Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14694 Nelumbo nucifera HOM05D005149 ORTHO05D006251 9.7e-206 719.9 365 100.0
TAR633G2177 Trochodendron aralioides HOM05D005149 ORTHO05D006251 1.7e-149 533.1 351 79.5
PSO339G6394 Papaver somniferum HOM05D005149 ORTHO05D006251 6.8e-135 484.6 360 71.4
CSS0030945 Camellia sinensis var. sinensis HOM05D005149 ORTHO05D006251 4.4e-134 481.9 356 71.1
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 9.9e-134 480.7 350 71.1
Dinv24594 Davidia involucrata HOM05D005149 ORTHO05D006251 8.3e-133 477.6 361 68.7
Actinidia17467 Actinidia chinensis HOM05D005149 ORTHO05D006251 7.8e-131 471.1 359 69.6
RcHm_v2.0_Chr1g0331361 Rosa chinensis HOM05D005149 ORTHO05D006251 1.5e-129 466.8 355 67.3
Aqoxy1G01331 Aquilegia oxysepala HOM05D005149 ORTHO05D006251 2.1e-128 463.0 354 71.2
Phvul.011G187600 Phaseolus vulgaris HOM05D005149 ORTHO05D006251 1.8e-127 459.9 361 64.3
MD07G1054600 Malus domestica HOM05D005149 ORTHO05D006251 4.0e-127 458.8 354 66.7
FAN12G0991 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.2e-126 457.2 355 66.5
CANSAT56G0938 Cannabis sativa HOM05D005149 ORTHO05D006251 5.8e-126 454.9 363 64.7
FvH4_7g05040 Fragaria vesca HOM05D005149 ORTHO05D006251 5.8e-126 454.9 354 65.5
FAN17G1198 Fragaria x ananassa HOM05D005149 ORTHO05D006251 5.8e-126 454.9 355 66.5
FvH4_4g11870 Fragaria vesca HOM05D005149 ORTHO05D006251 1.7e-125 453.4 353 66.6
Haze_03404 Corylus avellana HOM05D005149 ORTHO05D006251 2.9e-125 452.6 361 64.3
DCAR_023093 Daucus carota HOM05D005149 ORTHO05D006251 4.9e-125 451.8 351 68.7
Lalb_Chr19g0132531 Lupinus albus HOM05D005149 ORTHO05D006251 6.4e-125 451.4 354 66.1
Glyma.08G228000 Glycine max HOM05D005149 ORTHO05D006251 2.4e-124 449.5 360 64.2
FAN03G2277 Fragaria x ananassa HOM05D005149 ORTHO05D006251 3.2e-124 449.1 352 65.1
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea HOM05D005149 ORTHO05D006251 4.2e-124 448.7 380 61.6
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea HOM05D005149 ORTHO05D006251 4.2e-124 448.7 380 61.6
MD02G1263600 Malus domestica HOM05D005149 ORTHO05D006251 4.2e-124 448.7 361 65.9
MSTRG.5085 Avicennia marina HOM05D005149 ORTHO05D006251 5.4e-124 448.4 354 65.8
Lj3g0016494 Lotus japonicus HOM05D005149 ORTHO05D006251 1.2e-123 447.2 358 64.0
HanXRQChr06g0174201 Helianthus annuus HOM05D005149 ORTHO05D006251 1.6e-123 446.8 361 65.7
Lj7C543G12 Lonicera japonica HOM05D005149 ORTHO05D006251 1.6e-123 446.8 385 63.4
vmacro20844 Vaccinium macrocarpon HOM05D005149 ORTHO05D006251 1.6e-123 446.8 365 67.1
Ca_12171_v3 Cicer arietinum L. HOM05D005149 ORTHO05D006251 2.1e-123 446.4 356 63.8
Migut.N01878 Erythranthe guttata HOM05D005149 ORTHO05D006251 4.6e-123 445.3 355 66.8
