Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000760.1 Olea europaea HOM05D000104 ORTHO05D003467 6.4e-105 384.0 187 100.0
Migut.A00006 Erythranthe guttata HOM05D000104 ORTHO05D003467 4.9e-44 181.8 195 53.8
QL02p019684 Quercus lobata HOM05D000104 ORTHO05D003467 1.1e-43 180.6 169 57.4
Oeu012636.1 Olea europaea HOM05D000104 ORTHO05D003467 9.1e-43 177.6 168 58.9
Gohir.A07G031300 Gossypium hirsutum HOM05D000104 ORTHO05D003467 1.2e-42 177.2 169 55.0
Gorai.001G036900 Gossypium raimondii HOM05D000104 ORTHO05D003467 1.2e-42 177.2 169 54.4
GSVIVG01035901001 Vitis vinifera HOM05D000104 ORTHO05D003467 3.5e-42 175.6 168 56.5
Haze_21436 Corylus avellana HOM05D000104 ORTHO05D003467 4.5e-42 175.3 169 56.2
Duzib150G0247 Durio zibethinus HOM05D000104 ORTHO05D003467 5.9e-42 174.9 169 54.4
MSTRG.11592 Avicennia marina HOM05D000104 ORTHO05D003467 1.0e-41 174.1 214 51.9
COL.COLO4_18936 Corchorus olitorius HOM05D000104 ORTHO05D003467 1.0e-41 174.1 169 54.4
Gohir.D07G035100 Gossypium hirsutum HOM05D000104 ORTHO05D003467 1.3e-41 173.7 169 53.8
Ciclev10010331m.g Citrus clementina HOM05D000104 ORTHO05D003467 2.3e-41 172.9 169 56.2
TAR625G0155 Trochodendron aralioides HOM05D000104 ORTHO05D003467 2.3e-41 172.9 168 56.0
Manes.03G010400 Manihot esculenta HOM05D000104 ORTHO05D003467 3.8e-41 172.2 170 57.1
TPR.G3131 Trifolium pratense HOM05D000104 ORTHO05D003467 1.9e-40 169.9 170 55.3
Dinv16472 Davidia involucrata HOM05D000104 ORTHO05D003467 2.5e-40 169.5 175 55.4
Thecc.09G017400 Theobroma cacao HOM05D000104 ORTHO05D003467 5.6e-40 168.3 169 52.7
Ca_15766_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 7.2e-40 167.9 169 54.4
Hma1.2p1_0392F.1_g143010 Hydrangea macrophylla HOM05D000104 ORTHO05D003467 2.1e-39 166.4 168 52.4
Actinidia16922 Actinidia chinensis HOM05D000104 ORTHO05D003467 3.6e-39 165.6 183 51.4
Gohir.A13G179800 Gossypium hirsutum HOM05D000104 ORTHO05D003467 3.6e-39 165.6 169 52.1
Gorai.010G244100 Gossypium raimondii HOM05D000104 ORTHO05D003467 3.6e-39 165.6 169 52.1
Glyma.04G062400 Glycine max HOM05D000104 ORTHO05D003467 4.7e-39 165.2 170 55.3
Psat5g031880 Pisum sativum HOM05D000104 ORTHO05D003467 4.7e-39 165.2 170 54.1
Sed0013682 Sechium edule HOM05D000104 ORTHO05D003467 6.1e-39 164.9 172 54.7
CSS0003293 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 8.0e-39 164.5 168 54.8
Lj1g0020904 Lotus japonicus HOM05D000104 ORTHO05D003467 8.0e-39 164.5 170 54.7
Glyma.06G063400 Glycine max HOM05D000104 ORTHO05D003467 1.0e-38 164.1 170 54.7
ECA248G2891 Erigeron canadensis HOM05D000104 ORTHO05D003467 1.4e-38 163.7 168 56.5
Medtr3g106210 Medicago truncatula HOM05D000104 ORTHO05D003467 1.4e-38 163.7 170 54.7
Cc08_g00060 Coffea canephora HOM05D000104 ORTHO05D003467 2.3e-38 162.9 196 48.0
MELO3C016973.2 Cucumis melo HOM05D000104 ORTHO05D003467 3.0e-38 162.5 175 54.3
Potri.018G021100 Populus trichocarpa HOM05D000104 ORTHO05D003467 6.8e-38 161.4 172 53.5
VMungo1309G2115 Vigna mungo HOM05D000104 ORTHO05D003467 6.8e-38 161.4 167 54.5
