Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048684.2 Olea europaea HOM05D005263 ORTHO05D006891 1.8e-196 689.1 358 100.0
Migut.F00003 Erythranthe guttata HOM05D005263 ORTHO05D006891 3.4e-147 525.4 330 81.8
Nitab4.5_0002901g0080 Nicotiana tabacum HOM05D005263 ORTHO05D006891 2.2e-141 506.1 298 85.9
Thecc.04G050600 Theobroma cacao HOM05D005263 ORTHO05D006891 3.7e-141 505.4 326 79.1
Gohir.A09G000300 Gossypium hirsutum HOM05D005263 ORTHO05D006891 1.8e-140 503.1 326 78.5
PGR142G1885 Punica granatum HOM05D005263 ORTHO05D006891 2.4e-140 502.7 299 84.6
Solyc02g094590.3 Solanum lycopersicum HOM05D005263 ORTHO05D006891 5.3e-140 501.5 294 86.4
Sopen02g039240 Solanum pennellii HOM05D005263 ORTHO05D006891 5.3e-140 501.5 294 86.4
Gorai.006G000100 Gossypium raimondii HOM05D005263 ORTHO05D006891 9.0e-140 500.7 326 78.5
Dinv33264 Davidia involucrata HOM05D005263 ORTHO05D006891 1.2e-139 500.4 323 81.1
Gohir.D09G000101 Gossypium hirsutum HOM05D005263 ORTHO05D006891 3.4e-139 498.8 326 78.2
CAN.G473.163 Capsicum annuum HOM05D005263 ORTHO05D006891 7.6e-139 497.7 303 82.2
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 2.2e-138 496.1 340 75.3
Peaxi162Scf00420g00940 Petunia axillaris HOM05D005263 ORTHO05D006891 2.9e-138 495.7 290 85.9
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 2.9e-138 495.7 321 80.7
Duzib147G0290 Durio zibethinus HOM05D005263 ORTHO05D006891 6.5e-138 494.6 322 78.6
CSS0005310 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 1.3e-135 486.9 295 84.1
Cpa.g.sc70.43 Carica papaya HOM05D005263 ORTHO05D006891 5.1e-135 485.0 337 75.7
Hma1.2p1_0265F.1_g106760 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 5.1e-135 485.0 299 82.6
MSTRG.3034 Avicennia marina HOM05D005263 ORTHO05D006891 6.7e-135 484.6 314 79.9
THA.LOC104821142 Tarenaya hassleriana HOM05D005263 ORTHO05D006891 6.7e-135 484.6 289 84.1
Nn4g22084 Nelumbo nucifera HOM05D005263 ORTHO05D006891 1.1e-134 483.8 333 77.8
Sabra02G0180900 Salix brachista HOM05D005263 ORTHO05D006891 1.9e-134 483.0 329 76.6
CARHR074870 Cardamine hirsuta HOM05D005263 ORTHO05D006891 7.4e-134 481.1 291 83.8
Thhalv10020076m.g Eutrema salsugineum HOM05D005263 ORTHO05D006891 1.7e-133 479.9 291 83.8
QL02p068698 Quercus lobata HOM05D005263 ORTHO05D006891 2.8e-133 479.2 332 76.2
Aa31LG5G11240 Aethionema arabicum HOM05D005263 ORTHO05D006891 1.1e-132 477.2 341 74.2
Potri.014G145000 Populus trichocarpa HOM05D005263 ORTHO05D006891 1.8e-132 476.5 312 79.8
Actinidia36248 Actinidia chinensis HOM05D005263 ORTHO05D006891 2.4e-132 476.1 300 79.7
TWI60G0166 Tripterygium wilfordii HOM05D005263 ORTHO05D006891 2.4e-132 476.1 310 78.7
EL10Ac6g13898 Beta vulgaris HOM05D005263 ORTHO05D006891 3.1e-132 475.7 294 82.0
