Gene: SGA_v2.0_scaffold298G47642

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold298G47642
  • Transcript Identifier SGA_v2.0_scaffold298T47642
  • Gene Type Coding gene
  • Location scaffold298 : 87171-95224 : negative

Gene Family Information

  • ID HOM05D002785
  • #Genes/#Species 248/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010098
ISO
PLAZA Integrative Orthologysuspensor development AT1G30610
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G30610
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT1G30610
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G30610

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G30610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G30610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.3.3.4.36 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (DEK36)
16.11.5.10 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial mRNA processing factor (SOT5)