Manes.07G084100 Manihot esculenta HOM05D005149 ORTHO05D006251 4.6e-123 445.3 350 67.1
Cfa010450 Carpinus fangiana HOM05D005149 ORTHO05D006251 6.0e-123 444.9 378 61.1
Lalb_Chr03g0032361 Lupinus albus HOM05D005149 ORTHO05D006251 3.9e-122 442.2 358 63.1
Psat0s3059g0040 Pisum sativum HOM05D005149 ORTHO05D006251 5.1e-122 441.8 359 63.5
FAN07G2641 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.1e-121 440.7 355 65.1
MBI19_g30303_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 1.9e-121 439.9 359 66.0
Oeu058668.1 Olea europaea HOM05D005149 ORTHO05D006251 1.9e-121 439.9 352 65.1
Medtr8g044150 Medicago truncatula HOM05D005149 ORTHO05D006251 5.6e-121 438.3 360 62.8
Thecc.10G129400 Theobroma cacao HOM05D005149 ORTHO05D006251 7.3e-121 438.0 366 62.3
ECA246G4563 Erigeron canadensis HOM05D005149 ORTHO05D006251 3.6e-120 435.6 357 63.3
FAN12G2325 Fragaria x ananassa HOM05D005149 ORTHO05D006251 6.2e-120 434.9 357 64.7
Sed0022214 Sechium edule HOM05D005149 ORTHO05D006251 8.1e-120 434.5 348 64.9
CiPaw.13G047200 Carya illinoinensis HOM05D005149 ORTHO05D006251 1.4e-119 433.7 361 63.4
Gohir.D13G181800 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.4e-119 433.0 361 62.0
Sopen01g040620 Solanum pennellii HOM05D005149 ORTHO05D006251 4.0e-119 432.2 355 64.8
CsaV3_6G035780 Cucumis sativus L. HOM05D005149 ORTHO05D006251 6.9e-119 431.4 355 63.9
SalBow4G1949 Salvia bowleyana HOM05D005149 ORTHO05D006251 9.0e-119 431.0 374 63.9
Hund06827 Selenicereus undatus HOM05D005149 ORTHO05D006251 1.5e-118 430.3 355 62.5
Solyc01g096910.3 Solanum lycopersicum HOM05D005149 ORTHO05D006251 1.5e-118 430.3 360 63.9
QL04p050393 Quercus lobata HOM05D005149 ORTHO05D006251 2.0e-118 429.9 385 60.8
PGSC0003DMG400027500 Solanum tuberosum HOM05D005149 ORTHO05D006251 2.0e-118 429.9 357 63.9
HPP92_019772 Vanilla planifolia HOM05D005149 ORTHO05D006251 2.0e-118 429.9 351 65.8
Gorai.013G207400 Gossypium raimondii HOM05D005149 ORTHO05D006251 9.9e-118 427.6 361 61.2
Gohir.A11G310500 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.3e-117 427.2 361 61.2
Gohir.A09G246100 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.2e-117 426.4 361 61.2
Ciclev10015236m.g Citrus clementina HOM05D005149 ORTHO05D006251 2.9e-117 426.0 357 63.3
MELO3C011385.2 Cucumis melo HOM05D005149 ORTHO05D006251 2.9e-117 426.0 355 63.7
PGR142G4466 Punica granatum HOM05D005149 ORTHO05D006251 7.1e-116 421.4 363 63.1
Gorai.006G271200 Gossypium raimondii HOM05D005149 ORTHO05D006251 9.3e-116 421.0 361 60.4
Potri.010G246400 Populus trichocarpa HOM05D005149 ORTHO05D006251 2.1e-115 419.9 359 62.4
Lsat_1_v5_gn_3_25820 Lactuca sativa HOM05D005149 ORTHO05D006251 4.6e-115 418.7 367 60.8
