Gene: Solyc02g094590.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g094590.3
- Transcript Identifier Solyc02g094590.3.1
- Gene Type Coding gene
- Location SL4.0ch02 : 53219125-53236102 : positive
Gene Family Information
- ID HOM05D005263
- #Genes/#Species 144/92
- Phylogenetic origin
- ID ORTHO05D006891
- #Genes/#Species 137/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc02g094590.3.1
- uniprot A0A3Q7FCD3
- gene_id Solyc02g094590
Descriptions
- Description Transcription-repair-coupling factor (AHRD V3.3 *** A0A1J3HTX1_NOCCA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005118 | Transcription-repair-coupling factor, C-terminal domain |
| IPR037235 | TRCF-like, C-terminal D7 domai |
| IPR036101 | CarD-like/TRCF domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR003711 | CarD-like/TRCF domain |
| IPR001650 | Helicase, C-terminal |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |