Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 5.4e-273 943.7 482 100.0
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 6.5e-109 398.7 355 58.3
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 2.6e-105 386.7 353 59.8
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 9.7e-105 384.8 364 58.5
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 3.7e-104 382.9 320 63.8
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 4.8e-104 382.5 320 61.2
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 1.1e-103 381.3 364 58.0
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 3.1e-103 379.8 365 58.6
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 1.3e-101 374.4 320 62.5
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 6.5e-101 372.1 311 62.1
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.5e-100 370.9 320 61.2
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.5e-100 370.2 360 56.4
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 2.5e-100 370.2 328 58.5
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 9.4e-100 368.2 358 57.0
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.2e-99 367.9 332 59.6
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 1.2e-99 367.9 355 57.5
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 2.1e-99 367.1 358 54.7
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 8.0e-99 365.2 375 53.3
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.0e-98 364.8 355 55.2
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 2.3e-98 363.6 327 57.5
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 3.0e-98 363.2 365 56.4
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 2.4e-95 353.6 324 56.8
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 1.3e-93 347.8 360 53.1
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 1.7e-93 347.4 354 53.1
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 2.2e-93 347.1 311 59.5
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 2.9e-93 346.7 358 53.9
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 5.0e-93 345.9 311 60.1
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 8.5e-93 345.1 364 51.1
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.9e-92 344.0 358 52.0
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.9e-92 344.0 365 53.7
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 3.2e-92 343.2 346 52.0
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 4.2e-92 342.8 343 52.2
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 5.5e-92 342.4 358 55.9
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 9.4e-92 341.7 358 52.5
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 2.1e-91 340.5 359 51.0
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 6.1e-91 339.0 355 52.7
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 1.8e-90 337.4 359 50.4
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 4.0e-90 336.3 356 51.4
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 8.8e-90 335.1 362 49.4
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.5e-89 334.3 358 51.7
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.5e-89 334.3 366 51.1
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 1.5e-89 334.3 367 50.1
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 5.7e-89 332.4 366 51.1
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 2.8e-88 330.1 308 58.4
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 4.8e-88 329.3 374 51.1
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.3e-88 328.9 280 60.4
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 6.3e-88 328.9 344 53.2
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 6.3e-88 328.9 344 53.2
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 6.3e-88 328.9 321 56.1
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 1.1e-87 328.2 319 55.5
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.1e-87 328.2 304 57.6
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 3.1e-87 326.6 349 55.3
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 3.1e-87 326.6 354 50.6
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 4.1e-87 326.2 310 55.5
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 5.4e-87 325.9 355 51.5
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.2e-86 324.7 366 53.0
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 2.0e-86 323.9 354 52.8
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 2.7e-86 323.6 358 50.3
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 3.5e-86 323.2 355 49.6
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 4.5e-86 322.8 323 54.2
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 5.9e-86 322.4 344 52.9
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 5.9e-86 322.4 379 49.9
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.1e-84 318.2 362 49.2
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.5e-84 315.8 362 48.6
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 5.5e-84 315.8 350 52.3
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 1.8e-82 310.8 369 49.6
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 4.0e-82 309.7 366 48.4
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 1.7e-80 304.3 358 49.7
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 1.7e-80 304.3 361 49.6
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 2.8e-80 303.5 370 50.3
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.1e-79 301.6 364 48.9
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 1.4e-79 301.2 357 48.2
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 1.8e-79 300.8 368 51.6
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 4.1e-79 299.7 373 48.5
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 2.7e-78 297.0 323 52.9
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 4.5e-78 296.2 314 51.3
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 5.9e-78 295.8 343 51.9
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 7.8e-78 295.4 350 47.7
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.7e-77 294.3 358 49.2
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 2.3e-77 293.9 339 51.0
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 4.3e-76 289.7 366 49.5
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 4.3e-76 289.7 366 49.5
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 8.9e-74 282.0 308 52.6
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 2.0e-73 280.8 297 47.5
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.1e-71 275.0 434 40.8
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 1.2e-70 271.6 361 42.7
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 3.9e-69 266.5 271 52.4
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 2.0e-65 254.2 299 46.8
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 2.4e-63 247.3 529 34.0
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 2.1e-62 244.2 324 41.7
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 6.6e-61 239.2 270 45.9
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 3.2e-55 220.3 222 52.3
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 4.7e-51 206.5 320 36.2
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 5.2e-50 203.0 204 55.9
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 6.8e-50 202.6 222 50.9
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 5.8e-49 199.5 185 61.6
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 9.3e-47 192.2 378 33.3
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 4.6e-46 189.9 116 74.1
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 6.0e-46 189.5 330 37.6
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 4.0e-42 176.8 151 58.3
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.4e-41 173.7 174 51.7
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 5.6e-36 156.4 202 48.0
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 2.8e-35 154.1 152 51.3
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 3.6e-35 153.7 172 47.1
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 8.7e-29 132.5 101 53.5
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 3.7e-27 127.1 113 60.2
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.0e-25 121.3 250 37.2
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 2.6e-25 120.9 118 55.1
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 4.8e-19 100.1 141 39.7
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 9.7e-12 75.9 112 33.0


User provided reference genes

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