Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu044139.1 Olea europaea HOM05D002785 ORTHO05D003042 3.7e-128 461.5 221 100.0
Migut.M01943 Erythranthe guttata HOM05D002785 ORTHO05D003042 1.3e-85 320.1 225 68.9
Sopen02g018700 Solanum pennellii HOM05D002785 ORTHO05D003042 9.7e-84 313.9 227 64.8
Solyc02g069570.3 Solanum lycopersicum HOM05D002785 ORTHO05D003042 1.6e-83 313.2 227 64.8
SalBow8G1087 Salvia bowleyana HOM05D002785 ORTHO05D003042 1.4e-82 310.1 225 66.2
SalBow8G2824 Salvia bowleyana HOM05D002785 ORTHO05D003042 1.4e-82 310.1 225 66.2
CAN.G675.28 Capsicum annuum HOM05D002785 ORTHO05D003042 5.3e-82 308.1 227 64.3
CSS0011878 Camellia sinensis var. sinensis HOM05D002785 ORTHO05D003042 9.0e-82 307.4 225 64.9
SGA_v2.0_scaffold298G47642 Striga asiatica HOM05D002785 ORTHO05D000003 3.4e-81 305.4 225 64.9
MSTRG.7571 Avicennia marina HOM05D002785 ORTHO05D003042 4.5e-81 305.1 225 66.7
Dinv05937 Davidia involucrata HOM05D002785 ORTHO05D003042 1.2e-78 297.0 242 60.7
GSVIVG01021752001 Vitis vinifera HOM05D002785 ORTHO05D003042 2.3e-77 292.7 225 62.7
Prupe.4G101500 Prunus persica HOM05D002785 ORTHO05D003042 6.7e-77 291.2 225 63.1
Peaxi162Scf00195g00522 Petunia axillaris HOM05D002785 ORTHO05D003042 5.7e-76 288.1 227 60.8
ClCG01G008850 Citrullus lanatus HOM05D002785 ORTHO05D003042 1.7e-75 286.6 225 61.8
Ciclev10014133m.g Citrus clementina HOM05D002785 ORTHO05D003042 2.2e-75 286.2 227 61.7
Rhsim13G0125900 Rhododendron simsii HOM05D002785 ORTHO05D003042 4.8e-75 285.0 240 60.4
CiPaw.10G110800 Carya illinoinensis HOM05D002785 ORTHO05D003042 6.3e-75 284.6 225 62.2
MD05G1264100 Malus domestica HOM05D002785 ORTHO05D003042 1.8e-74 283.1 225 61.3
vmacro03460 Vaccinium macrocarpon HOM05D002785 ORTHO05D003042 3.1e-74 282.3 225 59.6
MBI18_g27150_MAGBIO Magnolia biondii HOM05D002785 ORTHO05D003042 9.1e-74 280.8 225 59.6
MELO3C021816.2 Cucumis melo HOM05D002785 ORTHO05D003042 1.5e-73 280.0 225 60.9
CsaV3_1G037710 Cucumis sativus L. HOM05D002785 ORTHO05D003042 1.5e-73 280.0 225 60.9
Sed0002443 Sechium edule HOM05D002785 ORTHO05D003042 3.4e-73 278.9 225 59.6
QL05p064786 Quercus lobata HOM05D002785 ORTHO05D003042 5.9e-73 278.1 221 61.5
CANSAT35G1290 Cannabis sativa HOM05D002785 ORTHO05D003042 2.2e-72 276.2 225 58.7
DCAR_007810 Daucus carota HOM05D002785 ORTHO05D003042 2.9e-72 275.8 227 59.9
Nn3g20311 Nelumbo nucifera HOM05D002785 ORTHO05D003042 6.5e-72 274.6 221 59.7
arahy.Tifrunner.gnm1.ann1.NB2J4N Arachis hypogaea HOM05D002785 ORTHO05D003042 1.4e-71 273.5 225 57.3
Lj1C1157G2 Lonicera japonica HOM05D002785 ORTHO05D003042 1.4e-71 273.5 225 60.4
Sed0027329 Sechium edule HOM05D002785 ORTHO05D003042 5.5e-71 271.6 225 60.0
COL.COLO4_19340 Corchorus olitorius HOM05D002785 ORTHO05D003042 9.4e-71 270.8 225 60.9
arahy.Tifrunner.gnm1.ann1.WQB6IM Arachis hypogaea HOM05D002785 ORTHO05D003042 1.6e-70 270.0 225 56.9
Atru.chr3.2242 Acer truncatum HOM05D002785 ORTHO05D003042 2.7e-70 269.2 227 59.0
