Gene: AT2G01440

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G01440
  • Transcript Identifier AT2G01440.1
  • Gene Type Coding gene
  • Location Chr2 : 193950-199056 : negative

Gene Family Information

  • ID HOM05D005236
  • #Genes/#Species 144/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G01440.1
  • Alias RECG,Arabidopsis homolog of bacterial RecG
  • uniprot F4INA9

Descriptions

  • Description DEAD/DEAH box RNA helicase family protein
  • Computational description DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IMP
IBA
Gene OntologyDNA repair1 2
GO:0006281
IEA
InterProDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0000002
IMP
Gene Ontologymitochondrial genome maintenance2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0003678
IBA
Gene OntologyDNA helicase activity1
GO:0003678
IEA
InterProDNA helicase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0015616
IGI
Gene OntologyDNA translocase activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
Gene Ontologychloroplast2
GO:0005739
IDA
Gene Ontologymitochondrion2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR004609 ATP-dependent DNA helicase RecG
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
13.5.8.2 Cell cycle organisation.organellar DNA replication.genome stability maintenance.DNA translocase (RecG)