Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 4.5e-242 840.9 439 100.0
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 7.4e-152 541.2 457 68.3
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 9.4e-147 524.2 319 86.8
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 2.7e-146 522.7 442 66.1
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.4e-145 520.4 440 65.5
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.5e-144 516.9 457 65.6
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 2.4e-142 509.6 458 64.6
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 9.4e-139 497.7 443 65.0
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 1.0e-137 494.2 448 63.6
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 2.0e-136 490.0 455 62.2
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 3.3e-136 489.2 457 63.0
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 4.4e-136 488.8 452 61.9
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 1.3e-135 487.3 453 62.3
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.7e-135 486.9 455 62.2
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.1e-134 484.2 453 62.0
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.2e-133 480.7 456 61.6
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 7.7e-133 478.0 449 63.0
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 1.0e-132 477.6 539 55.5
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 1.3e-132 477.2 450 61.3
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 6.5e-132 474.9 440 61.4
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 8.5e-132 474.6 455 60.9
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 2.5e-131 473.0 455 60.7
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 7.2e-131 471.5 455 60.2
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 7.2e-131 471.5 454 60.8
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 1.2e-130 470.7 456 61.2
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 4.7e-130 468.8 456 61.2
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 4.7e-130 468.8 455 60.0
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 4.7e-130 468.8 422 63.7
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 8.0e-130 468.0 559 53.5
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 1.0e-129 467.6 457 60.8
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.3e-129 466.5 456 60.7
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 2.0e-128 463.4 449 61.9
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 3.7e-127 459.1 457 60.4
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 3.7e-127 459.1 468 59.8
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 3.1e-126 456.1 455 59.6
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 4.1e-126 455.7 446 60.3
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 5.3e-126 455.3 455 59.6
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 7.0e-126 454.9 451 59.2
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 9.1e-126 454.5 522 56.1
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.3e-124 450.7 447 60.2
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 1.7e-124 450.3 454 58.8
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 2.9e-124 449.5 458 58.1
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 3.8e-124 449.1 446 59.9
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 7.2e-123 444.9 454 57.7
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 2.1e-122 443.4 453 58.5
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 6.1e-122 441.8 457 57.5
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 8.0e-122 441.4 450 59.6
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 1.4e-121 440.7 455 59.6
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 6.8e-121 438.3 454 60.1
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 6.8e-121 438.3 444 60.6
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 8.8e-121 438.0 459 58.0
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 2.0e-120 436.8 474 56.1
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 7.5e-120 434.9 522 53.3
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 9.7e-120 434.5 443 57.1
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 5.3e-118 428.7 442 58.8
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 3.5e-117 426.0 452 57.7
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.0e-116 424.5 438 58.0
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 1.7e-116 423.7 444 56.3
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 2.2e-116 423.3 445 57.5
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 2.2e-116 423.3 378 64.0
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 2.9e-116 422.9 439 57.9
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 1.5e-115 420.6 466 54.7
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 6.1e-114 415.2 454 55.1
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 3.0e-113 412.9 442 55.9
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.2e-112 411.0 455 56.0
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 2.6e-112 409.8 453 54.7
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 1.3e-111 407.5 426 57.7
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 7.0e-110 401.7 451 55.2
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 4.5e-109 399.1 426 56.6
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 5.9e-109 398.7 443 55.8
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.0e-108 397.9 450 56.4
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.7e-108 397.1 442 56.6
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 2.3e-108 396.7 446 54.9
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 2.9e-108 396.4 330 66.4
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 6.6e-108 395.2 449 54.6
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 1.9e-107 393.7 447 54.8
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 2.3e-105 386.7 333 66.7
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 3.0e-105 386.3 401 58.4
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 2.0e-104 383.6 322 67.4
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 4.4e-104 382.5 414 55.8
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 1.4e-102 377.5 323 66.6
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 1.8e-102 377.1 414 56.3
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 5.4e-102 375.6 393 56.5
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 9.2e-102 374.8 334 66.2
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 2.9e-100 369.8 325 64.9
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 4.0e-97 359.4 329 64.4
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 7.5e-96 355.1 475 52.4
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 9.8e-96 354.8 325 62.8
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 2.2e-95 353.6 401 52.6
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.9e-94 350.5 409 52.1
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 7.0e-94 348.6 441 49.9
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 7.8e-93 345.1 466 47.0
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 8.6e-92 341.7 422 49.3
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 4.3e-91 339.3 333 59.8
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 5.6e-91 339.0 336 61.9
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 7.3e-91 338.6 328 60.7
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 8.9e-89 331.6 330 59.4
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 7.5e-88 328.6 286 64.3
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 1.7e-84 317.4 331 57.7
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.5e-80 304.3 328 56.1
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 3.5e-77 293.1 330 55.8
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 1.1e-75 288.1 295 56.9
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 9.6e-75 285.0 420 43.3
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.2e-74 284.6 412 45.9
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 3.1e-73 280.0 406 43.1
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.2e-70 270.0 331 52.9
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 1.3e-68 264.6 282 52.1
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 4.4e-64 249.6 223 61.9
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 5.4e-62 242.7 322 50.3
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 9.3e-62 241.9 445 38.0
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 6.0e-61 239.2 302 54.0
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 1.2e-56 224.9 234 58.5
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 3.9e-44 183.3 218 50.9
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 4.1e-41 173.3 306 39.5
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 3.9e-36 156.8 87 88.5
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.3e-34 151.8 83 90.4
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 2.2e-34 151.0 266 35.0
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 5.3e-33 146.4 83 88.0
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 6.9e-33 146.0 89 82.0
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 1.2e-32 145.2 83 85.5
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 1.2e-32 145.2 83 85.5
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 2.9e-31 140.6 114 64.0
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 3.8e-31 140.2 84 82.1
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 6.5e-31 139.4 85 80.0
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 5.5e-30 136.3 81 84.0
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 1.2e-29 135.2 85 78.8
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 1.6e-29 134.8 326 36.2
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 2.1e-29 134.4 76 85.5
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 1.0e-28 132.1 85 77.6
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 6.3e-26 122.9 81 72.8
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.7e-18 98.2 152 44.7
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 5.0e-15 86.7 56 73.2
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 5.5e-14 83.2 88 59.1
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.7e-10 71.6 42 78.6
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 4.8e-10 70.1 70 50.0
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 8.2e-10 69.3 96 45.8
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 2.9e-07 60.8 30 93.3


User provided reference genes

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