THA.LOC104812694 Tarenaya hassleriana HOM05D002785 ORTHO05D003042 3.6e-70 268.9 260 51.5
Oeu008977.1 Olea europaea HOM05D002785 ORTHO05D003042 7.9e-70 267.7 225 63.6
AL1G44660 Arabidopsis lyrata HOM05D002785 ORTHO05D003042 1.0e-69 267.3 225 56.9
Thhalv10006701m.g Eutrema salsugineum HOM05D002785 ORTHO05D003042 1.4e-69 266.9 225 56.9
PSO675G7541 Papaver somniferum HOM05D002785 ORTHO05D003042 1.8e-69 266.5 225 56.0
PSO675G2450 Papaver somniferum HOM05D002785 ORTHO05D003042 3.9e-69 265.4 225 56.0
Sc02g0003170 Simmondsia chinensis HOM05D002785 ORTHO05D003042 3.9e-69 265.4 225 57.3
BcaC05g27084 Brassica carinata HOM05D002785 ORTHO05D003042 5.2e-69 265.0 226 56.6
Sp1g26510 Schrenkiella parvula HOM05D002785 ORTHO05D003042 5.2e-69 265.0 225 56.0
AT1G30610 Arabidopsis thaliana HOM05D002785 ORTHO05D003042 8.8e-69 264.2 225 56.0
FAN21G2235 Fragaria x ananassa HOM05D002785 ORTHO05D003042 1.1e-68 263.8 225 59.1
BcaNung05822 Brassica carinata HOM05D002785 ORTHO05D003042 1.5e-68 263.5 226 56.2
C05p29670 Brassica napus HOM05D002785 ORTHO05D003042 1.5e-68 263.5 226 56.2
BolC5t31696H Brassica oleracea HOM05D002785 ORTHO05D003042 1.5e-68 263.5 226 56.2
BcaB07g32701 Brassica carinata HOM05D002785 ORTHO05D003042 2.6e-68 262.7 225 56.4
A09p35810 Brassica napus HOM05D002785 ORTHO05D003042 2.6e-68 262.7 226 57.5
BraA09t39104Z Brassica rapa HOM05D002785 ORTHO05D003042 2.6e-68 262.7 226 57.5
Carub.0001s2887 Capsella rubella HOM05D002785 ORTHO05D003042 7.4e-68 261.2 225 57.3
CARHR030050 Cardamine hirsuta HOM05D002785 ORTHO05D003042 1.1e-66 257.3 225 55.1
TWI63G0524 Tripterygium wilfordii HOM05D002785 ORTHO05D003042 1.4e-66 256.9 225 54.2
Nitab4.5_0006230g0020 Nicotiana tabacum HOM05D002785 ORTHO05D003042 8.5e-64 247.7 227 53.3
ATR0165G017 Amborella trichopoda HOM05D002785 ORTHO05D003042 1.9e-63 246.5 225 52.4
HPP92_013191 Vanilla planifolia HOM05D002785 ORTHO05D003042 2.5e-63 246.1 225 53.3
AUR62014930 Chenopodium quinoa HOM05D002785 ORTHO05D003042 4.2e-63 245.4 227 52.9
Duzib128G1174 Durio zibethinus HOM05D002785 ORTHO05D003042 5.5e-63 245.0 225 54.2
AUR62017862 Chenopodium quinoa HOM05D002785 ORTHO05D003042 1.2e-62 243.8 227 52.9
EL10Ac6g15330 Beta vulgaris HOM05D002785 ORTHO05D003042 1.8e-61 240.0 227 51.5
AUR62003548 Chenopodium quinoa HOM05D002785 ORTHO05D003042 1.8e-61 240.0 227 52.0
Potri.001G459900 Populus trichocarpa HOM05D002785 ORTHO05D003042 9.7e-60 234.2 225 52.9
Cfa000764 Carpinus fangiana HOM05D002785 ORTHO05D003042 1.7e-59 233.4 225 52.0
Thecc.10G003200 Theobroma cacao HOM05D002785 ORTHO05D003042 2.2e-59 233.0 225 52.0
Manes.14G126700 Manihot esculenta HOM05D002785 ORTHO05D003042 2.8e-59 232.6 225 50.7
Lj3g0000529 Lotus japonicus HOM05D002785 ORTHO05D003042 4.8e-59 231.9 225 50.7
Ca_10009_v3 Cicer arietinum L. HOM05D002785 ORTHO05D003042 1.1e-58 230.7 225 51.1
Nitab4.5_0001219g0070 Nicotiana tabacum HOM05D002785 ORTHO05D003042 5.3e-58 228.4 227 51.5
Aa31LG6G11850 Aethionema arabicum HOM05D002785 ORTHO05D003042 9.1e-58 227.6 225 51.1
Medtr0001s0430 Medicago truncatula HOM05D002785 ORTHO05D003042 1.2e-57 227.3 225 50.7
Zm00001eb360170 Zea mays HOM05D002785 ORTHO05D003042 2.0e-57 226.5 221 50.2
Lalb_Chr19g0140081 Lupinus albus HOM05D002785 ORTHO05D003042 2.7e-57 226.1 227 48.5
Os01g0674700 Oryza sativa ssp. japonica HOM05D002785 ORTHO05D003042 2.7e-57 226.1 221 49.3
Gohir.A10G242200 Gossypium hirsutum HOM05D002785 ORTHO05D003042 3.5e-57 225.7 227 50.2
Aqoxy4G00056 Aquilegia oxysepala HOM05D002785 ORTHO05D003042 5.9e-57 224.9 225 50.2
Cc09_g07030 Coffea canephora HOM05D002785 ORTHO05D003042 5.9e-57 224.9 172 61.0
Lsat_1_v5_gn_4_51020 Lactuca sativa HOM05D002785 ORTHO05D003042 7.7e-57 224.6 227 52.9
Haze_05954 Corylus avellana HOM05D002785 ORTHO05D003042 2.2e-56 223.0 174 61.5
ECA234G1849 Erigeron canadensis HOM05D002785 ORTHO05D003042 2.9e-56 222.6 227 51.1
HanXRQChr03g0090051 Helianthus annuus HOM05D002785 ORTHO05D003042 5.0e-56 221.9 175 61.7
Glyma.11G110600 Glycine max HOM05D002785 ORTHO05D003042 1.1e-55 220.7 225 49.3
CDE05G2152 Ceratophyllum demersum HOM05D002785 ORTHO05D003042 1.9e-55 219.9 225 48.4
TAR624G1101 Trochodendron aralioides HOM05D002785 ORTHO05D003042 1.9e-55 219.9 174 60.9
TAR624G1304 Trochodendron aralioides HOM05D002785 ORTHO05D003042 2.5e-55 219.5 174 60.9
FvH4_3g11350 Fragaria vesca HOM05D002785 ORTHO05D003042 4.2e-55 218.8 225 52.9
FAN16G0575 Fragaria x ananassa HOM05D002785 ORTHO05D003042 4.2e-55 218.8 225 52.9
VMungo1127G0626 Vigna mungo HOM05D002785 ORTHO05D003042 2.1e-54 216.5 225 48.0
Gorai.011G295200 Gossypium raimondii HOM05D002785 ORTHO05D003042 3.6e-54 215.7 225 48.4
RcHm_v2.0_Chr5g0018311 Rosa chinensis HOM05D002785 ORTHO05D003042 3.6e-54 215.7 172 62.2
Phvul.011G017600 Phaseolus vulgaris HOM05D002785 ORTHO05D003042 4.7e-54 215.3 225 48.9
Gohir.D10G254200 Gossypium hirsutum HOM05D002785 ORTHO05D003042 8.0e-54 214.5 225 48.0
Eucgr.D01024 Eucalyptus grandis HOM05D002785 ORTHO05D003042 1.0e-53 214.2 175 57.7
TPR.G9829 Trifolium pratense HOM05D002785 ORTHO05D003042 1.8e-53 213.4 253 45.5
PGR083G1445 Punica granatum HOM05D002785 ORTHO05D003042 2.3e-53 213.0 225 47.6
PGSC0003DMG400021200 Solanum tuberosum HOM05D002785 ORTHO05D003042 8.8e-53 211.1 145 66.9
Sabra16G0311700 Salix brachista HOM05D002785 ORTHO05D003042 1.4e-50 203.8 225 47.6
Hma1.2p1_0159F.1_g070480 Hydrangea macrophylla HOM05D002785 ORTHO05D003042 3.8e-48 195.7 173 56.1
HPP92_024499 Vanilla planifolia HOM05D002785 ORTHO05D003042 5.4e-34 148.7 232 37.1
Sc03g0002420 Simmondsia chinensis HOM05D002785 ORTHO05D003042 5.6e-31 138.7 229 35.8
QL06p039535 Quercus lobata HOM05D002785 ORTHO05D003042 7.3e-31 138.3 228 34.2
Solyc02g092310.4 Solanum lycopersicum HOM05D002785 ORTHO05D003042 2.8e-30 136.3 231 33.8
CDE02G3670 Ceratophyllum demersum HOM05D002785 ORTHO05D003042 6.2e-30 135.2 147 46.3
