Gene: Sopen02g036880

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g036880
  • Transcript Identifier Sopen02g036880.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 57816201-57821420 : negative

Gene Family Information

  • ID HOM05D002785
  • #Genes/#Species 248/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g036880.1

Descriptions

  • Description Encodes a pentratricopeptide repeat containing protein that is targeted to the chloroplast. Mutants have pale young leave and reduced accumulation of plastid encoded transcripts suggesting a role for DG1 in regulation of plastid gene expression. | DELAYED GREENING 1 (DG1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: chloroplast organization, embryo development ending in seed dormancy | LOCATED IN: chloroplast | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
IEA
InterProchloroplast organization
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy Zm00001eb065550
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression Zm00001eb065550
GO:0042793
ISO
PLAZA Integrative Orthologyplastid transcription AT5G67570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast Zm00001eb065550

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR044645 Pentatricopeptide repeat-containing protein DG1/EMB2279-like
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.5.11 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial mRNA processing factor (DG1)