Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038169.3 Olea europaea HOM05D001366 ORTHO05D005449 5.3e-87 324.3 165 100.0
Oeu040884.1 Olea europaea HOM05D001366 ORTHO05D005449 6.8e-42 174.5 165 61.2
MSTRG.27758 Avicennia marina HOM05D001366 ORTHO05D005449 6.4e-40 167.9 165 58.8
SalBow6G3832 Salvia bowleyana HOM05D001366 ORTHO05D005449 3.2e-39 165.6 165 58.8
SalBow6G5818 Salvia bowleyana HOM05D001366 ORTHO05D005449 3.2e-39 165.6 165 58.8
Sabra05G0119200 Salix brachista HOM05D001366 ORTHO05D005449 4.1e-39 165.2 165 60.0
SalBow3G1925 Salvia bowleyana HOM05D001366 ORTHO05D005449 9.2e-39 164.1 165 58.2
Rhsim02G0071900 Rhododendron simsii HOM05D001366 ORTHO05D005449 1.2e-38 163.7 165 58.2
DCAR_006444 Daucus carota HOM05D001366 ORTHO05D005449 1.6e-38 163.3 165 58.2
Migut.N01147 Erythranthe guttata HOM05D001366 ORTHO05D005449 1.6e-38 163.3 165 57.6
Glyma.14G183100 Glycine max HOM05D001366 ORTHO05D005449 1.6e-38 163.3 165 58.2
Hma1.2p1_0125F.1_g058680 Hydrangea macrophylla HOM05D001366 ORTHO05D005449 2.1e-38 162.9 165 58.2
SGA_v2.0_scaffold337G49194 Striga asiatica HOM05D001366 ORTHO05D005449 2.1e-38 162.9 165 58.2
Lalb_Chr23g0269931 Lupinus albus HOM05D001366 ORTHO05D005449 2.7e-38 162.5 165 57.6
Manes.18G057000 Manihot esculenta HOM05D001366 ORTHO05D005449 2.7e-38 162.5 165 58.2
Psat2g064960 Pisum sativum HOM05D001366 ORTHO05D005449 3.5e-38 162.2 165 58.2
THA.LOC104815469 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 3.5e-38 162.2 165 58.2
TAR625G0060 Trochodendron aralioides HOM05D001366 ORTHO05D005449 3.5e-38 162.2 165 58.2
Aqoxy2G03242 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 4.6e-38 161.8 165 57.6
CSS0026904 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 4.6e-38 161.8 165 57.0
Rhsim07G0213700 Rhododendron simsii HOM05D001366 ORTHO05D005449 4.6e-38 161.8 165 57.6
Cc10_g08370 Coffea canephora HOM05D001366 ORTHO05D005449 6.0e-38 161.4 165 57.0
Prupe.1G536300 Prunus persica HOM05D001366 ORTHO05D005449 6.0e-38 161.4 165 57.6
Glyma.02G216100 Glycine max HOM05D001366 ORTHO05D005449 7.8e-38 161.0 165 57.6
Phvul.008G183300 Phaseolus vulgaris HOM05D001366 ORTHO05D005449 7.8e-38 161.0 165 57.6
Aa31LG4G9540 Aethionema arabicum HOM05D001366 ORTHO05D005449 1.0e-37 160.6 165 57.6
BcaC06g32884 Brassica carinata HOM05D001366 ORTHO05D005449 1.0e-37 160.6 165 57.6
BolC7t45851H Brassica oleracea HOM05D001366 ORTHO05D005449 1.0e-37 160.6 165 57.6
Carub.0007s1663 Capsella rubella HOM05D001366 ORTHO05D005449 1.0e-37 160.6 165 57.6
Gohir.A05G216500 Gossypium hirsutum HOM05D001366 ORTHO05D005449 1.0e-37 160.6 165 58.2
LjContig00408g0006754 Lotus japonicus HOM05D001366 ORTHO05D005449 1.0e-37 160.6 165 57.6
CSS0031876 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 1.3e-37 160.2 165 56.4
Gorai.009G278800 Gossypium raimondii HOM05D001366 ORTHO05D005449 1.3e-37 160.2 165 57.6
