Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000221.1 Olea europaea HOM05D002513 ORTHO05D002720 1.8e-34 148.7 73 100.0
Oeu022895.1 Olea europaea HOM05D002513 ORTHO05D002720 5.4e-15 84.0 64 67.2
Oeu000209.1 Olea europaea HOM05D002513 ORTHO05D002720 1.2e-14 82.8 72 62.5
PGSC0003DMG402028242 Solanum tuberosum HOM05D002513 ORTHO05D002720 1.6e-14 82.4 66 62.1
Oeu002328.2 Olea europaea HOM05D002513 ORTHO05D002720 2.7e-14 81.6 64 65.6
Actinidia02147 Actinidia chinensis HOM05D002513 ORTHO05D002720 7.8e-14 80.1 64 64.1
Actinidia14412 Actinidia chinensis HOM05D002513 ORTHO05D002720 7.8e-14 80.1 64 64.1
Oeu000216.1 Olea europaea HOM05D002513 ORTHO05D002720 1.3e-13 79.3 72 61.1
CSS0008127 Camellia sinensis var. sinensis HOM05D002513 ORTHO05D002720 2.3e-13 78.6 66 62.1
SGA_v2.0_scaffold104G30173 Striga asiatica HOM05D002513 ORTHO05D002720 2.9e-13 78.2 64 64.1
MSTRG.12118 Avicennia marina HOM05D002513 ORTHO05D002720 3.9e-13 77.8 64 64.1
Dinv21651 Davidia involucrata HOM05D002513 ORTHO05D002720 3.9e-13 77.8 64 62.5
Migut.A01126 Erythranthe guttata HOM05D002513 ORTHO05D002720 3.9e-13 77.8 64 64.1
Hma1.2p1_0316F.1_g122910 Hydrangea macrophylla HOM05D002513 ORTHO05D002720 3.9e-13 77.8 64 62.5
Hma1.2p1_0316F.1_g122915 Hydrangea macrophylla HOM05D002513 ORTHO05D002720 3.9e-13 77.8 64 62.5
Nitab4.5_0004277g0010 Nicotiana tabacum HOM05D002513 ORTHO05D002720 3.9e-13 77.8 63 61.9
Rhsim11G0000900 Rhododendron simsii HOM05D002513 ORTHO05D002720 3.9e-13 77.8 64 62.5
vmacro00186 Vaccinium macrocarpon HOM05D002513 ORTHO05D002720 3.9e-13 77.8 64 62.5
CSS0000182 Camellia sinensis var. sinensis HOM05D002513 ORTHO05D002720 5.0e-13 77.4 64 62.5
Cc08_g12210 Coffea canephora HOM05D002513 ORTHO05D002720 5.0e-13 77.4 64 60.9
Lj8A268G24 Lonicera japonica HOM05D002513 ORTHO05D002720 5.0e-13 77.4 64 62.5
Peaxi162Scf01662g00119 Petunia axillaris HOM05D002513 ORTHO05D002720 5.0e-13 77.4 64 60.9
CAN.G841.7 Capsicum annuum HOM05D002513 ORTHO05D002720 6.6e-13 77.0 64 60.9
DCAR_008503 Daucus carota HOM05D002513 ORTHO05D002720 6.6e-13 77.0 64 60.9
EL10Ac3g07351 Beta vulgaris HOM05D002513 ORTHO05D002720 8.6e-13 76.6 64 60.9
FAN04G1005 Fragaria x ananassa HOM05D002513 ORTHO05D002720 8.6e-13 76.6 65 58.5
Nn1g02339 Nelumbo nucifera HOM05D002513 ORTHO05D002720 8.6e-13 76.6 64 60.9
Sabra01G0134900 Salix brachista HOM05D002513 ORTHO05D002720 8.6e-13 76.6 66 57.6
GSVIVG01006271001 Vitis vinifera HOM05D002513 ORTHO05D002720 8.6e-13 76.6 64 59.4
Hund14574 Selenicereus undatus HOM05D002513 ORTHO05D002720 1.1e-12 76.3 64 60.9
TWI81G0262 Tripterygium wilfordii HOM05D002513 ORTHO05D002720 1.1e-12 76.3 64 62.5
FAN08G2557 Fragaria x ananassa HOM05D002513 ORTHO05D002720 1.5e-12 75.9 64 59.4
FAN13G1831 Fragaria x ananassa HOM05D002513 ORTHO05D002720 1.5e-12 75.9 64 59.4
FAN18G4043 Fragaria x ananassa HOM05D002513 ORTHO05D002720 1.5e-12 75.9 64 59.4
Nitab4.5_0006555g0030 Nicotiana tabacum HOM05D002513 ORTHO05D002720 1.5e-12 75.9 64 59.4
Prupe.5G066400 Prunus persica HOM05D002513 ORTHO05D002720 1.5e-12 75.9 64 59.4
