Gene: Pp3c25_2940

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c25_2940
  • Transcript Identifier Pp3c25_2940V3.2
  • Gene Type Coding gene
  • Location Chr25 : 1973031-1974693 : negative

Gene Family Information

  • ID HOM05D005526
  • #Genes/#Species 139/96
  • Phylogenetic origin
  • ID ORTHO05D311957
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c25_2940V3.2
  • pacid 32980500
  • alias Pp1s326_58V6
  • uniprot A0A2K1IDM5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070537
IBA
GOA Databasehistone H2A K63-linked deubiquitination
GO:0006302
IBA
GOA Databasedouble-strand break repair
GO:0006281
ISO
PLAZA Homology (enrichment)DNA repair HOM05D005526
GO:0070536
ISO
PLAZA Homology (enrichment)protein K63-linked deubiquitination HOM05D005526

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IBA
GOA Databasethiol-dependent deubiquitinase
GO:0008237
IBA
GOA Databasemetallopeptidase activity
GO:0031593
IBA
GOA Databasepolyubiquitin modification-dependent protein binding
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D005526
GO:0070122
ISO
PLAZA Homology (enrichment)isopeptidase activity HOM05D005526

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070552
IBA
GOA DatabaseBRISC complex
GO:0070531
IBA
GOA DatabaseBRCA1-A complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040749 BRCC36, C-terminal helical domain
Mapman id Description
14.3.2.2 DNA damage response.homologous recombination repair (HR).BRCC DNA-damage response complex.component BRCC36