MBI19_g32700_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D005449 1.3e-37 160.2 165 57.0
Nn1g05642 Nelumbo nucifera HOM05D001366 ORTHO05D005449 1.3e-37 160.2 165 57.0
Peaxi162Scf00160g00913 Petunia axillaris HOM05D001366 ORTHO05D005449 1.3e-37 160.2 165 57.0
Actinidia29656 Actinidia chinensis HOM05D001366 ORTHO05D005449 1.7e-37 159.8 165 56.4
HanXRQChr10g0277741 Helianthus annuus HOM05D001366 ORTHO05D005449 1.7e-37 159.8 165 55.8
AL7G28780 Arabidopsis lyrata HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
AT4G24440 Arabidopsis thaliana HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
MSTRG.5323 Avicennia marina HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 56.4
BcaNung05637 Brassica carinata HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
A03p55290 Brassica napus HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
C07p53590 Brassica napus HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
BraA03t14588Z Brassica rapa HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
COL.COLO4_35286 Corchorus olitorius HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
Thhalv10026637m.g Eutrema salsugineum HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
FvH4_5g34180 Fragaria vesca HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
FAN04G2369 Fragaria x ananassa HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 56.4
FAN18G2982 Fragaria x ananassa HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
Nitab4.5_0000885g0060 Nicotiana tabacum HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 56.4
PSO700G0345 Papaver somniferum HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 56.4
Sp7g22400 Schrenkiella parvula HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 57.0
Sed0016266 Sechium edule HOM05D001366 ORTHO05D005449 2.3e-37 159.5 165 56.4
Aqoxy6G00666 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 3.0e-37 159.1 165 56.4
CiPaw.07G162800 Carya illinoinensis HOM05D001366 ORTHO05D005449 3.0e-37 159.1 165 56.4
Ciclev10002917m.g Citrus clementina HOM05D001366 ORTHO05D005449 3.0e-37 159.1 165 56.4
Lalb_Chr08g0242611 Lupinus albus HOM05D001366 ORTHO05D005449 3.0e-37 159.1 165 57.0
Os05g0107700 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 3.0e-37 159.1 165 57.0
PSO013G0324 Papaver somniferum HOM05D001366 ORTHO05D005449 3.0e-37 159.1 165 56.4
Potri.005G151700 Populus trichocarpa HOM05D001366 ORTHO05D005449 3.0e-37 159.1 165 56.4
Sed0015347 Sechium edule HOM05D001366 ORTHO05D005449 3.0e-37 159.1 165 55.8
PSO832G3977 Papaver somniferum HOM05D001366 ORTHO05D005449 3.9e-37 158.7 165 55.8
GSVIVG01009213001 Vitis vinifera HOM05D001366 ORTHO05D005449 3.9e-37 158.7 165 56.4
ATR0691G175 Amborella trichopoda HOM05D001366 ORTHO05D005449 5.1e-37 158.3 165 56.4