RcHm_v2.0_Chr7g0203801 Rosa chinensis HOM05D002513 ORTHO05D002720 1.5e-12 75.9 64 59.4
SGA_v2.0_scaffold199G41180 Striga asiatica HOM05D002513 ORTHO05D002720 1.5e-12 75.9 64 62.5
Dinv39163 Davidia involucrata HOM05D002513 ORTHO05D002720 1.9e-12 75.5 64 60.9
Nn4g26338 Nelumbo nucifera HOM05D002513 ORTHO05D002720 1.9e-12 75.5 64 60.9
Sed0012573 Sechium edule HOM05D002513 ORTHO05D002720 1.9e-12 75.5 64 60.9
Solyc10g083150.3 Solanum lycopersicum HOM05D002513 ORTHO05D002720 1.9e-12 75.5 64 59.4
Sopen10g032620 Solanum pennellii HOM05D002513 ORTHO05D002720 1.9e-12 75.5 64 59.4
Atru.chr9.1284 Acer truncatum HOM05D002513 ORTHO05D002720 2.5e-12 75.1 64 59.4
AUR62018445 Chenopodium quinoa HOM05D002513 ORTHO05D002720 2.5e-12 75.1 62 61.3
AUR62020988 Chenopodium quinoa HOM05D002513 ORTHO05D002720 2.5e-12 75.1 62 61.3
HanXRQChr13g0417821 Helianthus annuus HOM05D002513 ORTHO05D002720 2.5e-12 75.1 64 57.8
THA.LOC104814469 Tarenaya hassleriana HOM05D002513 ORTHO05D002720 2.5e-12 75.1 68 54.4
CANSAT21G1233 Cannabis sativa HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 59.4
ClCG10G002560 Citrullus lanatus HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 59.4
MELO3C013928.2 Cucumis melo HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 59.4
CsaV3_3G002590 Cucumis sativus L. HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 59.4
HanXRQChr03g0088821 Helianthus annuus HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 57.8
Lsat_1_v5_gn_6_92441 Lactuca sativa HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 57.8
MBI11_g31274_MAGBIO Magnolia biondii HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 60.9
Medtr4g100750 Medicago truncatula HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 59.4
Psat4g074080 Pisum sativum HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 59.4
QL12p011564 Quercus lobata HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 59.4
TAR629G3140 Trochodendron aralioides HOM05D002513 ORTHO05D002720 3.3e-12 74.7 64 59.4
arahy.Tifrunner.gnm1.ann1.2PBN0R Arachis hypogaea HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
arahy.Tifrunner.gnm1.ann1.40EGC8 Arachis hypogaea HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
arahy.Tifrunner.gnm1.ann1.98R2QB Arachis hypogaea HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
arahy.Tifrunner.gnm1.ann1.PD7I3L Arachis hypogaea HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Ciclev10018818m.g Citrus clementina HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
COL.COLO4_10827 Corchorus olitorius HOM05D002513 ORTHO05D002720 4.3e-12 74.3 63 58.7
COL.COLO4_37135 Corchorus olitorius HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Glyma.05G061500 Glycine max HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Glyma.17G143300 Glycine max HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Lj4g0017155 Lotus japonicus HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Lalb_Chr16g0386791 Lupinus albus HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Manes.01G082800 Manihot esculenta HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Phvul.003G222100 Phaseolus vulgaris HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Potri.001G156000 Populus trichocarpa HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Potri.003G078800 Populus trichocarpa HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