Gohir.D09G246700 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.3e-114 417.2 361 60.1
TWI38G0882 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 3.6e-112 409.1 348 62.4
AT5G04920 Arabidopsis thaliana HOM05D005149 ORTHO05D006251 3.1e-111 406.0 344 63.7
EL10Ac4g08774 Beta vulgaris HOM05D005149 ORTHO05D006251 9.0e-111 404.4 351 61.5
Ah.04g162660 Amaranthus hybridus HOM05D005149 ORTHO05D006251 5.8e-110 401.7 353 60.6
AL6G14620 Arabidopsis lyrata HOM05D005149 ORTHO05D006251 7.6e-110 401.4 344 62.5
Aa31LG11G5780 Aethionema arabicum HOM05D005149 ORTHO05D006251 6.4e-109 398.3 346 62.1
SGA_v2.0_scaffold196G40993 Striga asiatica HOM05D005149 ORTHO05D006251 1.4e-108 397.1 455 51.0
Carub.0010s0002 Capsella rubella HOM05D005149 ORTHO05D006251 3.2e-108 396.0 344 61.9
Sp6g37880 Schrenkiella parvula HOM05D005149 ORTHO05D006251 3.2e-108 396.0 344 61.6
Sc09g0004900 Simmondsia chinensis HOM05D005149 ORTHO05D006251 4.2e-108 395.6 360 59.4
THA.LOC104816483 Tarenaya hassleriana HOM05D005149 ORTHO05D006251 9.3e-108 394.4 344 61.9
Atru.chr12.1229 Acer truncatum HOM05D005149 ORTHO05D006251 1.2e-107 394.0 349 61.3
Carub.0006s0386 Capsella rubella HOM05D005149 ORTHO05D006251 3.5e-107 392.5 344 61.9
unitig_749.g13551 Utricularia gibba HOM05D005149 ORTHO05D006251 3.5e-107 392.5 355 59.4
FAN01G0635 Fragaria x ananassa HOM05D005149 ORTHO05D006251 4.6e-107 392.1 350 58.6
SHI21243 Sapria himalayana HOM05D005149 ORTHO05D006251 1.9e-105 386.7 347 60.2
CDE04G0393 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 3.3e-105 386.0 350 59.7
Thhalv10013568m.g Eutrema salsugineum HOM05D005149 ORTHO05D006251 3.3e-105 386.0 344 60.5
Peaxi162Scf00647g00319 Petunia axillaris HOM05D005149 ORTHO05D006251 4.3e-105 385.6 361 58.7
A10p31210 Brassica napus HOM05D005149 ORTHO05D006251 2.8e-104 382.9 350 58.6
CARHR208340 Cardamine hirsuta HOM05D005149 ORTHO05D006251 6.9e-103 378.3 344 58.4
Eucgr.G02641 Eucalyptus grandis HOM05D005149 ORTHO05D006251 6.9e-103 378.3 316 63.0
C09p71830 Brassica napus HOM05D005149 ORTHO05D006251 9.0e-103 377.9 346 58.7
BolC9t59932H Brassica oleracea HOM05D005149 ORTHO05D006251 9.0e-103 377.9 346 58.7
BraA10t45165Z Brassica rapa HOM05D005149 ORTHO05D006251 2.6e-102 376.3 347 57.9
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 2.9e-101 372.9 347 58.8
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis HOM05D005149 ORTHO05D006251 3.2e-100 369.4 366 54.6
AUR62014307 Chenopodium quinoa HOM05D005149 ORTHO05D006251 4.2e-100 369.0 367 56.7
Mapoly0072s0023 Marchantia polymorpha HOM05D005149 ORTHO05D006251 7.1e-100 368.2 364 54.9
Sed0016259 Sechium edule HOM05D005149 ORTHO05D006251 3.0e-98 362.8 364 56.6