Ciclev10017439m.g Citrus clementina HOM05D005263 ORTHO05D006891 3.1e-132 475.7 301 80.4
Potri.002G237400 Populus trichocarpa HOM05D005263 ORTHO05D006891 4.1e-132 475.3 290 83.1
Sc07g0003930 Simmondsia chinensis HOM05D005263 ORTHO05D006891 4.1e-132 475.3 293 80.5
AT3G02060 Arabidopsis thaliana HOM05D005263 ORTHO05D006891 6.9e-132 474.6 332 74.7
AL3G10030 Arabidopsis lyrata HOM05D005263 ORTHO05D006891 1.2e-131 473.8 291 82.8
Lj1g0009319 Lotus japonicus HOM05D005263 ORTHO05D006891 1.2e-131 473.8 300 80.7
Medtr7g084560 Medicago truncatula HOM05D005263 ORTHO05D006891 1.2e-131 473.8 334 76.9
Carub.0003s0003 Capsella rubella HOM05D005263 ORTHO05D006891 2.0e-131 473.0 291 82.8
Ca_08228_v3 Cicer arietinum L. HOM05D005263 ORTHO05D006891 4.5e-131 471.9 335 77.3
Sabra14G0109200 Salix brachista HOM05D005263 ORTHO05D006891 5.9e-131 471.5 306 79.7
SGA_v2.0_scaffold122G33171 Striga asiatica HOM05D005263 ORTHO05D006891 5.9e-131 471.5 319 77.1
ATR0582G042 Amborella trichopoda HOM05D005263 ORTHO05D006891 1.3e-130 470.3 307 78.5
Atru.chr6.2720 Acer truncatum HOM05D005263 ORTHO05D006891 2.2e-130 469.5 300 80.0
Haze_14959 Corylus avellana HOM05D005263 ORTHO05D006891 2.2e-130 469.5 345 74.2
vmacro22255 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 2.2e-130 469.5 321 75.1
Sp3g00030 Schrenkiella parvula HOM05D005263 ORTHO05D006891 2.9e-130 469.2 291 82.5
CiPaw.03G000200 Carya illinoinensis HOM05D005263 ORTHO05D006891 6.5e-130 468.0 291 82.8
arahy.Tifrunner.gnm1.ann1.J2Y82Q Arachis hypogaea HOM05D005263 ORTHO05D006891 1.1e-129 467.2 296 79.4
BcaNung05595 Brassica carinata HOM05D005263 ORTHO05D006891 4.2e-129 465.3 290 81.4
arahy.Tifrunner.gnm1.ann1.R16MRH Arachis hypogaea HOM05D005263 ORTHO05D006891 5.5e-129 464.9 296 79.4
CsaV3_5G021940 Cucumis sativus L. HOM05D005263 ORTHO05D006891 7.2e-129 464.5 293 80.5
Glyma.19G106000 Glycine max HOM05D005263 ORTHO05D006891 7.2e-129 464.5 299 79.9
PSO017G0637 Papaver somniferum HOM05D005263 ORTHO05D006891 7.2e-129 464.5 304 77.6
MELO3C005086.2 Cucumis melo HOM05D005263 ORTHO05D006891 9.4e-129 464.2 293 80.2
Lalb_Chr14g0363581 Lupinus albus HOM05D005263 ORTHO05D006891 4.7e-128 461.8 337 73.3
PSO478G0722 Papaver somniferum HOM05D005263 ORTHO05D006891 6.1e-128 461.5 304 77.3
Psat3g091960 Pisum sativum HOM05D005263 ORTHO05D006891 1.4e-127 460.3 298 79.9
Aqoxy5G03006 Aquilegia oxysepala HOM05D005263 ORTHO05D006891 3.0e-127 459.1 289 81.0
Glyma.16G046000 Glycine max HOM05D005263 ORTHO05D006891 3.0e-127 459.1 299 79.3
CANSAT64G2729 Cannabis sativa HOM05D005263 ORTHO05D006891 3.9e-127 458.8 296 78.4
Sed0001423 Sechium edule HOM05D005263 ORTHO05D006891 2.6e-126 456.1 293 78.2
TPR.G26435 Trifolium pratense HOM05D005263 ORTHO05D006891 7.4e-126 454.5 298 78.2