CANSAT25G2801 Cannabis sativa HOM05D001366 ORTHO05D005449 5.1e-37 158.3 165 56.4
Gohir.A05G264200 Gossypium hirsutum HOM05D001366 ORTHO05D005449 5.1e-37 158.3 165 57.0
Medtr7g005540 Medicago truncatula HOM05D001366 ORTHO05D005449 5.1e-37 158.3 165 56.4
Nitab4.5_0000354g0080 Nicotiana tabacum HOM05D001366 ORTHO05D005449 5.1e-37 158.3 165 56.4
SGA_v2.0_scaffold219G42523 Striga asiatica HOM05D001366 ORTHO05D005449 5.1e-37 158.3 163 57.1
Atru.chr11.619 Acer truncatum HOM05D001366 ORTHO05D005449 6.6e-37 157.9 165 55.8
BcaC09g50868 Brassica carinata HOM05D001366 ORTHO05D003220 6.6e-37 157.9 164 56.1
C01p19760 Brassica napus HOM05D001366 ORTHO05D003220 6.6e-37 157.9 164 56.1
BolC1t01904H Brassica oleracea HOM05D001366 ORTHO05D003220 6.6e-37 157.9 164 56.1
Gohir.D05G266700 Gossypium hirsutum HOM05D001366 ORTHO05D005449 6.6e-37 157.9 165 57.0
Lalb_Chr11g0064851 Lupinus albus HOM05D001366 ORTHO05D005449 6.6e-37 157.9 165 56.4
PGSC0003DMG400002052 Solanum tuberosum HOM05D001366 ORTHO05D005449 6.6e-37 157.9 165 56.4
arahy.Tifrunner.gnm1.ann1.8785AP Arachis hypogaea HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 55.8
arahy.Tifrunner.gnm1.ann1.CRNC3Y Arachis hypogaea HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 55.8
arahy.Tifrunner.gnm1.ann1.HU70H8 Arachis hypogaea HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 55.8
CAN.G1104.8 Capsicum annuum HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 56.4
Haze_22489 Corylus avellana HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 55.8
Gohir.D05G220900 Gossypium hirsutum HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 56.4
Gorai.009G228000 Gossypium raimondii HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 56.4
PSO761G0276 Papaver somniferum HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 55.8
Solyc12g088030.2 Solanum lycopersicum HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 56.4
Sopen12g030060 Solanum pennellii HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 56.4
Thecc.08G074000 Theobroma cacao HOM05D001366 ORTHO05D005449 8.6e-37 157.5 165 56.4
A08p21460 Brassica napus HOM05D001366 ORTHO05D005449 1.1e-36 157.1 165 56.4
BolC8t48576H Brassica oleracea HOM05D001366 ORTHO05D005449 1.1e-36 157.1 165 56.4
BraA08t34095Z Brassica rapa HOM05D001366 ORTHO05D005449 1.1e-36 157.1 165 56.4
CARHR231830 Cardamine hirsuta HOM05D001366 ORTHO05D005449 1.1e-36 157.1 165 55.8
CiPaw.08G057200 Carya illinoinensis HOM05D001366 ORTHO05D005449 1.1e-36 157.1 165 55.8
CsaV3_2G033350 Cucumis sativus L. HOM05D001366 ORTHO05D005449 1.1e-36 157.1 165 55.2
ECA240G3991 Erigeron canadensis HOM05D001366 ORTHO05D005449 1.1e-36 157.1 165 56.4
PGR042G3224 Punica granatum HOM05D001366 ORTHO05D005449 1.1e-36 157.1 165 55.8
CsaV3_2G033370 Cucumis sativus L. HOM05D001366 ORTHO05D005449 1.5e-36 156.8 165 54.5
