Gene: HPP92_013191

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_013191
  • Transcript Identifier Vpl06Ag13191.1
  • Gene Type Coding gene
  • Location CM028155.1 : 9850804-9858903 : negative

Gene Family Information

  • ID HOM05D002785
  • #Genes/#Species 248/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl06Ag13191.1
  • pid KAG0476350.1

Descriptions

  • Description Pentatricopeptide repeat-containing protein ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
IEA
InterProchloroplast organization
GO:0010098
ISO
PLAZA Integrative Orthologysuspensor development AT1G30610
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy Zm00001eb065550
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression Zm00001eb065550
GO:0042793
ISO
PLAZA Integrative Orthologyplastid transcription AT5G67570
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT1G30610

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G30610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast Zm00001eb065550

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044645 Pentatricopeptide repeat-containing protein DG1/EMB2279-like
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.5.10 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial mRNA processing factor (SOT5)