Sabra03G0048900 Salix brachista HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
SEGI_13497 Sequoiadendron giganteum HOM05D002513 ORTHO05D002720 4.3e-12 74.3 64 59.4
TPR.G37621 Trifolium pratense HOM05D002070 ORTHO05D002489 4.3e-12 74.3 64 59.4
Cpa.g.sc29.189 Carica papaya HOM05D002513 ORTHO05D002720 5.6e-12 73.9 64 59.4
Cpa.g.sc53.64 Carica papaya HOM05D002513 ORTHO05D002720 5.6e-12 73.9 64 57.8
CDE06G2836 Ceratophyllum demersum HOM05D002513 ORTHO05D002720 7.3e-12 73.6 64 57.8
Duzib068G0483 Durio zibethinus HOM05D002513 ORTHO05D002720 7.3e-12 73.6 64 57.8
PGR042G3434 Punica granatum HOM05D002513 ORTHO05D002720 7.3e-12 73.6 64 59.4
TAR636G3267 Trochodendron aralioides HOM05D002513 ORTHO05D002720 7.3e-12 73.6 64 57.8
Gohir.A12G215700 Gossypium hirsutum HOM05D002513 ORTHO05D002720 9.5e-12 73.2 64 57.8
Gorai.004G197000 Gossypium raimondii HOM05D002513 ORTHO05D002720 9.5e-12 73.2 64 57.8
Gorai.008G233900 Gossypium raimondii HOM05D002513 ORTHO05D002720 9.5e-12 73.2 64 57.8
Lalb_Chr05g0221181 Lupinus albus HOM05D002513 ORTHO05D002720 9.5e-12 73.2 64 57.8
MD04G1061900 Malus domestica HOM05D002513 ORTHO05D002720 9.5e-12 73.2 64 56.2
MD06G1055600 Malus domestica HOM05D002513 ORTHO05D002720 9.5e-12 73.2 64 56.2
PSO210G4067 Papaver somniferum HOM05D002513 ORTHO05D002720 9.5e-12 73.2 64 59.4
PSO832G0398 Papaver somniferum HOM05D002513 ORTHO05D002720 9.5e-12 73.2 64 59.4
Sc01g0008310 Simmondsia chinensis HOM05D002513 ORTHO05D002720 9.5e-12 73.2 68 54.4
Thecc.03G248600 Theobroma cacao HOM05D002513 ORTHO05D002720 9.5e-12 73.2 64 57.8
vmacro14069 Vaccinium macrocarpon HOM05D002513 ORTHO05D002720 9.5e-12 73.2 61 62.3
arahy.Tifrunner.gnm1.ann1.VIP11X Arachis hypogaea HOM05D002513 ORTHO05D002720 1.2e-11 72.8 64 57.8
arahy.Tifrunner.gnm1.ann1.Y2TGKW Arachis hypogaea HOM05D002513 ORTHO05D002720 1.2e-11 72.8 64 57.8
Haze_07948 Corylus avellana HOM05D002513 ORTHO05D002720 1.2e-11 72.8 63 58.7
Gohir.A08G168800 Gossypium hirsutum HOM05D002513 ORTHO05D002720 1.2e-11 72.8 64 57.8
unitig_8.g3015 Utricularia gibba HOM05D002513 ORTHO05D002720 1.2e-11 72.8 64 59.4
Eucgr.E00408 Eucalyptus grandis HOM05D002513 ORTHO05D002720 1.6e-11 72.4 64 57.8
arahy.Tifrunner.gnm1.ann1.18SBFH Arachis hypogaea HOM05D002513 ORTHO05D002720 2.1e-11 72.0 60 61.7
arahy.Tifrunner.gnm1.ann1.H0C62V Arachis hypogaea HOM05D002513 ORTHO05D002720 2.1e-11 72.0 60 61.7
Ca_21976_v3 Cicer arietinum L. HOM05D002513 ORTHO05D002720 2.1e-11 72.0 64 56.2
DCAR_027767 Daucus carota HOM05D002513 ORTHO05D002720 2.1e-11 72.0 63 55.6
TAR636G2655 Trochodendron aralioides HOM05D002513 ORTHO05D002720 2.1e-11 72.0 64 57.8
TAR633G0646 Trochodendron aralioides HOM05D002513 ORTHO05D002720 2.8e-11 71.6 64 57.8
Lalb_Chr09g0329991 Lupinus albus HOM05D002513 ORTHO05D002720 3.6e-11 71.2 64 56.2