CsaV3_4G036700 Cucumis sativus L. HOM05D000104 ORTHO05D003467 1.5e-37 160.2 175 53.7
Actinidia22434 Actinidia chinensis HOM05D002462 ORTHO05D002893 2.6e-37 159.5 175 52.6
Manes.16G127700 Manihot esculenta HOM05D000104 ORTHO05D003467 2.6e-37 159.5 176 52.8
Sed0022321 Sechium edule HOM05D000104 ORTHO05D003467 2.6e-37 159.5 173 54.3
Nn2g12306 Nelumbo nucifera HOM05D000104 ORTHO05D003467 3.4e-37 159.1 174 53.4
Rhsim02G0208200 Rhododendron simsii HOM05D000104 ORTHO05D003467 4.4e-37 158.7 168 53.0
Lsat_1_v5_gn_1_42900 Lactuca sativa HOM05D000104 ORTHO05D003467 5.7e-37 158.3 168 54.2
Potri.006G262200 Populus trichocarpa HOM05D000104 ORTHO05D003467 9.8e-37 157.5 172 52.9
Phvul.009G088700 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 2.2e-36 156.4 167 52.7
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 2.2e-36 156.4 168 53.6
arahy.Tifrunner.gnm1.ann1.QU94QB Arachis hypogaea HOM05D000104 ORTHO05D003467 2.9e-36 156.0 169 49.7
ClCG05G016460 Citrullus lanatus HOM05D000104 ORTHO05D003467 2.9e-36 156.0 171 52.0
Eucgr.G00556 Eucalyptus grandis HOM05D000104 ORTHO05D003467 2.9e-36 156.0 169 48.5
Sabra06G0204500 Salix brachista HOM05D000104 ORTHO05D003467 3.7e-36 155.6 172 50.6
Actinidia13200 Actinidia chinensis HOM05D000104 ORTHO05D003467 3.2e-35 152.5 136 59.6
Lj7A730T43 Lonicera japonica HOM05D000104 ORTHO05D003467 5.4e-35 151.8 190 52.6
Lalb_Chr23g0268291 Lupinus albus HOM05D000104 ORTHO05D003467 7.0e-35 151.4 168 53.0
CSS0032982 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 2.0e-34 149.8 165 52.7
CiPaw.08G007100 Carya illinoinensis HOM05D000104 ORTHO05D003467 2.7e-34 149.4 183 49.2
Cpa.g.sc127.15 Carica papaya HOM05D000104 ORTHO05D003467 4.6e-34 148.7 169 50.9
Atru.chr7.2524 Acer truncatum HOM05D000104 ORTHO05D003467 5.9e-34 148.3 135 59.3
Lalb_Chr08g0244361 Lupinus albus HOM05D000104 ORTHO05D003467 7.8e-34 147.9 168 53.0
RcHm_v2.0_Chr6g0299661 Rosa chinensis HOM05D000104 ORTHO05D003467 7.8e-34 147.9 166 54.2
HanXRQChr01g0030671 Helianthus annuus HOM05D000104 ORTHO05D003467 1.0e-33 147.5 169 53.3
SGA_v2.0_scaffold20G09081 Striga asiatica HOM05D000104 ORTHO05D003467 6.6e-33 144.8 182 49.5
Prupe.1G391600 Prunus persica HOM05D000104 ORTHO05D003467 1.5e-32 143.7 164 50.0
Sabra18G0023400 Salix brachista HOM05D000104 ORTHO05D003467 1.5e-32 143.7 192 44.8
Peaxi162Scf00632g00012 Petunia axillaris HOM05D000104 ORTHO05D003467 7.3e-32 141.4 195 46.7
Solyc08g029130.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 7.3e-32 141.4 192 45.3
Oeu056768.1 Olea europaea HOM05D000104 ORTHO05D003467 2.8e-31 139.4 166 51.2
Rhsim07G0163100 Rhododendron simsii HOM05D000104 ORTHO05D003467 2.8e-31 139.4 168 47.6
Sopen08g010020 Solanum pennellii HOM05D000104 ORTHO05D003467 2.8e-31 139.4 192 42.7
PSO384G0886 Papaver somniferum HOM05D000104 ORTHO05D003467 3.6e-31 139.0 166 47.6
DCAR_003002 Daucus carota HOM05D000104 ORTHO05D003467 6.2e-31 138.3 188 46.3
