Gene: CDE06G1554

General Information

Structural Information

Species Ceratophyllum demersum
Gene Identifier CDE06G1554
Transcript Identifier CDE06G1554.1
Gene Type Coding gene
Location 4 : 72318150-72416262 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000924
#Genes/#Species 651/100
Phylogenetic origin

ID ORTHO05D001209
#Genes/#Species 456/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

name gene_prefix13726

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010228	ISO	PLAZA Integrative Orthology	vegetative to reproductive phase transition of meristem	AT1G20960
GO:0006397	ISO	PLAZA Integrative Orthology	mRNA processing	AT1G20960

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	InterPro	ATP binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G20960
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT5G61140

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT2G42270
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G20960
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT1G20960

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR001650	Helicase, C-terminal
IPR011545	DEAD/DEAH box helicase domain
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR014001	Helicase superfamily 1/2, ATP-binding domain

Mapman id	Description
16.2.7.1.4	RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Brr2)