Gene: Nitab4.5_0004025g0050

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0004025g0050
  • Transcript Identifier Nitab4.5_0004025g0050.1
  • Gene Type Coding gene
  • Location Nitab4.5_0004025 : 223308-228586 : positive

Gene Family Information

  • ID HOM05D002785
  • #Genes/#Species 248/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0004025g0050.1
  • SR1-identifier Nta03g14720.1

Descriptions

  • Description Pentatricopeptide repeat, Tetratricopeptide-like helical
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
IEA
InterProchloroplast organization
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy Zm00001eb065550
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression Zm00001eb065550
GO:0042793
ISO
PLAZA Integrative Orthologyplastid transcription AT5G67570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast Zm00001eb065550

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR044645 Pentatricopeptide repeat-containing protein DG1/EMB2279-like
Mapman id Description
16.11.5.11 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial mRNA processing factor (DG1)