Eucgr.I01574 Eucalyptus grandis HOM05D005263 ORTHO05D006891 2.8e-125 452.6 262 85.9
RcHm_v2.0_Chr2g0176681 Rosa chinensis HOM05D005263 ORTHO05D006891 8.2e-125 451.1 295 78.0
Phvul.001G099500 Phaseolus vulgaris HOM05D005263 ORTHO05D006891 1.1e-124 450.7 299 77.6
Prupe.3G314900 Prunus persica HOM05D005263 ORTHO05D006891 1.1e-124 450.7 287 81.2
MD17G1004500 Malus domestica HOM05D005263 ORTHO05D006891 7.7e-123 444.5 299 76.3
FvH4_6g54430 Fragaria vesca HOM05D005263 ORTHO05D006891 7.2e-121 438.0 295 76.9
FAN02G2182 Fragaria x ananassa HOM05D005263 ORTHO05D006891 7.2e-121 438.0 295 76.9
FAN05G5194 Fragaria x ananassa HOM05D005263 ORTHO05D006891 4.7e-120 435.3 291 77.7
Lj7C619G12 Lonicera japonica HOM05D005263 ORTHO05D006891 2.3e-119 433.0 266 81.2
AUR62017472 Chenopodium quinoa HOM05D005263 ORTHO05D006891 1.1e-118 430.6 299 74.2
DCAR_000962 Daucus carota HOM05D005263 ORTHO05D006891 4.4e-118 428.7 289 77.2
FAN14G4399 Fragaria x ananassa HOM05D005263 ORTHO05D006891 2.0e-115 419.9 324 69.8
HPP92_009765 Vanilla planifolia HOM05D005263 ORTHO05D006891 3.2e-113 412.5 288 75.3
Hma1.2p1_0265F.1_g106770 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 1.8e-111 406.8 226 87.6
HanXRQChr14g0451541 Helianthus annuus HOM05D005263 ORTHO05D006891 5.7e-110 401.7 299 68.6
ECA238G3309 Erigeron canadensis HOM05D005263 ORTHO05D006891 1.3e-109 400.6 305 67.5
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 1.8e-108 396.7 301 69.1
ClCG01G007920 Citrullus lanatus HOM05D005263 ORTHO05D006891 7.2e-105 384.8 293 71.0
FAN09G0287 Fragaria x ananassa HOM05D005263 ORTHO05D006891 2.1e-104 383.3 296 69.6
HPP92_009750 Vanilla planifolia HOM05D005263 ORTHO05D006891 6.1e-104 381.7 286 70.6
Rhsim10G0000700 Rhododendron simsii HOM05D005263 ORTHO05D006891 8.0e-104 381.3 294 69.4
SEGI_32569 Sequoiadendron giganteum HOM05D005263 ORTHO05D006891 4.5e-99 365.5 288 66.3
FAN09G1249 Fragaria x ananassa HOM05D005263 ORTHO05D006891 8.6e-98 361.3 305 65.2
unitig_52.g17689 Utricularia gibba HOM05D005263 ORTHO05D006891 1.2e-86 324.3 261 65.5
GSVIVG01032955001 Vitis vinifera HOM05D005263 ORTHO05D006891 5.4e-84 315.5 175 88.6
AagrBONN_evm.TU.Sc2ySwM_117.63 Anthoceros agrestis HOM05D005263 ORTHO05D006891 1.2e-83 314.3 311 53.4
CDE02G2322 Ceratophyllum demersum HOM05D005263 ORTHO05D006891 6.0e-83 312.0 175 86.9
Mapoly0015s0011 Marchantia polymorpha HOM05D005263 ORTHO05D006891 6.0e-83 312.0 294 54.8
Cc07_g01440 Coffea canephora HOM05D005263 ORTHO05D006891 1.3e-82 310.8 175 87.4
BcaNung05596 Brassica carinata HOM05D005263 ORTHO05D006891 6.2e-80 302.0 175 84.6
BcaC01g05768 Brassica carinata HOM05D005263 ORTHO05D006891 5.4e-76 288.9 179 79.9
