Gene: Sopen05g003880

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g003880
  • Transcript Identifier Sopen05g003880.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 2674622-2691885 : positive

Gene Family Information

  • ID HOM05D005236
  • #Genes/#Species 144/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g003880.1

Descriptions

  • Description DEAD/DEAH box RNA helicase family protein | FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding | INVOLVED IN: DNA repair, DNA recombination | EXPRESSED IN: 12 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal , Nucleic acid-binding, OB-fold-like , DNA helicase, ATP-dependent, RecG , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006310
IEA
InterProDNA recombination
GO:0000002
ISO
PLAZA Integrative Orthologymitochondrial genome maintenance AT2G01440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003678
IEA
InterProDNA helicase activity
GO:0015616
ISO
PLAZA Integrative OrthologyDNA translocase activity AT2G01440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G01440
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G01440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
IPR012340 Nucleic acid-binding, OB-fold
IPR004609 ATP-dependent DNA helicase RecG
Mapman id Description
13.5.8.2 Cell cycle organisation.organellar DNA replication.genome stability maintenance.DNA translocase (RecG)