Aqoxy2G03401 Aquilegia oxysepala HOM05D002513 ORTHO05D002720 4.7e-11 70.9 64 59.4
arahy.Tifrunner.gnm1.ann1.3AS7PC Arachis hypogaea HOM05D002513 ORTHO05D002720 4.7e-11 70.9 64 56.2
THA.LOC104798367 Tarenaya hassleriana HOM05D002513 ORTHO05D002720 4.7e-11 70.9 64 54.7
Aqoxy5G00460 Aquilegia oxysepala HOM05D002513 ORTHO05D002720 6.1e-11 70.5 64 57.8
ECA240G4211 Erigeron canadensis HOM05D002513 ORTHO05D002720 6.1e-11 70.5 68 52.9
Gohir.D08G187300 Gossypium hirsutum HOM05D002513 ORTHO05D002720 6.1e-11 70.5 64 56.2
arahy.Tifrunner.gnm1.ann1.F98T17 Arachis hypogaea HOM05D002513 ORTHO05D002720 8.0e-11 70.1 64 56.2
Ca_03894_v3 Cicer arietinum L. HOM05D002513 ORTHO05D002720 8.0e-11 70.1 64 56.2
TPR.G24353 Trifolium pratense HOM05D002513 ORTHO05D002720 8.0e-11 70.1 64 56.2
arahy.Tifrunner.gnm1.ann1.AB5AZK Arachis hypogaea HOM05D002513 ORTHO05D002720 1.0e-10 69.7 64 56.2
PSO210G5624 Papaver somniferum HOM05D002513 ORTHO05D002720 1.0e-10 69.7 64 56.2
PSO761G0324 Papaver somniferum HOM05D002513 ORTHO05D002720 1.0e-10 69.7 64 56.2
Psat5g188640 Pisum sativum HOM05D002513 ORTHO05D002720 1.0e-10 69.7 64 56.2
SHI07796 Sapria himalayana HOM05D002513 ORTHO05D002720 1.0e-10 69.7 64 54.7
Rhsim07G0110400 Rhododendron simsii HOM05D002513 ORTHO05D002720 1.4e-10 69.3 64 56.2
arahy.Tifrunner.gnm1.ann1.V507XA Arachis hypogaea HOM05D002513 ORTHO05D002720 1.8e-10 68.9 64 57.8
HPP92_004367 Vanilla planifolia HOM05D002513 ORTHO05D002720 2.3e-10 68.6 64 56.2
Aa31LG6G140 Aethionema arabicum HOM05D002513 ORTHO05D002720 4.0e-10 67.8 64 53.1
Medtr5g097760 Medicago truncatula HOM05D002513 ORTHO05D002720 4.0e-10 67.8 64 54.7
Aa31sc151G10 Aethionema arabicum HOM05D002513 ORTHO05D002720 5.2e-10 67.4 64 51.6
Carub.0008s0036 Capsella rubella HOM05D002513 ORTHO05D002720 5.2e-10 67.4 64 53.1
Thhalv10000768m.g Eutrema salsugineum HOM05D002513 ORTHO05D002720 5.2e-10 67.4 64 51.6
Mapoly0024s0115 Marchantia polymorpha HOM05D002513 ORTHO05D002720 5.2e-10 67.4 64 53.1
Sp2g12130 Schrenkiella parvula HOM05D002513 ORTHO05D002720 5.2e-10 67.4 64 51.6
Sp7g16790 Schrenkiella parvula HOM05D002513 ORTHO05D002720 5.2e-10 67.4 64 51.6
Atru.chr1.2693 Acer truncatum HOM05D002513 ORTHO05D002720 6.8e-10 67.0 68 52.9
Atru.chr7.815 Acer truncatum HOM05D002513 ORTHO05D002720 6.8e-10 67.0 68 54.4
AL8G10610 Arabidopsis lyrata HOM05D002513 ORTHO05D002720 6.8e-10 67.0 64 51.6
AT5G47430 Arabidopsis thaliana HOM05D002513 ORTHO05D002720 6.8e-10 67.0 64 51.6
Medtr5g098230 Medicago truncatula HOM05D002513 ORTHO05D002720 6.8e-10 67.0 64 54.7
AT4G17410 Arabidopsis thaliana HOM05D002513 ORTHO05D002720 8.9e-10 66.6 64 50.0
Carub.0007s2401 Capsella rubella HOM05D002513 ORTHO05D002720 8.9e-10 66.6 64 50.0
Thhalv10024408m.g Eutrema salsugineum HOM05D002513 ORTHO05D002720 8.9e-10 66.6 64 50.0
BcaB07g30777 Brassica carinata HOM05D002513 ORTHO05D002720 1.2e-09 66.2 64 50.0
BcaC04g21626 Brassica carinata HOM05D002513 ORTHO05D002720 1.2e-09 66.2 64 50.0
A09p23030 Brassica napus HOM05D002513 ORTHO05D002720 1.2e-09 66.2 64 50.0
C09p29740 Brassica napus HOM05D002513 ORTHO05D002720 1.2e-09 66.2 64 50.0