BolC9t52937H Brassica oleracea HOM05D005263 ORTHO05D006891 2.7e-75 286.6 291 58.1
Manes.11G073900 Manihot esculenta HOM05D005263 ORTHO05D006891 5.0e-74 282.3 157 86.6
SMO364G0436 Selaginella moellendorffii HOM05D005263 ORTHO05D006891 7.3e-73 278.5 238 60.1
Gohir.A09G000037 Gossypium hirsutum HOM05D005263 ORTHO05D006891 7.1e-60 235.3 125 92.0
SGA_v2.0_scaffold20G09129 Striga asiatica HOM05D005263 ORTHO05D006891 7.8e-59 231.9 191 67.5
Gohir.A09G000074 Gossypium hirsutum HOM05D005263 ORTHO05D006891 1.9e-52 210.7 169 66.3
Pp3c2_18110 Physcomitrium patens HOM05D005263 ORTHO05D006891 4.0e-47 193.0 238 47.5
CBR_g69987 Chara braunii HOM05D005263 ORTHO05D006891 1.3e-42 177.9 182 48.9
MCO01G164 Micromonas commoda HOM05D005263 ORTHO05D006891 9.0e-39 165.2 239 41.0
SalBow4G2620 Salvia bowleyana HOM05D005263 ORTHO05D006891 5.1e-34 149.4 80 91.2
unitig_52.g17690 Utricularia gibba HOM05D005263 ORTHO05D006891 1.9e-25 120.9 67 91.0
Actinidia09852 Actinidia chinensis HOM05D005263 ORTHO05D006891 3.3e-25 120.2 67 86.6
CBR_g56393 Chara braunii HOM05D000409 ORTHO05D000184 4.8e-24 116.3 85 64.7
Os11g0533100 Oryza sativa ssp. japonica HOM05D005263 ORTHO05D006891 1.3e-21 108.2 154 42.2
Thhalv10000760m.g Eutrema salsugineum HOM05D005236 ORTHO05D006557 6.3e-08 62.8 98 39.8
BcaC06g34177 Brassica carinata HOM05D005236 ORTHO05D006557 8.2e-08 62.4 98 39.8
C07p31870 Brassica napus HOM05D005236 ORTHO05D006557 8.2e-08 62.4 98 39.8
BolC7t43733H Brassica oleracea HOM05D005236 ORTHO05D006557 8.2e-08 62.4 98 39.8
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 1.1e-07 62.0 96 36.5
TPR.G36938 Trifolium pratense HOM05D005236 ORTHO05D006557 1.8e-07 61.2 84 42.9
BcaC06g31307 Brassica carinata HOM05D005236 ORTHO05D006557 2.4e-07 60.8 93 45.2
Carub.0005s0040 Capsella rubella HOM05D005236 ORTHO05D006557 2.4e-07 60.8 82 43.9
A06p44440 Brassica napus HOM05D005236 ORTHO05D006557 3.1e-07 60.5 93 40.9
BraA06t27318Z Brassica rapa HOM05D005236 ORTHO05D006557 3.1e-07 60.5 93 40.9
Aa31LG2G8500 Aethionema arabicum HOM05D005236 ORTHO05D006557 4.1e-07 60.1 98 40.8
Sp2g12880 Schrenkiella parvula HOM05D005236 ORTHO05D006557 4.1e-07 60.1 80 45.0
Solyc05g008040.4 Solanum lycopersicum HOM05D005236 ORTHO05D006557 4.1e-07 60.1 79 45.6
Sopen05g003880 Solanum pennellii HOM05D005236 ORTHO05D006557 4.1e-07 60.1 79 45.6
AL5G10420 Arabidopsis lyrata HOM05D005236 ORTHO05D006557 5.3e-07 59.7 76 46.1
AT2G01440 Arabidopsis thaliana HOM05D005236 ORTHO05D006557 5.3e-07 59.7 76 46.1
CARHR143960 Cardamine hirsuta HOM05D005236 ORTHO05D006557 5.3e-07 59.7 76 46.1
PSO017G4096 Papaver somniferum HOM05D005236 ORTHO05D006557 7.0e-07 59.3 77 44.2
Zm00001eb252400 Zea mays HOM05D005236 ORTHO05D006557 7.0e-07 59.3 92 42.4
