Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012828.1 Olea europaea HOM05D000216 ORTHO05D001131 2.2e-38 161.8 78 100.0
Nn020s41502 Nelumbo nucifera HOM05D000216 ORTHO05D001131 5.5e-34 147.1 77 90.9
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 5.5e-34 147.1 77 90.9
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.2e-33 146.0 77 89.6
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.2e-33 146.0 77 89.6
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.2e-33 146.0 77 89.6
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 1.6e-33 145.6 77 89.6
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 2.1e-33 145.2 77 89.6
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 2.1e-33 145.2 77 89.6
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 2.1e-33 145.2 77 89.6
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 3.6e-33 144.4 78 88.5
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 3.6e-33 144.4 77 88.3
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 3.6e-33 144.4 77 89.6
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 3.6e-33 144.4 77 88.3
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 3.6e-33 144.4 77 88.3
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 4.7e-33 144.1 77 88.3
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 6.1e-33 143.7 75 92.0
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.4e-32 142.5 77 87.0
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 1.4e-32 142.5 77 87.0
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 1.8e-32 142.1 77 85.7
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 1.8e-32 142.1 77 85.7
Sc13g0006970 Simmondsia chinensis HOM05D000216 ORTHO05D001131 1.8e-32 142.1 77 87.0
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 1.8e-32 142.1 77 87.0
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 1.8e-32 142.1 77 87.0
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.0e-32 141.0 77 85.7
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 5.2e-32 140.6 77 85.7
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 6.8e-32 140.2 77 84.4
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 8.8e-32 139.8 77 84.4
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 8.8e-32 139.8 77 84.4
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 8.8e-32 139.8 77 84.4
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 8.8e-32 139.8 77 84.4
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 8.8e-32 139.8 77 84.4
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 2.6e-31 138.3 77 85.7
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 3.4e-31 137.9 77 83.1
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 3.4e-31 137.9 77 83.1
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 3.4e-31 137.9 77 83.1
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 3.4e-31 137.9 77 83.1
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 3.4e-31 137.9 77 84.4
Lj2A1238G119 Lonicera japonica HOM05D000216 ORTHO05D001131 4.4e-31 137.5 77 85.7
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 4.4e-31 137.5 77 85.7
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 4.4e-31 137.5 77 84.4
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 7.5e-31 136.7 77 85.7
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.3e-30 136.0 77 87.0
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 1.3e-30 136.0 77 85.7
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 3.7e-30 134.4 77 85.7
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 4.8e-30 134.0 77 81.8
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 6.3e-30 133.7 77 81.8
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.4e-29 132.5 77 81.8
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 1.4e-29 132.5 77 81.8
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 1.4e-29 132.5 77 81.8
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 3.5e-28 127.9 77 81.8
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.5e-28 127.5 77 80.5
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 1.0e-27 126.3 77 80.5
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 1.0e-27 126.3 77 80.5
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.2e-27 125.2 77 79.2
Thecc.07G188500 Theobroma cacao HOM05D000216 ORTHO05D001131 1.5e-26 122.5 66 86.4
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.9e-22 107.5 58 84.5
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.9e-22 107.5 58 84.5
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 6.3e-22 107.1 59 84.7
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 3.5e-20 101.3 69 72.5
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 1.7e-19 99.0 50 92.0
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.3e-19 98.6 72 68.1
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.5e-18 95.9 75 65.3
TPR.G4503 Trifolium pratense HOM05D000216 ORTHO05D001131 4.2e-18 94.4 56 75.0
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 1.2e-17 92.8 53 79.2
ClCG10G008040 Citrullus lanatus HOM05D000216 ORTHO05D013308 1.6e-17 92.4 49 87.8
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.8e-16 89.0 77 61.0
Solyc12g035940.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 2.0e-15 85.5 52 80.8
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 3.4e-15 84.7 77 59.7
TPR.G32479 Trifolium pratense HOM05D000216 ORTHO05D001131 1.7e-14 82.4 53 67.9
Nitab4.5_0007104g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 8.3e-14 80.1 39 94.9
HanXRQChr05g0139701 Helianthus annuus HOM05D000216 ORTHO05D001131 7.8e-12 73.6 45 77.8
Nitab4.5_0000095g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.3e-11 72.8 42 81.0
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.7e-11 72.4 51 72.5
EL10Ac1g01787 Beta vulgaris HOM05D000216 ORTHO05D001131 1.0e-08 63.2 34 85.3
Gohir.D12G077902 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.4e-08 62.8 72 51.4
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.8e-08 62.4 34 85.3
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 5.2e-08 60.8 30 93.3
Solyc04g026310.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.5e-07 59.3 40 65.0
EL10Ac1g01786 Beta vulgaris HOM05D000216 ORTHO05D001131 2.0e-07 58.9 34 79.4
ClCG05G015590 Citrullus lanatus HOM05D000216 ORTHO05D013308 2.0e-07 58.9 37 73.0
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 4.4e-07 57.8 40 65.0
SGA_v2.0_scaffold13G06598 Striga asiatica HOM05D000580 ORTHO05D022401 4.9e-06 54.3 26 96.2
arahy.Tifrunner.gnm1.ann1.V1C6S4 Arachis hypogaea HOM05D000216 ORTHO05D001131 8.3e-06 53.5 50 54.0


User provided reference genes

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