Eucgr.F00436 Eucalyptus grandis HOM05D001366 ORTHO05D005449 1.5e-36 156.8 165 56.4
RcHm_v2.0_Chr7g0233761 Rosa chinensis HOM05D001366 ORTHO05D005449 1.5e-36 156.8 165 56.4
arahy.Tifrunner.gnm1.ann1.T41BVH Arachis hypogaea HOM05D001366 ORTHO05D005449 1.9e-36 156.4 165 55.8
ClCG11G014700 Citrullus lanatus HOM05D001366 ORTHO05D005449 1.9e-36 156.4 165 55.2
MELO3C008106.2 Cucumis melo HOM05D001366 ORTHO05D005449 1.9e-36 156.4 165 54.5
Duzib041G0019 Durio zibethinus HOM05D001366 ORTHO05D005449 1.9e-36 156.4 165 55.2
HanXRQChr03g0063191 Helianthus annuus HOM05D001366 ORTHO05D005449 1.9e-36 156.4 165 55.2
Lsat_1_v5_gn_6_107360 Lactuca sativa HOM05D001366 ORTHO05D005449 1.9e-36 156.4 164 55.5
Cpa.g.sc21.43 Carica papaya HOM05D001366 ORTHO05D005449 2.5e-36 156.0 165 55.8
THA.LOC104799853 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 2.5e-36 156.0 165 55.8
A01p15810 Brassica napus HOM05D001366 ORTHO05D003220 3.3e-36 155.6 163 55.8
BraA01t01516Z Brassica rapa HOM05D001366 ORTHO05D003220 3.3e-36 155.6 163 55.8
Atru.chr13.973 Acer truncatum HOM05D001366 ORTHO05D005449 4.3e-36 155.2 165 54.5
TWI73G1055 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 5.6e-36 154.8 165 55.8
HPP92_010288 Vanilla planifolia HOM05D001366 ORTHO05D005449 5.6e-36 154.8 164 54.3
Hund07854 Selenicereus undatus HOM05D001366 ORTHO05D005449 7.3e-36 154.5 165 55.8
TWI09G0135 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 7.3e-36 154.5 165 55.2
Zm00001eb356100 Zea mays HOM05D001366 ORTHO05D005449 7.3e-36 154.5 165 54.5
MSTRG.16686 Avicennia marina HOM05D001366 ORTHO05D005449 9.6e-36 154.1 164 53.7
TPR.G15622 Trifolium pratense HOM05D001366 ORTHO05D005449 9.6e-36 154.1 163 55.8
EL10Ac9g20840 Beta vulgaris HOM05D001366 ORTHO05D005449 1.2e-35 153.7 165 55.2
unitig_22.g6842 Utricularia gibba HOM05D001366 ORTHO05D005449 1.2e-35 153.7 165 53.9
EL10Ac8g20405 Beta vulgaris HOM05D001366 ORTHO05D005449 2.1e-35 152.9 165 54.5
Ah.01g003970 Amaranthus hybridus HOM05D001366 ORTHO05D005449 8.1e-35 151.0 165 53.3
Zm00001eb139900 Zea mays HOM05D001366 ORTHO05D005449 8.1e-35 151.0 162 54.3
TPR.G38776 Trifolium pratense HOM05D001366 ORTHO05D005449 1.4e-34 150.2 165 53.9
Medtr5g066740 Medicago truncatula HOM05D001366 ORTHO05D005449 2.6e-33 146.0 165 51.5
Os01g0970500 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 4.4e-33 145.2 162 51.9
TWI56G0439 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 2.9e-32 142.5 165 51.5
Psat0s2399g0160 Pisum sativum HOM05D001366 ORTHO05D005449 1.0e-29 134.0 162 47.5
SHI29728 Sapria himalayana HOM05D001366 ORTHO05D005449 1.0e-29 134.0 165 50.9
ECA246G1742 Erigeron canadensis HOM05D001366 ORTHO05D005449 1.7e-29 133.3 156 50.0
AUR62017035 Chenopodium quinoa HOM05D001366 ORTHO05D005449 2.3e-29 132.9 152 53.3
MD08G1203900 Malus domestica HOM05D001366 ORTHO05D005449 2.3e-29 132.9 152 52.6
