Gene: PGSC0003DMG401028513

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG401028513
Transcript Identifier PGSC0003DMT400073372
Gene Type Coding gene
Location ST4.03ch06 : 49722334-49729918 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005526
#Genes/#Species 139/96
Phylogenetic origin

ID ORTHO05D006802
#Genes/#Species 138/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

pacid 37451584
id PGSC0003DMG401028513.v4.03
uniprot M1CRX6

Descriptions

Short descriptions
Ortholog descriptions

Description C6.1a

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0070537	IBA	GOA Database	histone H2A K63-linked deubiquitination
GO:0006302	IBA	GOA Database	double-strand break repair
GO:0006281	ISO	PLAZA Integrative Orthology	DNA repair	AT3G06820
GO:0006310	ISO	PLAZA Integrative Orthology	DNA recombination	AT1G80210
GO:0070536	ISO	PLAZA Homology (enrichment)	protein K63-linked deubiquitination	HOM05D005526

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008237	IBA IEA	GOA Database	metallopeptidase activity
GO:0008237	IEA	InterPro	metallopeptidase activity
GO:0070122	IEA	GOA Database	isopeptidase activity
GO:0070122	IEA	InterPro	isopeptidase activity
GO:0004843	IBA	GOA Database	thiol-dependent deubiquitinase
GO:0031593	IBA	GOA Database	polyubiquitin modification-dependent protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0070552	IBA	GOA Database	BRISC complex
GO:0070531	IBA	GOA Database	BRCA1-A complex
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G80210

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain

Mapman id	Description
35.1	not assigned.annotated