Gene: Sed0012845

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0012845
  • Transcript Identifier Sed0012845.1
  • Gene Type Coding gene
  • Location LG05 : 28330005-28333357 : negative

Gene Family Information

  • ID HOM05D005526
  • #Genes/#Species 139/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0012845.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT3G06820
GO:0006310
ISO
PLAZA Integrative OrthologyDNA recombination AT1G80210
GO:0070536
ISO
PLAZA Homology (enrichment)protein K63-linked deubiquitination HOM05D005526

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
ISO
PLAZA Homology (enrichment)thiol-dependent deubiquitinase HOM05D005526
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D005526
GO:0070122
ISO
PLAZA Homology (enrichment)isopeptidase activity HOM05D005526
GO:0008237
ISO
PLAZA Homology (enrichment)metallopeptidase activity HOM05D005526

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G80210
GO:0070552
ISO
PLAZA Homology (enrichment)BRISC complex HOM05D005526
GO:0070531
ISO
PLAZA Homology (enrichment)BRCA1-A complex HOM05D005526

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
14.3.2.2 DNA damage response.homologous recombination repair (HR).BRCC DNA-damage response complex.component BRCC36