FAN15G1888 Fragaria x ananassa HOM05D000104 ORTHO05D003467 1.4e-30 137.1 167 52.1
FAN27G0005 Fragaria x ananassa HOM05D000104 ORTHO05D003467 1.4e-30 137.1 167 52.1
PGR044G1954 Punica granatum HOM05D000104 ORTHO05D003467 1.4e-30 137.1 175 46.9
PSO339G0671 Papaver somniferum HOM05D000104 ORTHO05D003467 1.8e-30 136.7 167 47.3
HanXRQChr11g0353801 Helianthus annuus HOM05D000104 ORTHO05D003467 2.3e-30 136.3 168 48.2
Nitab4.5_0003811g0020 Nicotiana tabacum HOM05D000104 ORTHO05D003467 3.1e-30 136.0 196 42.9
FvH4_2g40920 Fragaria vesca HOM05D005818 ORTHO05D003467 6.8e-30 134.8 167 49.1
Nitab4.5_0002503g0110 Nicotiana tabacum HOM05D000104 ORTHO05D003467 6.8e-30 134.8 198 42.4
Solyc06g065730.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 1.5e-29 133.7 187 42.8
FAN20G2022 Fragaria x ananassa HOM05D000104 ORTHO05D003467 3.4e-29 132.5 166 48.8
Aqoxy2G02630 Aquilegia oxysepala HOM05D000104 ORTHO05D003467 4.4e-29 132.1 169 49.1
Sopen06g024260 Solanum pennellii HOM05D000104 ORTHO05D003467 4.4e-29 132.1 187 42.2
Lalb_Chr24g0402041 Lupinus albus HOM05D000104 ORTHO05D003467 9.8e-29 131.0 192 42.7
TWI63G1656 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 9.8e-29 131.0 165 46.7
vmacro05141 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 1.7e-28 130.2 176 43.8
EL10Ac2g04134 Beta vulgaris HOM05D000104 ORTHO05D003467 2.2e-28 129.8 168 47.6
CAN.G199.65 Capsicum annuum HOM05D000104 ORTHO05D003467 3.7e-28 129.0 190 42.1
Peaxi162Scf00430g00415 Petunia axillaris HOM05D000104 ORTHO05D003467 3.7e-28 129.0 158 50.0
TWI32G0850 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 3.7e-28 129.0 166 45.2
Ah.10g035570 Amaranthus hybridus HOM05D000104 ORTHO05D003467 1.4e-27 127.1 167 47.3
Nitab4.5_0002973g0030 Nicotiana tabacum HOM05D000104 ORTHO05D003467 5.4e-27 125.2 191 41.9
Hund03464 Selenicereus undatus HOM05D000104 ORTHO05D003467 5.4e-27 125.2 166 44.6
Ah.16g104930 Amaranthus hybridus HOM05D000104 ORTHO05D003467 2.7e-26 122.9 172 48.3
Aa31sc100G10 Aethionema arabicum HOM05D000104 ORTHO05D003467 7.8e-26 121.3 170 46.5
MD08G1058800 Malus domestica HOM05D000104 ORTHO05D003467 1.0e-25 120.9 164 40.9
Nitab4.5_0000486g0100 Nicotiana tabacum HOM05D000104 ORTHO05D003467 2.3e-25 119.8 195 41.0
Sc09g0010480 Simmondsia chinensis HOM05D000104 ORTHO05D003467 5.0e-25 118.6 166 44.6
Sp4g04150 Schrenkiella parvula HOM05D000104 ORTHO05D003467 6.6e-25 118.2 172 45.9
Thhalv10000014m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 1.1e-24 117.5 172 44.8
Hund19597 Selenicereus undatus HOM05D000104 ORTHO05D003467 1.5e-24 117.1 124 53.2
AUR62012463 Chenopodium quinoa HOM05D000104 ORTHO05D003467 1.9e-24 116.7 170 44.1
BcaB08g35151 Brassica carinata HOM05D000104 ORTHO05D003467 3.3e-24 115.9 172 44.8
CARHR116490 Cardamine hirsuta HOM05D000104 ORTHO05D003467 3.3e-24 115.9 166 44.0
MD15G1037700 Malus domestica HOM05D000104 ORTHO05D003467 3.3e-24 115.9 167 42.5
A09p55830 Brassica napus HOM05D000104 ORTHO05D003467 4.3e-24 115.5 172 44.8
