Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 3.0e-248 861.3 414 100.0
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 4.8e-161 571.6 414 68.1
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 4.5e-151 538.5 414 62.8
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 1.5e-149 533.5 408 65.7
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 4.2e-149 531.9 411 64.2
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 2.7e-148 529.3 440 61.4
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 5.2e-147 525.0 411 64.0
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 1.5e-146 523.5 438 60.7
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 3.7e-145 518.8 407 63.6
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 8.3e-145 517.7 417 62.4
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 2.4e-144 516.2 413 61.3
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 2.0e-143 513.1 413 61.3
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 7.7e-143 511.1 416 60.3
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 1.7e-142 510.0 434 57.6
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 1.7e-142 510.0 406 62.8
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 3.8e-142 508.8 410 62.0
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 3.8e-142 508.8 406 62.8
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 5.0e-142 508.4 408 62.0
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 1.9e-141 506.5 408 61.8
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 7.2e-141 504.6 408 61.8
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 7.2e-141 504.6 407 60.2
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 9.4e-141 504.2 414 59.7
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 1.2e-140 503.8 409 60.9
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 2.3e-139 499.6 408 61.5
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 2.3e-139 499.6 412 61.9
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 2.3e-139 499.6 410 61.0
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 4.0e-139 498.8 414 60.9
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 4.4e-138 495.4 408 59.8
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 1.3e-137 493.8 411 60.3
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 2.2e-137 493.0 405 60.0
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 6.3e-137 491.5 409 60.4
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 8.3e-137 491.1 400 61.5
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 4.1e-136 488.8 409 60.1
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 4.1e-136 488.8 410 60.0
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.2e-135 487.3 408 60.3
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.0e-135 486.5 409 59.7
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 2.7e-135 486.1 408 59.1
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 5.9e-135 485.0 410 60.5
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 8.6e-134 481.1 410 59.5
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 2.5e-133 479.6 416 59.1
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 1.2e-132 477.2 412 57.5
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 1.5e-130 470.3 407 57.0
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 2.6e-130 469.5 413 57.1
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 2.2e-129 466.5 407 56.5
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 3.7e-129 465.7 416 56.2
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 4.9e-129 465.3 382 61.5
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 1.8e-128 463.4 384 59.1
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 7.0e-128 461.5 401 57.4
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 9.2e-128 461.1 412 55.1
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 2.7e-127 459.5 420 56.2
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 3.5e-127 459.1 405 56.0
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 4.6e-127 458.8 405 55.1
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 7.8e-127 458.0 411 54.7
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 1.7e-126 456.8 410 54.9
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 2.3e-126 456.4 404 57.2
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 9.5e-125 451.1 410 55.6
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 1.6e-124 450.3 415 54.5
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 2.8e-124 449.5 415 55.9
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 6.2e-124 448.4 415 53.0
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 5.2e-123 445.3 410 54.4
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 5.2e-123 445.3 410 54.1
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 1.2e-122 444.1 418 53.1
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 7.5e-122 441.4 447 51.9
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 4.9e-121 438.7 413 53.8
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 8.3e-121 438.0 413 54.2
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 2.4e-120 436.4 410 52.7
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 6.0e-119 431.8 404 52.2
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 3.0e-118 429.5 412 52.2
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 3.9e-118 429.1 417 54.9
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 5.0e-118 428.7 412 52.2
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 5.0e-118 428.7 391 54.5
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 1.9e-117 426.8 410 51.5
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 1.9e-117 426.8 413 52.1
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 1.9e-117 426.8 331 61.6
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 4.3e-117 425.6 410 51.0
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 5.6e-117 425.2 410 51.2
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 7.3e-117 424.9 410 51.2
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 9.5e-117 424.5 412 51.7
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 1.8e-115 420.2 410 51.2
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 2.3e-115 419.9 410 51.0
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 8.9e-115 417.9 415 52.8
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 5.8e-114 415.2 415 54.7
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 2.2e-113 413.3 413 51.1
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 6.4e-113 411.8 410 52.7
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 1.1e-112 411.0 393 55.2
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 4.1e-112 409.1 330 59.7
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 1.2e-111 407.5 412 50.2
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 1.0e-110 404.4 421 51.1
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.9e-109 400.2 409 52.8
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 2.0e-106 390.2 409 49.9
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 1.7e-105 387.1 405 51.9
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 5.4e-104 382.1 438 48.2
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 4.4e-98 362.5 423 48.9
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 2.2e-97 360.1 386 50.0
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 1.1e-96 357.8 492 41.9
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 9.3e-96 354.8 412 43.7
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 6.6e-94 348.6 395 47.3
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 8.7e-94 348.2 353 48.4
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 7.9e-79 298.5 416 40.9
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 1.6e-71 274.2 261 52.9
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 2.3e-70 270.4 188 68.1
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 5.7e-53 212.6 311 38.6
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 3.1e-51 206.8 179 57.5
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 3.8e-41 173.3 148 58.1
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 8.5e-41 172.2 149 58.4
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 3.2e-40 170.2 122 64.8
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 5.7e-37 159.5 428 28.3
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 8.0e-31 139.0 138 53.6
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 1.1e-27 128.6 128 50.8
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 2.5e-24 117.5 66 72.7
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 4.2e-24 116.7 445 24.9
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 5.5e-24 116.3 66 72.7
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 1.7e-20 104.8 65 75.4
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 1.2e-18 98.6 120 45.8
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 1.8e-14 84.7 89 47.2
COL.COLO4_27080 Corchorus olitorius HOM05D006688 ORTHO05D008550 9.2e-11 72.4 68 57.4
BcaB07g31609 Brassica carinata HOM05D006688 ORTHO05D008550 3.6e-07 60.5 114 35.1
VMungo0720G2087 Vigna mungo HOM05D000836 ORTHO05D000709 5.2e-06 56.6 121 31.4
Ciclev10004358m.g Citrus clementina HOM05D000836 ORTHO05D000709 6.8e-06 56.2 121 30.6


User provided reference genes

Program Settings