001eb400270 Zea mays HOM05D000924 ORTHO05D001209 2.8e-21 105.5 115 55.7
Gohir.D12G185001 Gossypium hirsutum HOM05D000924 ORTHO05D001209 3.6e-21 105.1 102 55.9
Aqoxy523s001 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 1.4e-20 103.2 120 48.3
ClCG04G011840 Citrullus lanatus HOM05D000924 ORTHO05D001209 1.5e-19 99.8 139 45.3
HPP92_009485 Vanilla planifolia HOM05D000924 ORTHO05D001209 2.0e-19 99.4 115 53.0
Ca_26749_v3 Cicer arietinum L. HOM05D000924 ORTHO05D001209 1.4e-17 93.2 80 60.0
CDE06G1554 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 3.2e-17 92.0 117 45.3
Oeu031662.3 Olea europaea HOM05D000924 ORTHO05D001209 9.6e-14 80.5 40 100.0
Actinidia27219 Actinidia chinensis HOM05D000924 ORTHO05D030917 6.4e-10 67.8 101 43.6
Pp3c2_9850 Physcomitrium patens HOM05D000924 ORTHO05D001209 4.2e-09 65.1 78 44.9
AagrBONN_evm.TU.Sc2ySwM_228.4663 Anthoceros agrestis HOM05D000924 ORTHO05D001209 5.5e-09 64.7 103 37.9
CBR_g38192 Chara braunii HOM05D000924 ORTHO05D001209 6.0e-08 61.2 81 38.3
Migut.G01248 Erythranthe guttata HOM05D000924 ORTHO05D030917 1.9e-06 56.2 33 84.8


User provided reference genes

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