BolC9t55837H Brassica oleracea HOM05D002513 ORTHO05D002720 1.2e-09 66.2 64 50.0
BraA09t37907Z Brassica rapa HOM05D002513 ORTHO05D002720 1.2e-09 66.2 64 50.0
Os10g0431000 Oryza sativa ssp. japonica HOM05D002513 ORTHO05D002720 1.2e-09 66.2 64 51.6
AagrBONN_evm.TU.Sc2ySwM_362.299 Anthoceros agrestis HOM05D002513 ORTHO05D002720 2.6e-09 65.1 64 51.6
Atru.chr7.809 Acer truncatum HOM05D002513 ORTHO05D002720 3.4e-09 64.7 68 51.5
CARHR173950 Cardamine hirsuta HOM05D002513 ORTHO05D002720 3.4e-09 64.7 64 50.0
Medtr5g081800 Medicago truncatula HOM05D002513 ORTHO05D002720 3.4e-09 64.7 64 53.1
Zm00001eb047610 Zea mays HOM05D002513 ORTHO05D002720 3.4e-09 64.7 64 50.0
BcaC09g50468 Brassica carinata HOM05D002513 ORTHO05D002720 4.4e-09 64.3 64 50.0
BcaNung00096 Brassica carinata HOM05D002513 ORTHO05D002720 4.4e-09 64.3 64 50.0
A01p20000 Brassica napus HOM05D002513 ORTHO05D002720 4.4e-09 64.3 64 50.0
C01p25090 Brassica napus HOM05D002513 ORTHO05D002720 4.4e-09 64.3 64 50.0
BolC1t02460H Brassica oleracea HOM05D002513 ORTHO05D002720 4.4e-09 64.3 64 50.0
BraA01t01923Z Brassica rapa HOM05D002513 ORTHO05D002720 4.4e-09 64.3 64 50.0
Mapoly0094s0033 Marchantia polymorpha HOM05D002513 ORTHO05D002720 1.7e-08 62.4 64 48.4
CARHR224010 Cardamine hirsuta HOM05D002513 ORTHO05D002720 2.9e-08 61.6 64 46.9
Peaxi162Scf00076g00063 Petunia axillaris HOM05D002513 ORTHO05D002720 3.7e-08 61.2 64 53.1
Nitab4.5_0000348g0110 Nicotiana tabacum HOM05D002513 ORTHO05D002720 4.9e-08 60.8 64 50.0
Peaxi162Scf00076g00915 Petunia axillaris HOM05D002513 ORTHO05D002720 4.9e-08 60.8 64 53.1
Nitab4.5_0001070g0030 Nicotiana tabacum HOM05D002513 ORTHO05D002720 6.4e-08 60.5 64 51.6
Pp3c1_38750 Physcomitrium patens HOM05D002513 ORTHO05D002720 8.3e-08 60.1 64 46.9
PGSC0003DMG400001600 Solanum tuberosum HOM05D002513 ORTHO05D002720 8.3e-08 60.1 64 51.6
Peaxi162Scf01003g00012 Petunia axillaris HOM05D002513 ORTHO05D002720 1.4e-07 59.3 64 51.6
Sopen01g052990 Solanum pennellii HOM05D002513 ORTHO05D002720 1.4e-07 59.3 64 51.6
PGSC0003DMG400001652 Solanum tuberosum HOM05D002513 ORTHO05D002720 2.4e-07 58.5 64 50.0
Solyc01g110950.3 Solanum lycopersicum HOM05D002513 ORTHO05D002720 3.2e-07 58.2 64 50.0
CAN.G1329.25 Capsicum annuum HOM05D002513 ORTHO05D002720 4.1e-07 57.8 63 50.8
HPP92_004365 Vanilla planifolia HOM05D002513 ORTHO05D002720 4.1e-07 57.8 59 52.5
EL10Ac5g12361 Beta vulgaris HOM05D002513 ORTHO05D002720 5.4e-07 57.4 68 47.1
CBR_g21758 Chara braunii HOM05D002513 ORTHO05D002720 5.4e-07 57.4 61 49.2
ATR0697G259 Amborella trichopoda HOM05D002513 ORTHO05D002720 7.0e-07 57.0 64 50.0
AUR62007108 Chenopodium quinoa HOM05D002513 ORTHO05D002720 7.0e-07 57.0 64 45.3
Migut.A01039 Erythranthe guttata HOM05D002513 ORTHO05D002720 1.2e-06 56.2 64 45.3
MCO16G016 Micromonas commoda HOM05D002513 ORTHO05D002720 4.6e-06 54.3 64 46.9
AUR62019970 Chenopodium quinoa HOM05D002513 ORTHO05D002720 6.0e-06 53.9 64 43.8
SMO356G0348 Selaginella moellendorffii HOM05D002513 ORTHO05D002720 7.8e-06 53.5 64 43.8


User provided reference genes

Program Settings