Sopen02g036880 Solanum pennellii HOM05D002785 ORTHO05D003042 6.2e-30 135.2 231 33.8
Sabra07G0003500 Salix brachista HOM05D002785 ORTHO05D003042 5.2e-29 132.1 229 33.6
Sp2g29080 Schrenkiella parvula HOM05D002785 ORTHO05D003042 8.9e-29 131.3 227 32.2
Nitab4.5_0004025g0050 Nicotiana tabacum HOM05D002785 ORTHO05D003042 3.4e-28 129.4 231 33.3
PGSC0003DMG400021442 Solanum tuberosum HOM05D002785 ORTHO05D003042 5.8e-28 128.6 230 32.6
Lj7A99T39 Lonicera japonica HOM05D002785 ORTHO05D003042 9.8e-28 127.9 236 33.1
EL10Ac6g15614 Beta vulgaris HOM05D002785 ORTHO05D003042 6.4e-27 125.2 223 35.0
CAN.G1075.41 Capsicum annuum HOM05D002785 ORTHO05D003042 6.0e-25 118.6 230 31.3
Nitab4.5_0000142g0100 Nicotiana tabacum HOM05D002785 ORTHO05D003042 6.0e-25 118.6 230 31.7
Peaxi162Scf00548g00537 Petunia axillaris HOM05D002785 ORTHO05D003042 1.0e-24 117.9 231 32.9
ECA232G0485 Erigeron canadensis HOM05D002785 ORTHO05D003042 1.5e-23 114.0 220 33.6
SEGI_41190 Sequoiadendron giganteum HOM05D002785 ORTHO05D003042 4.7e-22 109.0 149 38.3
Cpa.g.sc285.7 Carica papaya HOM05D002785 ORTHO05D003042 1.1e-21 107.8 64 76.6
TPR.G24212 Trifolium pratense HOM05D002785 ORTHO05D003042 2.3e-21 106.7 185 31.9
Hund16403 Selenicereus undatus HOM05D002785 ORTHO05D003042 1.2e-20 104.4 193 30.6
SEGI_12126 Sequoiadendron giganteum HOM05D002785 ORTHO05D003042 1.5e-20 104.0 148 38.5
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 2.6e-20 103.2 217 30.0
Psat0s2645g0080 Pisum sativum HOM05D002785 ORTHO05D003042 6.4e-19 98.6 64 68.8
DCAR_027182 Daucus carota HOM05D002785 ORTHO05D003042 1.4e-18 97.4 230 30.9
MD10G1242100 Malus domestica HOM05D002785 ORTHO05D003042 7.1e-18 95.1 121 46.3
Ca_22104_v3 Cicer arietinum L. HOM05D002785 ORTHO05D003042 3.0e-16 89.7 148 31.8
Dinv05934 Davidia involucrata HOM05D000022 ORTHO05D000306 3.0e-16 89.7 66 63.6
Eucgr.H02309 Eucalyptus grandis HOM05D002785 ORTHO05D003042 6.6e-16 88.6 146 33.6
Medtr4g097120 Medicago truncatula HOM05D002785 ORTHO05D003042 1.5e-15 87.4 148 33.1
BcaC01g04060 Brassica carinata HOM05D002785 ORTHO05D003042 1.9e-15 87.0 73 49.3
C03p59620 Brassica napus HOM05D002785 ORTHO05D003042 5.6e-15 85.5 168 31.0
Cpa.g.sc6.12 Carica papaya HOM05D002785 ORTHO05D003042 9.5e-15 84.7 108 41.7
Aqoxy5G00864 Aquilegia oxysepala HOM05D002785 ORTHO05D003042 1.6e-14 84.0 137 34.3
FvH4_1g17780 Fragaria vesca HOM05D002785 ORTHO05D003042 1.6e-14 84.0 158 34.2
FAN19G3227 Fragaria x ananassa HOM05D002785 ORTHO05D003042 1.6e-14 84.0 158 34.2
BcaNung05861 Brassica carinata HOM05D002785 ORTHO05D003042 2.8e-14 83.2 148 32.4
QL07p012105 Quercus lobata HOM05D002785 ORTHO05D000077 2.8e-14 83.2 61 60.7
A06p32850 Brassica napus HOM05D002785 ORTHO05D003042 1.1e-13 81.3 149 32.2
BraA06t26217Z Brassica rapa HOM05D002785 ORTHO05D003042 1.1e-13 81.3 149 32.2
Pp3c23_13490 Physcomitrium patens HOM05D002785 ORTHO05D003042 1.1e-13 81.3 138 34.8
