Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14716 Nelumbo nucifera HOM05D000216 ORTHO05D000634 4.0e-33 144.1 67 100.0
Nn256s45908 Nelumbo nucifera HOM05D000216 ORTHO05D000634 3.2e-22 107.8 50 100.0
Nn2g14713 Nelumbo nucifera HOM05D000216 ORTHO05D000634 3.2e-22 107.8 50 100.0
Nn2g14718 Nelumbo nucifera HOM05D000216 ORTHO05D000634 3.2e-22 107.8 50 100.0
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 3.8e-07 57.8 31 87.1
FAN27G0873 Fragaria x ananassa HOM05D000743 ORTHO05D000580 4.9e-07 57.4 38 71.1
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
arahy.Tifrunner.gnm1.ann1.KRC0HM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
arahy.Tifrunner.gnm1.ann1.ZJYB0J Arachis hypogaea HOM05D000216 ORTHO05D000473 2.5e-06 55.1 30 86.7
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.5e-06 55.1 30 86.7
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
BolC5t28870H Brassica oleracea HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
BraSC140t45588Z Brassica rapa HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
MELO3C001093.2 Cucumis melo HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
HanXRQChr03g0073121 Helianthus annuus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.5e-06 55.1 30 86.7
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Lj2P1224T100 Lonicera japonica HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Lj2P1227T99 Lonicera japonica HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Lalb_Chr22g0361661 Lupinus albus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 2.5e-06 55.1 30 86.7
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
SHI35296 Sapria himalayana HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.5e-06 55.1 30 86.7
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund28153 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund28617 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
GSVIVG01019173001 Vitis vinifera HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 2.5e-06 55.1 30 86.7
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.2e-06 54.7 32 81.2
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 5.5e-06 53.9 30 83.3
Ah.10g028700 Amaranthus hybridus HOM05D029963 ORTHO05D026499 7.1e-06 53.5 27 88.9
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 7.1e-06 53.5 30 83.3
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 7.1e-06 53.5 30 83.3
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 7.1e-06 53.5 30 83.3
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 7.1e-06 53.5 27 88.9
GSVIVG01017094001 Vitis vinifera HOM05D000216 ORTHO05D000634 7.1e-06 53.5 30 83.3
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 9.3e-06 53.1 41 65.9


User provided reference genes

Program Settings