Gene: CSS0022730

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0022730
  • Transcript Identifier CSS0022730.1
  • Gene Type Coding gene
  • Location Chr5 : 179929746-179977231 : negative

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0022730.1

Descriptions

  • Description PREDICTED: probable ATP-dependent DNA helicase CHR12 [Vitis vinifera]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010492
ISO
PLAZA Integrative Orthologymaintenance of shoot apical meristem identity AT5G19310
GO:0010231
ISO
PLAZA Integrative Orthologymaintenance of seed dormancy AT5G19310
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT5G19310
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT3G06010
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G06010
GO:0010078
ISO
PLAZA Integrative Orthologymaintenance of root meristem identity AT5G19310
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G06010

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0016791
IEA
InterProphosphatase activity
GO:0042393
IEA
InterProhistone binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0031490
ISO
PLAZA Integrative Orthologychromatin DNA binding AT5G19310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os05g0144300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000253 Forkhead-associated (FHA) domain
IPR001932 PPM-type phosphatase domain
IPR001650 Helicase, C-terminal
IPR029028 Alpha/beta knot methyltransferases
IPR036457 PPM-type phosphatase domain superfamily
IPR038718 SNF2-like, N-terminal domain superfamily
IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR012340 Nucleic acid-binding, OB-fold
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR008984 SMAD/FHA domain superfamily
IPR029295 Snf2, ATP coupling domain
IPR000330 SNF2, N-terminal
IPR003750 Putative RNA methyltransferase
Mapman id Description
12.4.1.1.1 Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.ATPase component SYD/BRM/MINU