Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 0.0e+00 1871.7 940 100.0
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 2.8e-257 892.5 972 55.6
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 1.1e-256 890.6 1049 52.6
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 1.1e-250 870.5 1033 52.4
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 2.8e-249 865.9 1092 49.6
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 1.5e-247 860.1 1084 50.7
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 1.4e-245 853.6 1071 50.2
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 1.8e-243 846.7 1041 50.3
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 5.7e-242 841.6 1098 49.5
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 1.6e-241 840.1 1104 48.0
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 2.2e-241 839.7 1106 48.1
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 1.4e-240 837.0 1040 50.1
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 1.6e-236 823.5 1034 49.9
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 2.7e-236 822.8 1024 50.5
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 1.3e-233 813.9 863 56.9
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 1.7e-233 813.5 1023 50.0
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 5.3e-232 808.5 967 52.0
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 1.2e-231 807.4 1023 49.8
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 3.4e-231 805.8 1069 47.9
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 1.7e-230 803.5 1042 49.0
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 3.2e-229 799.3 1033 49.2
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 1.6e-228 797.0 1031 48.4
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 6.1e-228 795.0 1036 48.3
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 2.3e-227 793.1 1028 48.8
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 5.2e-227 792.0 1039 47.9
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 8.8e-227 791.2 1061 48.1
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 8.2e-225 784.6 1030 48.3
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 3.1e-224 782.7 1069 47.5
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 5.3e-224 781.9 1036 48.6
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 7.0e-224 781.6 1026 48.4
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 5.0e-222 775.4 1060 47.8
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 8.5e-222 774.6 1042 47.6
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 3.2e-221 772.7 1133 45.2
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 5.5e-221 771.9 1041 47.7
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 7.2e-221 771.5 1058 46.6
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 7.2e-221 771.5 1057 47.1
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 9.4e-221 771.2 1058 46.6
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 1.0e-219 767.7 1024 47.9
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 3.0e-219 766.1 1045 47.5
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 5.2e-219 765.4 1024 47.8
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 5.2e-219 765.4 802 55.9
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 5.2e-219 765.4 1058 46.0
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.0e-218 763.5 1056 46.6
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 2.0e-218 763.5 1038 46.8
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.6e-218 763.1 1058 45.7
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 2.6e-218 763.1 1023 47.6
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 2.6e-218 763.1 1020 47.7
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 4.4e-218 762.3 1047 47.4
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 4.4e-218 762.3 1138 45.2
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 4.1e-216 755.7 1056 45.9
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 5.3e-216 755.4 1028 46.7
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 7.7e-215 751.5 1023 47.7
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 1.9e-213 746.9 1041 46.4
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 3.2e-213 746.1 1071 45.8
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 2.7e-212 743.0 1032 47.3
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 4.0e-211 739.2 1020 46.8
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 8.8e-211 738.0 1027 46.6
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 2.6e-210 736.5 1009 46.7
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 2.4e-208 729.9 1032 45.6
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 2.4e-208 729.9 1033 45.8
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 5.4e-208 728.8 1025 46.4
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 5.4e-208 728.8 1027 46.3
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 7.0e-208 728.4 1030 46.2
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 9.1e-208 728.0 1038 46.0
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 3.5e-207 726.1 1033 46.0
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 5.9e-207 725.3 1033 45.6
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.0e-206 724.5 834 52.0
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 2.9e-206 723.0 1080 44.3
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 1.1e-205 721.1 943 49.2
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 1.9e-205 720.3 953 48.7
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 2.5e-205 719.9 887 50.1
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 5.5e-205 718.8 1084 44.3
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 9.5e-205 718.0 1030 45.8
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 3.6e-204 716.1 1022 45.7
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 5.2e-203 712.2 1102 43.6
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 2.0e-202 710.3 1074 44.4
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 1.4e-200 704.1 995 45.4
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 2.4e-200 703.4 989 44.9
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 4.1e-200 702.6 832 51.3
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 3.3e-197 693.0 906 48.3
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 1.8e-195 687.2 1051 44.1
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 1.2e-194 684.5 996 44.7
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.5e-194 684.1 1028 44.9
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 2.0e-194 683.7 1021 45.0
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.6e-191 674.1 816 50.6
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 7.3e-189 665.2 781 53.1
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 2.8e-188 663.3 1045 42.4
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 9.2e-184 648.3 1027 42.1
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 1.6e-183 647.5 1082 40.6
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 3.6e-180 636.3 801 47.9
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 6.8e-179 632.1 683 54.6
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.4e-171 607.8 874 45.8
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 4.0e-171 606.3 867 45.4
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 3.5e-143 513.5 861 41.1
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 1.4e-139 501.5 1135 35.1
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 3.4e-138 496.9 834 42.7
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 2.3e-134 484.2 849 41.2
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 1.8e-131 474.6 831 41.3
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 7.6e-130 469.2 607 48.8
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 5.5e-128 463.0 863 39.0
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 5.5e-128 463.0 1097 34.7
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 3.8e-121 440.3 806 37.7
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 1.0e-118 432.2 607 47.4
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 4.1e-115 420.2 834 37.5
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 5.9e-114 416.4 718 41.8
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 3.2e-112 410.6 703 39.8
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 1.0e-110 405.6 832 34.6
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 6.3e-100 369.8 643 39.0
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 1.8e-99 368.2 419 53.5
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 6.8e-62 243.4 485 37.7
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 9.0e-38 163.3 345 34.8
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 4.5e-29 134.4 325 35.4
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 6.2e-23 114.0 151 39.1
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 2.4e-22 112.1 113 50.4
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 4.0e-22 111.3 442 25.1
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 6.5e-20 104.0 74 68.9
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 2.7e-18 98.6 88 60.2
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 5.1e-17 94.4 124 45.2
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 3.7e-15 88.2 286 29.7
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-13 80.5 72 63.9
CSS0035540 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 1.1e-11 76.6 80 47.5
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-09 68.9 256 29.7
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 3.9e-09 68.2 41 82.9
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 2.0e-08 65.9 37 89.2
Hma1.2p1_0053F.1_g030840 Hydrangea macrophylla HOM05D001486 ORTHO05D017058 1.8e-06 59.3 45 66.7


User provided reference genes

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