RcHm_v2.0_Chr2g0108231 Rosa chinensis HOM05D002785 ORTHO05D003042 1.4e-13 80.9 158 32.9
Manes.13G111300 Manihot esculenta HOM05D002785 ORTHO05D003042 1.8e-13 80.5 145 31.7
AL8G43730 Arabidopsis lyrata HOM05D002785 ORTHO05D003042 2.3e-13 80.1 148 29.7
ATR1153G029 Amborella trichopoda HOM05D002785 ORTHO05D003042 3.1e-13 79.7 136 31.6
AT5G67570 Arabidopsis thaliana HOM05D002785 ORTHO05D003042 4.0e-13 79.3 148 29.7
Carub.0008s2690 Capsella rubella HOM05D002785 ORTHO05D003042 4.0e-13 79.3 148 29.7
Cc07_g07130 Coffea canephora HOM05D002785 ORTHO05D003042 5.2e-13 79.0 136 30.9
FAN28G1616 Fragaria x ananassa HOM05D002785 ORTHO05D003042 5.2e-13 79.0 158 32.9
BcaB02g09912 Brassica carinata HOM05D002785 ORTHO05D003042 1.2e-12 77.8 148 30.4
CARHR280020 Cardamine hirsuta HOM05D002785 ORTHO05D003042 1.2e-12 77.8 148 29.7
C03p45510 Brassica napus HOM05D002785 ORTHO05D003042 1.5e-12 77.4 60 53.3
Lj4g0009360 Lotus japonicus HOM05D002785 ORTHO05D003042 1.5e-12 77.4 148 29.7
MD02G1186800 Malus domestica HOM05D002785 ORTHO05D003042 5.8e-12 75.5 172 31.4
Aa31LG1G16120 Aethionema arabicum HOM05D002785 ORTHO05D003042 1.3e-11 74.3 131 32.1
Pp3c10_24670 Physcomitrium patens HOM05D002785 ORTHO05D003042 2.2e-11 73.6 136 33.1
Pp3c10_24680 Physcomitrium patens HOM05D002785 ORTHO05D003042 2.2e-11 73.6 136 33.1
Zm00001eb065550 Zea mays HOM05D002785 ORTHO05D003042 4.9e-11 72.4 152 30.3
unitig_0.g502 Utricularia gibba HOM05D002785 ORTHO05D003042 6.4e-11 72.0 100 40.0
Mapoly0090s0080 Marchantia polymorpha HOM05D002785 ORTHO05D003042 8.4e-11 71.6 104 33.7
CDE06G2475 Ceratophyllum demersum HOM05D002785 ORTHO05D003042 1.9e-10 70.5 130 28.5
SGA_v2.0_scaffold15G07462 Striga asiatica HOM05D002785 ORTHO05D003042 2.1e-09 67.0 149 28.2
AagrBONN_evm.TU.Sc2ySwM_369.228 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.3e-07 59.3 205 22.9
GSVIVG01004304001 Vitis vinifera HOM05D002785 ORTHO05D003042 5.6e-07 58.9 108 32.4
AagrBONN_evm.TU.Sc2ySwM_228.3424 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.6e-06 57.4 230 23.9
AagrBONN_evm.TU.Sc2ySwM_362.122 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.8e-06 56.6 191 24.6
SEGI_41107 Sequoiadendron giganteum HOM05D002785 ORTHO05D003042 2.8e-06 56.6 65 44.6
Potri.016G085300 Populus trichocarpa HOM05D000855 ORTHO05D008530 3.6e-06 56.2 190 25.8
AagrBONN_evm.TU.Sc2ySwM_228.168 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.7e-06 55.8 230 24.3
PSO170G2984 Papaver somniferum HOM05D000001 ORTHO05D000003 4.7e-06 55.8 90 38.9
AagrBONN_evm.TU.Sc2ySwM_368.2645 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.2e-06 55.5 204 22.5
Eucgr.B01749 Eucalyptus grandis HOM05D000001 ORTHO05D000003 6.2e-06 55.5 173 27.7
FvH4_3g03080 Fragaria vesca HOM05D000891 ORTHO05D000761 8.1e-06 55.1 189 24.9
Nn3g19601 Nelumbo nucifera HOM05D000001 ORTHO05D011479 8.1e-06 55.1 217 21.2


User provided reference genes

Program Settings