Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033987.1 Olea europaea HOM05D005462 ORTHO05D006718 1.0e-60 238.4 117 100.0
Nitab4.5_0003787g0050 Nicotiana tabacum HOM05D005462 ORTHO05D006718 5.6e-38 162.9 111 71.2
Nitab4.5_0001047g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.2e-37 161.8 113 71.7
Cc02_g09510 Coffea canephora HOM05D005462 ORTHO05D006718 1.6e-37 161.4 109 74.3
Peaxi162Scf00125g00414 Petunia axillaris HOM05D005462 ORTHO05D006718 2.1e-37 161.0 113 72.6
Migut.F00860 Erythranthe guttata HOM05D005462 ORTHO05D006718 3.6e-37 160.2 113 69.0
MSTRG.27558 Avicennia marina HOM05D005462 ORTHO05D006718 1.4e-36 158.3 96 79.2
CAN.G143.13 Capsicum annuum HOM05D005462 ORTHO05D006718 4.0e-36 156.8 113 69.0
PGSC0003DMG402007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 8.9e-36 155.6 111 70.3
Sopen11g002610 Solanum pennellii HOM05D005462 ORTHO05D006718 2.6e-35 154.1 111 70.3
Dinv08599 Davidia involucrata HOM05D005462 ORTHO05D006718 3.4e-35 153.7 90 80.0
Solyc11g006680.3 Solanum lycopersicum HOM05D005462 ORTHO05D006718 3.4e-35 153.7 111 69.4
Lj2C34T7 Lonicera japonica HOM05D005462 ORTHO05D006718 4.1e-33 146.7 113 63.7
SalBow3G0159 Salvia bowleyana HOM05D005462 ORTHO05D006718 3.5e-32 143.7 81 81.5
DCAR_028403 Daucus carota HOM05D005462 ORTHO05D006718 4.6e-32 143.3 113 65.5
ECA232G2701 Erigeron canadensis HOM05D005462 ORTHO05D006718 7.8e-32 142.5 87 74.7
Cfa010538 Carpinus fangiana HOM05D005462 ORTHO05D006718 1.0e-31 142.1 109 64.2
Peaxi162Scf00195g01111 Petunia axillaris HOM05D005462 ORTHO05D006718 1.3e-31 141.7 111 64.0
PGSC0003DMG400016997 Solanum tuberosum HOM05D005462 ORTHO05D006718 1.7e-31 141.4 101 69.3
Haze_03474 Corylus avellana HOM05D005462 ORTHO05D006718 3.9e-31 140.2 115 64.3
Sopen04g004840 Solanum pennellii HOM05D005462 ORTHO05D006718 6.6e-31 139.4 101 68.3
FAN06G4410 Fragaria x ananassa HOM05D005462 ORTHO05D006718 8.6e-31 139.0 116 62.9
FAN10G0457 Fragaria x ananassa HOM05D005462 ORTHO05D006718 8.6e-31 139.0 116 64.7
MBI01_g28355_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 8.6e-31 139.0 81 79.0
Cpa.g.sc1114.1 Carica papaya HOM05D005462 ORTHO05D006718 1.1e-30 138.7 110 64.5
CSS0015574 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 1.9e-30 137.9 89 74.2
FAN03G2522 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.9e-30 137.9 102 67.6
RcHm_v2.0_Chr1g0336351 Rosa chinensis HOM05D005462 ORTHO05D006718 2.5e-30 137.5 101 67.3
Duzib128G2019 Durio zibethinus HOM05D005462 ORTHO05D006718 3.3e-30 137.1 114 61.4
FvH4_7g06690 Fragaria vesca HOM05D005462 ORTHO05D006718 3.3e-30 137.1 116 62.1
Actinidia03844 Actinidia chinensis HOM05D005462 ORTHO05D006718 4.3e-30 136.7 106 67.0
CAN.G186.57 Capsicum annuum HOM05D005462 ORTHO05D006718 4.3e-30 136.7 112 62.5
QL04p046981 Quercus lobata HOM05D005462 ORTHO05D006718 4.3e-30 136.7 111 62.2
Thecc.10G115600 Theobroma cacao HOM05D005462 ORTHO05D006718 4.3e-30 136.7 112 60.7
Solyc04g009730.4 Solanum lycopersicum HOM05D005462 ORTHO05D006718 7.3e-30 136.0 101 67.3
Medtr1g048080 Medicago truncatula HOM05D005462 ORTHO05D006718 1.6e-29 134.8 111 58.6
HanXRQChr11g0321471 Helianthus annuus HOM05D005462 ORTHO05D006718 2.8e-29 134.0 109 61.5
HanXRQChr11g0321421 Helianthus annuus HOM05D005462 ORTHO05D006718 3.6e-29 133.7 109 61.5