Actinidia19254 Actinidia chinensis HOM05D001366 ORTHO05D005449 6.6e-29 131.3 165 46.7
Duzib116G0949 Durio zibethinus HOM05D001366 ORTHO05D005449 1.6e-27 126.7 165 47.3
Lsat_1_v5_gn_7_43741 Lactuca sativa HOM05D001366 ORTHO05D005449 8.1e-27 124.4 141 52.5
TAR381G0322 Trochodendron aralioides HOM05D001366 ORTHO05D005449 8.1e-27 124.4 165 46.1
Mapoly0012s0108 Marchantia polymorpha HOM05D001366 ORTHO05D005449 2.9e-24 115.9 165 39.4
Pp3c9_10830 Physcomitrium patens HOM05D001366 ORTHO05D005449 8.4e-24 114.4 165 40.0
Pp3c15_13540 Physcomitrium patens HOM05D001366 ORTHO05D005449 1.9e-23 113.2 165 39.4
Dinv42590 Davidia involucrata HOM05D001366 ORTHO05D005449 5.4e-23 111.7 68 85.3
AagrBONN_evm.TU.Sc2ySwM_228.5579 Anthoceros agrestis HOM05D001366 ORTHO05D005449 1.2e-22 110.5 165 38.2
AagrBONN_evm.TU.Sc2ySwM_228.3950 Anthoceros agrestis HOM05D001366 ORTHO05D005449 3.5e-22 109.0 165 38.2
Ca_08744_v3 Cicer arietinum L. HOM05D001366 ORTHO05D005449 3.5e-22 109.0 62 91.9
QL09p018667 Quercus lobata HOM05D001366 ORTHO05D005449 1.0e-21 107.5 62 90.3
vmacro04625 Vaccinium macrocarpon HOM05D001366 ORTHO05D005449 2.3e-21 106.3 61 90.2
VMungo0647G1399 Vigna mungo HOM05D001366 ORTHO05D005449 3.0e-21 105.9 61 90.2
SMO169G0007 Selaginella moellendorffii HOM05D001366 ORTHO05D005449 6.7e-21 104.8 164 36.6
Lsat_1_v5_gn_4_60280 Lactuca sativa HOM05D001366 ORTHO05D005449 1.6e-19 100.1 60 85.0
Migut.B00439 Erythranthe guttata HOM05D001366 ORTHO05D005449 1.1e-18 97.4 165 38.2
Actinidia19617 Actinidia chinensis HOM05D001366 ORTHO05D005449 6.9e-18 94.7 129 46.5
unitig_8.g3420 Utricularia gibba HOM05D001366 ORTHO05D005449 1.1e-15 87.4 151 38.4
HanXRQChr05g0143271 Helianthus annuus HOM05D001366 ORTHO05D005449 1.4e-15 87.0 50 86.0
AUR62014838 Chenopodium quinoa HOM05D001366 ORTHO05D005449 9.3e-15 84.3 57 73.7
RcHm_v2.0_Chr5g0012851 Rosa chinensis HOM05D001366 ORTHO05D005449 9.3e-15 84.3 165 35.2
AagrBONN_evm.TU.Sc2ySwM_368.1269 Anthoceros agrestis HOM05D001366 ORTHO05D005449 6.7e-13 78.2 161 30.4
Lsat_1_v5_gn_8_150280 Lactuca sativa HOM05D001675 ORTHO05D004161 2.5e-12 76.3 47 83.0
C06p07570 Brassica napus HOM05D001366 ORTHO05D005449 1.3e-11 73.9 165 37.6
BolC6t35845H Brassica oleracea HOM05D001366 ORTHO05D005449 1.3e-11 73.9 165 37.6
Haze_27711 Corylus avellana HOM05D001366 ORTHO05D005449 1.3e-11 73.9 157 28.7
BcaC08g43388 Brassica carinata HOM05D001366 ORTHO05D005449 2.0e-09 66.6 142 35.9
HanXRQChr11g0353851 Helianthus annuus HOM05D001366 ORTHO05D005449 3.4e-09 65.9 36 86.1
Mapoly0067s0078 Marchantia polymorpha HOM05D001366 ORTHO05D005449 2.9e-08 62.8 137 30.7
Lsat_1_v5_gn_8_45161 Lactuca sativa HOM05D001675 ORTHO05D001808 4.9e-08 62.0 39 82.1
TAR374G0947 Trochodendron aralioides HOM05D000025 ORTHO05D000040 1.4e-07 60.5 36 72.2


User provided reference genes

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