TAR622G0787 Trochodendron aralioides HOM05D005236 ORTHO05D006557 9.1e-07 58.9 77 44.2
Cpa.g.sc65.143 Carica papaya HOM05D005236 ORTHO05D006557 1.2e-06 58.5 81 43.2
HanXRQChr15g0484551 Helianthus annuus HOM05D005236 ORTHO05D006557 1.2e-06 58.5 83 42.2
Zm00001eb113530 Zea mays HOM05D005263 ORTHO05D006891 1.2e-06 58.5 40 65.0
AagrBONN_evm.TU.Sc2ySwM_368.2128 Anthoceros agrestis HOM05D005236 ORTHO05D006557 1.5e-06 58.2 80 41.2
Cc11_g08660 Coffea canephora HOM05D005236 ORTHO05D006557 1.5e-06 58.2 77 44.2
Mapoly0024s0015 Marchantia polymorpha HOM05D005236 ORTHO05D006557 1.5e-06 58.2 85 43.5
FAN17G1995 Fragaria x ananassa HOM05D005236 ORTHO05D006557 2.6e-06 57.4 90 37.8
Psat6g043400 Pisum sativum HOM05D005236 ORTHO05D006557 2.6e-06 57.4 71 47.9
unitig_52.g17382 Utricularia gibba HOM05D005236 ORTHO05D006557 2.6e-06 57.4 77 45.5
Duzib251G0654 Durio zibethinus HOM05D005236 ORTHO05D006557 3.5e-06 57.0 77 44.2
Lsat_1_v5_gn_3_54941 Lactuca sativa HOM05D005236 ORTHO05D006557 3.5e-06 57.0 77 44.2
Sed0013091 Sechium edule HOM05D005236 ORTHO05D006557 3.5e-06 57.0 90 38.9
Atru.chr11.574_Atru.chr11.575 Acer truncatum HOM05D005236 ORTHO05D006557 4.5e-06 56.6 80 42.5
Gohir.A03G121000 Gossypium hirsutum HOM05D005236 ORTHO05D006557 4.5e-06 56.6 77 44.2
Gohir.D02G144400 Gossypium hirsutum HOM05D005236 ORTHO05D006557 4.5e-06 56.6 77 44.2
Gorai.005G161600 Gossypium raimondii HOM05D005236 ORTHO05D006557 4.5e-06 56.6 77 44.2
Lj3C872G3 Lonicera japonica HOM05D005236 ORTHO05D006557 4.5e-06 56.6 77 44.2
Nn4g24162 Nelumbo nucifera HOM05D005236 ORTHO05D006557 4.5e-06 56.6 71 46.5
Oeu003384.3 Olea europaea HOM05D005236 ORTHO05D006557 4.5e-06 56.6 77 42.9
Sc14g0007110 Simmondsia chinensis HOM05D005236 ORTHO05D006557 4.5e-06 56.6 77 44.2
CSS0043470 Camellia sinensis var. sinensis HOM05D005236 ORTHO05D006557 5.9e-06 56.2 76 44.7
ECA246G1132 Erigeron canadensis HOM05D005236 ORTHO05D006557 5.9e-06 56.2 77 44.2
MBI10_g08556_MAGBIO Magnolia biondii HOM05D005236 ORTHO05D006557 5.9e-06 56.2 71 46.5
CAN.G1298.25 Capsicum annuum HOM05D005236 ORTHO05D006557 7.7e-06 55.8 79 43.0
AUR62014143 Chenopodium quinoa HOM05D005236 ORTHO05D006557 7.7e-06 55.8 79 43.0
ClCG07G006520 Citrullus lanatus HOM05D005236 ORTHO05D006557 7.7e-06 55.8 77 42.9
MELO3C018322.2 Cucumis melo HOM05D005236 ORTHO05D006557 7.7e-06 55.8 77 42.9
Manes.15G127900 Manihot esculenta HOM05D005236 ORTHO05D006557 7.7e-06 55.8 71 45.1
Pp3c19_21980 Physcomitrium patens HOM05D005236 ORTHO05D006557 7.7e-06 55.8 81 42.0
Thecc.02G282100 Theobroma cacao HOM05D005236 ORTHO05D006557 7.7e-06 55.8 77 42.9
TWI79G0143 Tripterygium wilfordii HOM05D005236 ORTHO05D006557 7.7e-06 55.8 77 42.9


User provided reference genes

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