C08p38830 Brassica napus HOM05D000104 ORTHO05D003467 4.3e-24 115.5 172 44.8
CDE06G2391 Ceratophyllum demersum HOM05D000104 ORTHO05D003467 4.3e-24 115.5 169 44.4
AUR62031587 Chenopodium quinoa HOM05D000104 ORTHO05D003467 5.6e-24 115.2 170 44.1
BcaC07g40886 Brassica carinata HOM05D000104 ORTHO05D003467 7.3e-24 114.8 172 45.9
BolC8t51453H Brassica oleracea HOM05D000104 ORTHO05D003467 7.3e-24 114.8 172 45.9
AT2G25170 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 9.5e-24 114.4 172 44.8
BraA09t40986Z Brassica rapa HOM05D000104 ORTHO05D003467 9.5e-24 114.4 172 44.8
Psat6g027200 Pisum sativum HOM05D000104 ORTHO05D003467 1.6e-23 113.6 168 42.9
AL4G16380 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 2.1e-23 113.2 174 44.3
Glyma.17G217300 Glycine max HOM05D000104 ORTHO05D003467 2.1e-23 113.2 182 42.9
Carub.0004s0475 Capsella rubella HOM05D000104 ORTHO05D003467 2.8e-23 112.8 170 45.9
RcHm_v2.0_Chr3g0455421 Rosa chinensis HOM05D000104 ORTHO05D003467 3.6e-23 112.5 167 46.1
Lalb_Chr22g0361401 Lupinus albus HOM05D000104 ORTHO05D003467 1.1e-22 110.9 169 40.8
DCAR_007677 Daucus carota HOM05D000104 ORTHO05D003467 1.4e-22 110.5 143 47.6
THA.LOC104803854 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 5.8e-21 105.1 167 41.3
vmacro05139 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 6.4e-20 101.7 126 45.2
ATR1153G016 Amborella trichopoda HOM05D000104 ORTHO05D003467 2.4e-19 99.8 184 37.0
Medtr1g013190 Medicago truncatula HOM05D000104 ORTHO05D003467 2.4e-19 99.8 168 39.3
THA.LOC104803635 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 1.2e-18 97.4 171 38.0
Phvul.001G046100 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 4.0e-14 82.4 184 34.2
TPR.G38889 Trifolium pratense HOM05D000104 ORTHO05D003467 5.8e-13 78.6 119 40.3
HPP92_004615 Vanilla planifolia HOM05D000104 ORTHO05D003467 2.9e-12 76.3 108 38.0
THA.LOC104804837 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 1.9e-11 73.6 130 40.8
Gohir.D13G187950 Gossypium hirsutum HOM05D000104 ORTHO05D017166 4.1e-11 72.4 73 52.1
SEGI_33990 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 5.4e-11 72.0 162 35.2
THA.LOC104804839 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 5.4e-11 72.0 130 40.0
VMungo0647G2573 Vigna mungo HOM05D000104 ORTHO05D003467 9.2e-11 71.2 132 36.4
Ca_13055_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 3.9e-09 65.9 108 43.5
Mapoly0010s0012 Marchantia polymorpha HOM05D000104 ORTHO05D003467 3.9e-09 65.9 135 38.5
TPR.G26726 Trifolium pratense HOM05D000104 ORTHO05D003467 1.1e-08 64.3 52 53.8
HPP92_004610 Vanilla planifolia HOM05D000104 ORTHO05D003467 3.3e-08 62.8 96 38.5
SMO200G0085 Selaginella moellendorffii HOM05D000104 ORTHO05D003467 4.3e-08 62.4 143 34.3
Os06g0183800 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D003467 2.1e-07 60.1 166 30.1
TPR.G25705 Trifolium pratense HOM05D002753 ORTHO05D003467 8.9e-06 54.7 30 70.0


User provided reference genes

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