Prupe.2G071400 Prunus persica HOM05D005462 ORTHO05D006718 3.6e-29 133.7 103 67.0
PGR142G1862 Punica granatum HOM05D005462 ORTHO05D006718 3.6e-29 133.7 110 63.6
GSVIVG01034651001 Vitis vinifera HOM05D005462 ORTHO05D006718 3.6e-29 133.7 94 71.3
Lsat_1_v5_gn_9_53421 Lactuca sativa HOM05D005462 ORTHO05D006718 4.7e-29 133.3 86 72.1
Nn2g14251 Nelumbo nucifera HOM05D005462 ORTHO05D006718 4.7e-29 133.3 111 63.1
TAR636G3557 Trochodendron aralioides HOM05D005462 ORTHO05D006718 4.7e-29 133.3 100 67.0
Eucgr.G02683 Eucalyptus grandis HOM05D005462 ORTHO05D006718 6.2e-29 132.9 100 65.0
MD07G1061700 Malus domestica HOM05D005462 ORTHO05D006718 6.2e-29 132.9 99 64.6
Aqoxy4G02697 Aquilegia oxysepala HOM05D005462 ORTHO05D006718 1.4e-28 131.7 120 56.7
Gohir.A13G009500 Gossypium hirsutum HOM05D005462 ORTHO05D006718 1.4e-28 131.7 113 60.2
arahy.Tifrunner.gnm1.ann1.LTKS6Y Arachis hypogaea HOM05D005462 ORTHO05D006718 2.3e-28 131.0 119 53.8
CANSAT56G2776 Cannabis sativa HOM05D005462 ORTHO05D006718 4.0e-28 130.2 82 74.4
Gohir.D13G010200 Gossypium hirsutum HOM05D005462 ORTHO05D006718 4.0e-28 130.2 115 60.0
Gorai.013G010900 Gossypium raimondii HOM05D005462 ORTHO05D006718 4.0e-28 130.2 115 60.0
arahy.Tifrunner.gnm1.ann1.D9T4RB Arachis hypogaea HOM05D005462 ORTHO05D006718 5.2e-28 129.8 119 53.8
Psat0s3982g0040 Pisum sativum HOM05D005462 ORTHO05D006718 5.2e-28 129.8 110 55.5
TWI15G0792 Tripterygium wilfordii HOM05D005462 ORTHO05D006718 5.2e-28 129.8 81 71.6
Atru.chr12.1058 Acer truncatum HOM05D005462 ORTHO05D006718 6.8e-28 129.4 108 62.0
Lj6g0019256 Lotus japonicus HOM05D005462 ORTHO05D006718 6.8e-28 129.4 107 57.0
Potri.010G241300 Populus trichocarpa HOM05D005462 ORTHO05D006718 6.8e-28 129.4 87 69.0
Sed0013359 Sechium edule HOM05D005462 ORTHO05D006718 6.8e-28 129.4 97 67.0
CiPaw.13G042600 Carya illinoinensis HOM05D005462 ORTHO05D006718 2.6e-27 127.5 103 60.2
Hund06792 Selenicereus undatus HOM05D005462 ORTHO05D006718 3.4e-27 127.1 95 65.3
Glyma.10G122100 Glycine max HOM05D005462 ORTHO05D006718 4.4e-27 126.7 111 56.8
Potri.008G017400 Populus trichocarpa HOM05D005462 ORTHO05D006718 4.4e-27 126.7 115 60.9
Sabra10G0188800 Salix brachista HOM05D005462 ORTHO05D006718 4.4e-27 126.7 115 58.3
TPR.G19815 Trifolium pratense HOM05D005462 ORTHO05D006718 5.8e-27 126.3 113 54.0
A10p31410 Brassica napus HOM05D005462 ORTHO05D006718 7.5e-27 125.9 99 61.6
BraA10t45187Z Brassica rapa HOM05D005462 ORTHO05D006718 7.5e-27 125.9 99 61.6
Ca_13242_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 7.5e-27 125.9 111 57.7
Ca_30156_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 7.5e-27 125.9 111 57.7
ClCG05G021870 Citrullus lanatus HOM05D005462 ORTHO05D006718 7.5e-27 125.9 96 63.5
MELO3C012341.2 Cucumis melo HOM05D005462 ORTHO05D006718 7.5e-27 125.9 88 68.2
Manes.07G085300 Manihot esculenta HOM05D005462 ORTHO05D006718 7.5e-27 125.9 113 59.3
C09p72080 Brassica napus HOM05D005462 ORTHO05D006718 9.8e-27 125.6 119 54.6
BolC9t59953H Brassica oleracea HOM05D005462 ORTHO05D006718 9.8e-27 125.6 119 54.6
Glyma.20G074200 Glycine max HOM05D005462 ORTHO05D006718 9.8e-27 125.6 86 64.0
Sc09g0005160 Simmondsia chinensis HOM05D005462 ORTHO05D006718 1.3e-26 125.2 78 75.6
CDE06G1106 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 2.9e-26 124.0 116 56.9
AUR62021021 Chenopodium quinoa HOM05D005462 ORTHO05D006718 2.9e-26 124.0 114 57.9
Sp6g38020 Schrenkiella parvula HOM05D005462 ORTHO05D006718 2.9e-26 124.0 92 64.1
AL6G14460 Arabidopsis lyrata HOM05D005462 ORTHO05D006718 3.7e-26 123.6 91 62.6
AUR62018420 Chenopodium quinoa HOM05D005462 ORTHO05D006718 3.7e-26 123.6 114 57.9
Aa31LG11G5620 Aethionema arabicum HOM05D005462 ORTHO05D000003 6.4e-26 122.9 83 67.5
CsaV3_5G035270 Cucumis sativus L. HOM05D005462 ORTHO05D006718 6.4e-26 122.9 86 68.6
AT5G04810 Arabidopsis thaliana HOM05D005462 ORTHO05D006718 8.3e-26 122.5 90 63.3
BcaC06g32185 Brassica carinata HOM05D005462 ORTHO05D006718 8.3e-26 122.5 112 57.1
VMungo0720G0270 Vigna mungo HOM05D005462 ORTHO05D006718 8.3e-26 122.5 81 67.9
Lalb_Chr01g0010721 Lupinus albus HOM05D005462 ORTHO05D006718 1.1e-25 122.1 115 54.8
SGA_v2.0_scaffold329G48874 Striga asiatica HOM05D005462 ORTHO05D006718 1.1e-25 122.1 96 63.5
Phvul.007G234900 Phaseolus vulgaris HOM05D005462 ORTHO05D006718 1.4e-25 121.7 80 67.5
Sabra08G0010900 Salix brachista HOM05D005462 ORTHO05D006718 1.4e-25 121.7 95 63.2
Ah.04g150500 Amaranthus hybridus HOM05D005462 ORTHO05D006718 1.9e-25 121.3 114 56.1
EL10Ac3g07311 Beta vulgaris HOM05D005462 ORTHO05D006718 1.9e-25 121.3 109 56.9
Thhalv10012596m.g Eutrema salsugineum HOM05D005462 ORTHO05D006718 1.9e-25 121.3 90 63.3
ATR0772G220 Amborella trichopoda HOM05D005462 ORTHO05D006718 2.4e-25 120.9 74 73.0
THA.LOC104823152 Tarenaya hassleriana HOM05D005462 ORTHO05D006718 2.4e-25 120.9 108 58.3
Carub.0006s0369 Capsella rubella HOM05D005462 ORTHO05D006718 4.1e-25 120.2 86 66.3
PSO339G2458 Papaver somniferum HOM05D005462 ORTHO05D006718 4.1e-25 120.2 75 74.7
PSO384G2581 Papaver somniferum HOM05D005462 ORTHO05D006718 4.1e-25 120.2 75 74.7
CARHR208470 Cardamine hirsuta HOM05D005462 ORTHO05D006718 7.1e-25 119.4 90 63.3
HPP92_027469 Vanilla planifolia HOM05D005462 ORTHO05D006718 2.3e-23 114.4 109 56.9
Zm00001eb434090 Zea mays HOM05D005462 ORTHO05D006718 5.1e-23 113.2 109 55.0
Oeu033283.1 Olea europaea HOM05D005462 ORTHO05D006718 5.6e-22 109.8 57 89.5
vmacro07266 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 8.1e-21 105.9 55 85.5
vmacro05136 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 3.7e-18 97.1 69 71.0
SEGI_04507 Sequoiadendron giganteum HOM05D005462 ORTHO05D006718 1.5e-14 85.1 113 39.8
AagrBONN_evm.TU.Sc2ySwM_362.2024 Anthoceros agrestis HOM05D005462 ORTHO05D006718 2.8e-13 80.9 91 42.9
BolC9t55910H Brassica oleracea HOM05D003366 ORTHO05D004045 6.2e-13 79.7 74 55.4
Pp3c16_280 Physcomitrium patens HOM05D005462 ORTHO05D006718 8.1e-13 79.3 113 37.2
C09p30460 Brassica napus HOM05D003366 ORTHO05D004045 6.8e-12 76.3 59 61.0
HPP92_013817 Vanilla planifolia HOM05D005462 ORTHO05D006718 6.8e-12 76.3 81 54.3
Pp3c5_10110 Physcomitrium patens HOM05D005462 ORTHO05D006718 1.3e-10 72.0 72 36.1
Mapoly0061s0009 Marchantia polymorpha HOM05D005462 ORTHO05D006718 1.1e-09 68.9 67 49.3
CDE06G2100 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 5.1e-07 60.1 40 67.5
CDE06G0092 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 2.5e-06 57.8 39 66.7


User provided reference genes

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