Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012826.1 Olea europaea HOM05D000216 ORTHO05D000634 4.3e-46 187.6 91 100.0
Oeu012803.1 Olea europaea HOM05D000216 ORTHO05D000634 4.0e-36 154.5 90 82.2
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 3.2e-33 144.8 89 79.8
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.2e-33 144.4 89 79.8
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.2e-33 144.4 89 79.8
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.2e-33 144.4 89 79.8
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.2e-33 144.4 89 79.8
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.2e-33 144.4 89 79.8
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 9.3e-33 143.3 89 79.8
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 4.6e-32 141.0 89 78.7
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 6.0e-32 140.6 89 78.7
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 3.3e-30 134.8 89 74.2
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 3.3e-30 134.8 89 74.2
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.2e-29 130.2 89 74.2
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.4e-28 129.4 86 73.3
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.4e-28 128.6 89 73.0
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.5e-27 125.9 86 75.6
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 2.6e-27 125.2 88 69.3
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.6e-27 125.2 88 69.3
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.6e-27 125.2 88 69.3
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.6e-27 125.2 88 69.3
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.6e-27 125.2 89 69.7
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 3.4e-27 124.8 89 70.8
HanXRQChr03g0073121 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-26 122.9 88 68.2
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-26 122.9 88 68.2
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.9e-26 121.7 90 70.0
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 6.5e-26 120.6 80 72.5
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 6.5e-26 120.6 89 66.3
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 6.5e-26 120.6 88 67.0
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.9e-25 119.0 88 67.0
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 2.5e-25 118.6 88 65.9
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 3.2e-25 118.2 85 67.1
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 3.2e-25 118.2 85 67.1
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 3.2e-25 118.2 66 83.3
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 7.1e-25 117.1 86 67.4
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.1e-24 115.5 80 68.8
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 6.0e-24 114.0 86 66.3
Gohir.A13G086345 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.3e-23 112.1 86 66.3
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 8.7e-23 110.2 87 63.2
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 8.7e-23 110.2 87 63.2
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 8.7e-23 110.2 87 63.2
BraSC143t45682Z Brassica rapa HOM05D000216 ORTHO05D000634 8.7e-23 110.2 87 63.2
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 8.7e-23 110.2 87 63.2
BraSC58t46406Z Brassica rapa HOM05D000216 ORTHO05D000634 8.7e-23 110.2 87 63.2
BraSC151t45703Z Brassica rapa HOM05D000216 ORTHO05D000634 1.5e-22 109.4 86 64.0
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 3.3e-22 108.2 87 62.1
Gohir.D13G070450 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.3e-22 108.2 87 60.9
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 4.3e-22 107.8 78 69.2
Oeu062867.1 Olea europaea HOM05D000216 ORTHO05D000634 1.6e-21 105.9 59 83.1
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 2.2e-21 105.5 87 62.1
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 3.7e-21 104.8 81 65.4
C02p44110 Brassica napus HOM05D000216 ORTHO05D000634 3.7e-21 104.8 87 60.9
Potri.003G067332 Populus trichocarpa HOM05D000216 ORTHO05D000634 8.2e-21 103.6 62 77.4
Gohir.A13G053484 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.4e-20 102.8 86 59.3
CAN.G844.3 Capsicum annuum HOM05D000216 ORTHO05D000634 2.4e-20 102.1 60 80.0
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 3.1e-20 101.7 88 58.0
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 3.1e-20 101.7 88 58.0
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 1.5e-19 99.4 88 56.8
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-19 99.0 88 62.5
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 2.6e-19 98.6 85 60.0
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 3.4e-19 98.2 89 58.4
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 3.4e-19 98.2 88 56.8
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 3.4e-19 98.2 88 56.8
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.5e-19 97.8 81 63.0
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.5e-19 97.8 81 63.0
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-18 95.1 88 60.2
Oeu045561.1 Olea europaea HOM05D000216 ORTHO05D000634 5.0e-18 94.4 66 72.7
Lalb_Chr22g0361661 Lupinus albus HOM05D000216 ORTHO05D000634 6.5e-18 94.0 87 55.2
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 1.1e-17 93.2 87 55.2
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 3.6e-16 88.2 92 53.3
Hund12596 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.1e-16 87.4 73 58.9
Gohir.D13G143950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.9e-16 87.0 52 75.0
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 1.9e-14 82.4 74 54.1
Nitab4.5_0000502g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.7e-14 80.9 65 63.1
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 7.4e-14 80.5 98 45.9
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.7e-13 79.3 40 85.0
Solyc10g047410.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 1.1e-12 76.6 38 86.8
Solyc03g095380.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.4e-12 75.5 86 48.8
EL10Ac5g11996 Beta vulgaris HOM05D000216 ORTHO05D000634 7.7e-11 70.5 44 72.7
arahy.Tifrunner.gnm1.ann1.ZI741N Arachis hypogaea HOM05D000216 ORTHO05D000634 1.3e-10 69.7 92 44.6
Lalb_Chr13g0292891 Lupinus albus HOM05D000216 ORTHO05D000634 2.2e-10 68.9 62 51.6
Solyc08g028940.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-09 66.6 30 90.0
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 1.4e-09 66.2 32 87.5
arahy.Tifrunner.gnm1.ann1.ZJYB0J Arachis hypogaea HOM05D000216 ORTHO05D000473 2.7e-08 62.0 32 78.1
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 6.1e-08 60.8 32 81.2
Nitab4.5_0004184g0050 Nicotiana tabacum HOM05D000216 ORTHO05D014572 6.1e-08 60.8 81 49.4
Hund10655 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.4e-07 59.7 95 45.3
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 5.1e-07 57.8 32 75.0
Solyc01g017510.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-06 55.8 63 50.8
Nitab4.5_0003361g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.7e-06 54.3 45 62.2


User provided reference genes

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