Gene: AT3G06820

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G06820
  • Transcript Identifier AT3G06820.2
  • Gene Type Coding gene
  • Location Chr3 : 2151027-2153264 : negative

Gene Family Information

  • ID HOM05D005526
  • #Genes/#Species 139/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G06820.2
  • symbol BRCC36B
  • Alias AtBRCC36B
  • full_name BRCA1/BRCA2-containing complex 36 homolog B
  • uniprot F4JC55

Descriptions

  • Description Mov34/MPN/PAD-1 family protein
  • Computational description Mov34/MPN/PAD-1 family protein; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT1G80210.1); Has 413 Blast hits to 335 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 75; Plants - 96; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
  • Computational description Mov34/MPN/PAD-1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT1G80210.1); Has 1006 Blast hits to 928 proteins in 230 species: Archae - 0; Bacteria - 7; Metazoa - 464; Fungi - 225; Plants - 185; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070536
IEA
GOA Databaseprotein K63-linked deubiquitination
GO:0070536
IEA
InterProprotein K63-linked deubiquitination
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IMP
Gene OntologyDNA repair1
GO:0006281
IEA
InterProDNA repair
GO:0006302
IBA
Gene Ontologydouble-strand break repair2
GO:0070537
IBA
Gene Ontologyhistone H2A K63-linked deubiquitination2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IBA
Gene Ontologythiol-dependent deubiquitinase2
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0070122
IEA
Gene Ontologyisopeptidase activity
GO:0070122
IEA
InterProisopeptidase activity
GO:0008237
IBA
IEA
Gene Ontologymetallopeptidase activity2
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0005515
IEA
InterProprotein binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0031593
IBA
Gene Ontologypolyubiquitin modification-dependent protein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070552
IEA
GOA DatabaseBRISC complex
GO:0070552
IBA
Gene OntologyBRISC complex2
GO:0070552
IEA
InterProBRISC complex
GO:0070531
IEA
GOA DatabaseBRCA1-A complex
GO:0070531
IBA
Gene OntologyBRCA1-A complex2
GO:0070531
IEA
InterProBRCA1-A complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040749 BRCC36, C-terminal helical domain
IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
IPR033860 Brcc36 isopeptidase
Mapman id Description
14.3.2.2 DNA damage response.homologous recombination repair (HR).BRCC DNA-damage response complex.component BRCC36