Gene: Sopen02g039240

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g039240
  • Transcript Identifier Sopen02g039240.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 59601917-59618827 : positive

Gene Family Information

  • ID HOM05D005263
  • #Genes/#Species 144/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g039240.1

Descriptions

  • Description DEAD/DEAH box helicase, putative | FUNCTIONS IN: in 6 functions | INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent | LOCATED IN: chloroplast | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , Transcription factor CarD , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037235 TRCF-like, C-terminal D7 domai
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036101 CarD-like/TRCF domain superfamily
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR003711 CarD-like/TRCF domain
IPR005118 Transcription-repair-coupling factor, C-terminal domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated