Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu026510.1 Olea europaea HOM05D000104 ORTHO05D025749 1.9e-95 352.4 175 100.0
Oeu042797.1 Olea europaea HOM05D000104 ORTHO05D006391 2.3e-64 249.2 135 93.3
SGA_v2.0_scaffold39G15292 Striga asiatica HOM05D000104 ORTHO05D006391 6.3e-62 241.1 140 85.0
MSTRG.10001 Avicennia marina HOM05D000104 ORTHO05D006391 7.7e-60 234.2 135 86.7
MSTRG.4011 Avicennia marina HOM05D000104 ORTHO05D006391 3.8e-59 231.9 134 88.1
Sopen01g031470 Solanum pennellii HOM05D000104 ORTHO05D006391 6.5e-59 231.1 134 86.6
Solyc01g079690.4 Solanum lycopersicum HOM05D000104 ORTHO05D006391 1.5e-58 229.9 134 85.8
Actinidia40166 Actinidia chinensis HOM05D000104 ORTHO05D006391 1.6e-57 226.5 134 83.6
Dinv44505 Davidia involucrata HOM05D000104 ORTHO05D006391 1.6e-57 226.5 134 83.6
Migut.G00313 Erythranthe guttata HOM05D000104 ORTHO05D006391 8.0e-57 224.2 135 83.0
CAN.G69.9 Capsicum annuum HOM05D000104 ORTHO05D006391 1.4e-56 223.4 132 84.8
GSVIVG01017921001 Vitis vinifera HOM05D000104 ORTHO05D006391 1.4e-56 223.4 134 81.3
Cfa015609 Carpinus fangiana HOM05D000104 ORTHO05D006391 3.0e-56 222.2 134 79.9
Haze_00933 Corylus avellana HOM05D000104 ORTHO05D006391 3.0e-56 222.2 134 79.9
Cc03_g03400 Coffea canephora HOM05D000104 ORTHO05D006391 6.8e-56 221.1 132 82.6
Manes.15G026000 Manihot esculenta HOM05D000104 ORTHO05D006391 6.8e-56 221.1 134 81.3
CiPaw.02G094700 Carya illinoinensis HOM05D000104 ORTHO05D006391 1.2e-55 220.3 134 77.6
Lalb_Chr02g0144671 Lupinus albus HOM05D000104 ORTHO05D006391 5.7e-55 218.0 134 77.6
CANSAT78G1321 Cannabis sativa HOM05D000104 ORTHO05D006391 7.5e-55 217.6 133 78.9
QL06p003521 Quercus lobata HOM05D000104 ORTHO05D006391 7.5e-55 217.6 133 78.2
CiPaw.01G162800 Carya illinoinensis HOM05D000104 ORTHO05D006391 1.3e-54 216.9 134 77.6
Dinv38416 Davidia involucrata HOM05D000104 ORTHO05D006391 1.7e-54 216.5 134 80.6
Atru.chr4.2520 Acer truncatum HOM05D000104 ORTHO05D006391 2.2e-54 216.1 134 77.6
Ciclev10004335m.g Citrus clementina HOM05D000104 ORTHO05D006391 4.8e-54 214.9 134 77.6
Potri.010G091200 Populus trichocarpa HOM05D000104 ORTHO05D006391 4.8e-54 214.9 134 79.1
THA.LOC104818783 Tarenaya hassleriana HOM05D000104 ORTHO05D006391 4.8e-54 214.9 135 77.0
EL10As3g23347 Beta vulgaris HOM05D000104 ORTHO05D006391 6.3e-54 214.5 133 80.5
Manes.03G181600 Manihot esculenta HOM05D000104 ORTHO05D006391 6.3e-54 214.5 134 78.4
Potri.008G149900 Populus trichocarpa HOM05D000104 ORTHO05D006391 8.3e-54 214.2 134 79.9
TWI73G0072 Tripterygium wilfordii HOM05D000104 ORTHO05D006391 1.4e-53 213.4 134 77.6
Hund12165 Selenicereus undatus HOM05D000104 ORTHO05D006391 1.8e-53 213.0 133 78.9
Ca_10932_v3 Cicer arietinum L. HOM05D000104 ORTHO05D006391 5.4e-53 211.5 134 75.4
Glyma.10G250500 Glycine max HOM05D000104 ORTHO05D006391 5.4e-53 211.5 134 76.1
MD16G1187800 Malus domestica HOM05D000104 ORTHO05D006391 5.4e-53 211.5 133 78.2
DCAR_027168 Daucus carota HOM05D000104 ORTHO05D019545 7.0e-53 211.1 136 73.5
Lsat_1_v5_gn_7_66780 Lactuca sativa HOM05D000104 ORTHO05D006391 7.0e-53 211.1 136 77.9
AUR62038161 Chenopodium quinoa HOM05D000104 ORTHO05D006391 1.6e-52 209.9 133 78.9
Lj3A741T68 Lonicera japonica HOM05D000104 ORTHO05D006391 1.6e-52 209.9 133 78.2
Medtr1g105050 Medicago truncatula HOM05D000104 ORTHO05D006391 1.6e-52 209.9 134 73.9
HanXRQChr09g0247251 Helianthus annuus HOM05D000104 ORTHO05D006391 2.0e-52 209.5 134 76.9
MD13G1186900 Malus domestica HOM05D000104 ORTHO05D006391 2.0e-52 209.5 133 77.4
TAR636G2934 Trochodendron aralioides HOM05D000104 ORTHO05D006391 2.0e-52 209.5 132 77.3
VMungo0720G1811 Vigna mungo HOM05D000104 ORTHO05D006391 2.7e-52 209.1 134 74.6
Ah.04g154480 Amaranthus hybridus HOM05D000104 ORTHO05D006391 3.5e-52 208.8 133 77.4
Glyma.20G143200 Glycine max HOM05D000104 ORTHO05D006391 3.5e-52 208.8 134 74.6
Phvul.007G054000 Phaseolus vulgaris HOM05D000104 ORTHO05D006391 3.5e-52 208.8 134 74.6
Psat6g209840 Pisum sativum HOM05D000104 ORTHO05D006391 4.5e-52 208.4 134 73.1
arahy.Tifrunner.gnm1.ann1.CDG6HX Arachis hypogaea HOM05D000104 ORTHO05D006391 5.9e-52 208.0 135 72.6
Sed0009592 Sechium edule HOM05D000104 ORTHO05D006391 5.9e-52 208.0 134 75.4
SalBow2G2646 Salvia bowleyana HOM05D000104 ORTHO05D006391 7.7e-52 207.6 127 81.1
ClCG06G005980 Citrullus lanatus HOM05D000104 ORTHO05D006391 1.0e-51 207.2 134 74.6
Nn1g02228 Nelumbo nucifera HOM05D000104 ORTHO05D006391 1.0e-51 207.2 135 76.3
TPR.G5483 Trifolium pratense HOM05D000104 ORTHO05D006391 1.0e-51 207.2 134 74.6
arahy.Tifrunner.gnm1.ann1.6R1BCK Arachis hypogaea HOM05D000104 ORTHO05D006391 1.3e-51 206.8 135 71.9
Eucgr.B01100 Eucalyptus grandis HOM05D000104 ORTHO05D006391 1.7e-51 206.5 134 75.4
Rhsim02G0022300 Rhododendron simsii HOM05D000104 ORTHO05D006391 1.7e-51 206.5 157 66.2
DCAR_002397 Daucus carota HOM05D000104 ORTHO05D006391 2.2e-51 206.1 134 74.6
vmacro15323 Vaccinium macrocarpon HOM05D000104 ORTHO05D006391 2.9e-51 205.7 132 75.8
Sc19g0004350 Simmondsia chinensis HOM05D000104 ORTHO05D006391 3.8e-51 205.3 133 75.2
AUR62038085 Chenopodium quinoa HOM05D000104 ORTHO05D006391 5.0e-51 204.9 133 76.7
Lj5g0020197 Lotus japonicus HOM05D000104 ORTHO05D006391 5.0e-51 204.9 134 73.1
PGR142G0455 Punica granatum HOM05D000104 ORTHO05D006391 6.5e-51 204.5 135 74.8
Glyma.11G004100 Glycine max HOM05D000104 ORTHO05D006391 8.5e-51 204.1 135 71.9
Sp3g04950 Schrenkiella parvula HOM05D000104 ORTHO05D006391 8.5e-51 204.1 134 73.9
Lj1g0024868 Lotus japonicus HOM05D000104 ORTHO05D006391 1.1e-50 203.8 134 71.6
Carub.0003s0543 Capsella rubella HOM05D000104 ORTHO05D006391 1.5e-50 203.4 134 73.1
Nn4g26250 Nelumbo nucifera HOM05D000104 ORTHO05D006391 1.9e-50 203.0 136 74.3
CARHR080510 Cardamine hirsuta HOM05D000104 ORTHO05D006391 3.2e-50 202.2 134 72.4
CsaV3_6G038290 Cucumis sativus L. HOM05D000104 ORTHO05D006391 4.2e-50 201.8 134 72.4
AL3G16830 Arabidopsis lyrata HOM05D000104 ORTHO05D006391 7.2e-50 201.1 134 72.4
Prupe.1G154600 Prunus persica HOM05D000104 ORTHO05D006391 9.4e-50 200.7 133 73.7
MELO3C014493.2 Cucumis melo HOM05D000104 ORTHO05D006391 1.2e-49 200.3 134 71.6
AT3G06010 Arabidopsis thaliana HOM05D000104 ORTHO05D006391 1.6e-49 199.9 134 71.6
Aa31LG5G16490 Aethionema arabicum HOM05D000104 ORTHO05D006391 2.1e-49 199.5 134 72.4
BcaC09g47872 Brassica carinata HOM05D000104 ORTHO05D006391 2.1e-49 199.5 134 71.6
BolC1t05642H Brassica oleracea HOM05D000104 ORTHO05D006391 2.1e-49 199.5 134 71.6
unitig_749.g14068 Utricularia gibba HOM05D000104 ORTHO05D006391 3.6e-49 198.7 134 73.9
RcHm_v2.0_Chr4g0417121 Rosa chinensis HOM05D000104 ORTHO05D006391 4.7e-49 198.4 134 71.6
FAN22G2243 Fragaria x ananassa HOM05D000104 ORTHO05D006391 1.4e-48 196.8 134 71.6
Thhalv10019947m.g Eutrema salsugineum HOM05D000104 ORTHO05D006391 1.8e-48 196.4 134 71.6
Aqoxy2G03333 Aquilegia oxysepala HOM05D000104 ORTHO05D006391 2.3e-48 196.1 136 75.0
BraA01t04455Z Brassica rapa HOM05D000104 ORTHO05D006391 2.3e-48 196.1 134 71.6
Rhsim04G0204200 Rhododendron simsii HOM05D000104 ORTHO05D006391 2.3e-48 196.1 162 64.2
FAN07G1560 Fragaria x ananassa HOM05D000104 ORTHO05D006391 3.0e-48 195.7 134 71.6
FvH4_4g14970 Fragaria vesca HOM05D000104 ORTHO05D006391 4.0e-48 195.3 134 70.9
FAN12G2172 Fragaria x ananassa HOM05D006587 ORTHO05D006391 4.0e-48 195.3 134 70.9
FAN17G1856 Fragaria x ananassa HOM05D000104 ORTHO05D006391 4.0e-48 195.3 134 70.9
Aqoxy1G03114 Aquilegia oxysepala HOM05D000104 ORTHO05D006391 5.2e-48 194.9 136 71.3
Carub.0006s1764 Capsella rubella HOM05D000104 ORTHO05D006391 5.2e-48 194.9 135 70.4
AT5G19310 Arabidopsis thaliana HOM05D000104 ORTHO05D006391 6.8e-48 194.5 135 68.1
PSO170G0309 Papaver somniferum HOM05D000104 ORTHO05D006391 6.8e-48 194.5 135 73.3
arahy.Tifrunner.gnm1.ann1.JYJ007 Arachis hypogaea HOM05D000104 ORTHO05D006391 1.2e-47 193.7 136 69.1
Medtr5g005840 Medicago truncatula HOM05D000104 ORTHO05D006391 1.2e-47 193.7 135 69.6
arahy.Tifrunner.gnm1.ann1.I4QQIE Arachis hypogaea HOM05D000104 ORTHO05D006391 1.5e-47 193.4 136 68.4
Thhalv10015665m.g Eutrema salsugineum HOM05D000104 ORTHO05D006391 1.5e-47 193.4 135 68.1
Sp6g25110 Schrenkiella parvula HOM05D000104 ORTHO05D006391 1.5e-47 193.4 135 69.6
AL6G30790 Arabidopsis lyrata HOM05D000104 ORTHO05D006391 2.0e-47 193.0 135 68.1
TPR.G37980 Trifolium pratense HOM05D000104 ORTHO05D006391 2.0e-47 193.0 135 69.6
HPP92_009639 Vanilla planifolia HOM05D000104 ORTHO05D006391 2.6e-47 192.6 137 67.9
PSO302G0005 Papaver somniferum HOM05D000104 ORTHO05D006391 9.8e-47 190.7 135 72.6
Psat4g211240 Pisum sativum HOM05D000104 ORTHO05D006391 9.8e-47 190.7 136 68.4
Lj6C597G4 Lonicera japonica HOM05D000104 ORTHO05D006391 1.7e-46 189.9 130 73.8
Thecc.04G226600 Theobroma cacao HOM05D000104 ORTHO05D006391 2.8e-46 189.1 134 69.4
Sabra08G0114000 Salix brachista HOM05D000104 ORTHO05D006391 4.9e-46 188.3 177 59.3
Gohir.D10G148800 Gossypium hirsutum HOM05D000104 ORTHO05D006391 8.3e-46 187.6 134 68.7
Gorai.011G166100 Gossypium raimondii HOM05D000104 ORTHO05D006391 8.3e-46 187.6 134 68.7
ATR0626G379 Amborella trichopoda HOM05D000104 ORTHO05D006391 1.4e-45 186.8 136 70.6
HanXRQChr09g0247211 Helianthus annuus HOM05D000104 ORTHO05D006391 1.4e-45 186.8 134 72.4
Gohir.A10G118000 Gossypium hirsutum HOM05D000104 ORTHO05D006391 2.4e-45 186.0 134 67.9
Os05g0144300 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D006391 4.1e-45 185.3 136 65.4
COL.COLO4_06204 Corchorus olitorius HOM05D000104 ORTHO05D006391 1.2e-44 183.7 134 67.2
Peaxi162Scf00437g00634 Petunia axillaris HOM05D000104 ORTHO05D006391 1.6e-44 183.3 112 83.0
CARHR193660 Cardamine hirsuta HOM05D000104 ORTHO05D006391 3.5e-44 182.2 134 67.2
CDE04G0057 Ceratophyllum demersum HOM05D000104 ORTHO05D006391 3.5e-44 182.2 136 68.4
Duzib212G0338 Durio zibethinus HOM05D000104 ORTHO05D006391 1.3e-43 180.3 134 65.7
SEGI_40932 Sequoiadendron giganteum HOM05D000104 ORTHO05D006391 3.8e-43 178.7 136 66.9
Zm00001eb417900 Zea mays HOM05D000104 ORTHO05D006391 1.6e-41 173.3 137 61.3
Actinidia23493 Actinidia chinensis HOM05D000104 ORTHO05D006391 2.1e-41 172.9 101 83.2
Zm00001eb108690 Zea mays HOM05D000104 ORTHO05D006391 1.8e-40 169.9 136 59.6
PSO566G0247 Papaver somniferum HOM05D000104 ORTHO05D006391 6.4e-38 161.4 135 63.7
Nitab4.5_0000144g0090 Nicotiana tabacum HOM05D000104 ORTHO05D006391 1.0e-35 154.1 163 54.6
CSS0044999 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 6.6e-35 151.4 155 55.5
Nitab4.5_0000180g0040 Nicotiana tabacum HOM05D000104 ORTHO05D006391 1.2e-33 147.1 173 52.0
CSS0022730 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 4.7e-33 145.2 155 52.9
TAR636G3341 Trochodendron aralioides HOM05D002543 ORTHO05D025749 6.4e-30 134.8 87 73.6
SHI00411 Sapria himalayana HOM05D000104 ORTHO05D006391 1.7e-27 126.7 303 30.7
ECA234G3449 Erigeron canadensis HOM05D000104 ORTHO05D006391 5.6e-26 121.7 142 49.3
Mapoly0030s0101 Marchantia polymorpha HOM05D000104 ORTHO05D006391 4.7e-25 118.6 143 46.9
Ca_24384_v3 Cicer arietinum L. HOM05D000104 ORTHO05D006391 1.3e-22 110.5 80 67.5
PGR142G2257 Punica granatum HOM05D000104 ORTHO05D006391 1.7e-22 110.2 80 72.5
Pp3c27_3890 Physcomitrium patens HOM05D000104 ORTHO05D006391 6.4e-22 108.2 140 46.4
AagrBONN_evm.TU.Sc2ySwM_117.613 Anthoceros agrestis HOM05D000104 ORTHO05D006391 5.1e-19 98.6 138 43.5
SMO141G0237 Selaginella moellendorffii HOM05D000104 ORTHO05D006391 1.2e-17 94.0 132 43.2
Lsat_1_v5_gn_7_108600 Lactuca sativa HOM05D000104 ORTHO05D036450 3.2e-13 79.3 51 80.4
Duzib151G0379 Durio zibethinus HOM05D000104 ORTHO05D006391 5.4e-13 78.6 134 38.1
CBR_g29561 Chara braunii HOM05D000104 ORTHO05D006391 1.2e-12 77.4 146 39.0
Lsat_1_v5_gn_5_115140 Lactuca sativa HOM05D000104 ORTHO05D025749 6.0e-12 75.1 51 76.5
Lsat_1_v5_gn_4_169420 Lactuca sativa HOM05D000104 ORTHO05D036450 3.0e-11 72.8 51 74.5


User provided reference genes

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