BcaC06g32201 Brassica carinata HOM05D005149 ORTHO05D006251 2.5e-97 359.8 352 56.8
AUR62034100 Chenopodium quinoa HOM05D005149 ORTHO05D006251 3.3e-97 359.4 354 57.9
Os01g0813500 Oryza sativa ssp. japonica HOM05D005149 ORTHO05D006251 4.1e-95 352.4 365 54.0
Pp3c23_21630 Physcomitrium patens HOM05D005149 ORTHO05D006251 1.5e-94 350.5 365 52.9
Zm00001eb149970 Zea mays HOM05D005149 ORTHO05D006251 4.5e-94 349.0 368 55.4
Prupe.2G061300 Prunus persica HOM05D005149 ORTHO05D006251 9.7e-89 331.3 353 51.8
CAN.G134.53 Capsicum annuum HOM05D005149 ORTHO05D006251 5.9e-86 322.0 262 67.2
SMO011G0007 Selaginella moellendorffii HOM05D005149 ORTHO05D006251 3.8e-85 319.3 351 53.8
Gohir.D13G182000 Gossypium hirsutum HOM05D005149 ORTHO05D006251 7.9e-83 311.6 316 53.2
Rhsim01G0121200 Rhododendron simsii HOM05D005149 ORTHO05D006251 1.8e-82 310.5 286 62.6
TPR.G35740 Trifolium pratense HOM05D005149 ORTHO05D006251 3.9e-82 309.3 180 86.1
Nitab4.5_0005056g0010 Nicotiana tabacum HOM05D005149 ORTHO05D006251 1.1e-81 307.8 285 61.1
VMungo1127G0494 Vigna mungo HOM05D005149 ORTHO05D006251 9.7e-81 304.7 319 51.7
GSVIVG01010707001 Vitis vinifera HOM05D005149 ORTHO05D006251 1.3e-80 304.3 180 87.2
ClCG08G010780 Citrullus lanatus HOM05D005149 ORTHO05D006251 3.7e-80 302.8 280 58.9
ATR0068G114 Amborella trichopoda HOM05D005149 ORTHO05D006251 3.4e-78 296.2 281 60.9
Zm00001eb369140 Zea mays HOM05D005149 ORTHO05D006251 6.5e-77 292.0 235 67.7
Duzib106G0431 Durio zibethinus HOM05D005149 ORTHO05D006251 7.2e-76 288.5 291 54.6
GSVIVG01027217001 Vitis vinifera HOM05D005149 ORTHO05D006251 3.6e-75 286.2 165 89.1
CBR_g40666 Chara braunii HOM05D005149 ORTHO05D006251 8.8e-74 281.6 426 42.5
Cc02_g32050 Coffea canephora HOM05D005149 ORTHO05D006251 2.6e-73 280.0 165 84.8
SEGI_09620 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 2.5e-68 263.5 276 52.9
Hma1.2p1_0327F.1_g126320 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 4.2e-60 236.1 209 60.8
Hma1.2p1_0327F.1_g126340 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 1.0e-58 231.5 140 82.1
Sabra08G0007600 Salix brachista HOM05D005149 ORTHO05D006251 9.1e-55 218.4 276 48.2
CDE02G4629 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 5.9e-46 189.1 350 38.6
MCO16G624 Micromonas commoda HOM05D005149 ORTHO05D006251 7.3e-44 182.2 352 34.4
Cpa.g.sc54.66 Carica papaya HOM05D005149 ORTHO05D006251 3.4e-41 173.3 197 48.2
Cre03.g159750 Chlamydomonas reinhardtii HOM05D005149 ORTHO05D006251 5.7e-41 172.6 186 49.5
Gorai.013G207600 Gossypium raimondii HOM05D005149 ORTHO05D006251 8.3e-40 168.7 106 80.2
Glyma.15G221000 Glycine max HOM05D005149 ORTHO05D006251 7.0e-39 165.6 98 83.7
Cpa.g.c41130 Carica papaya HOM05D005149 ORTHO05D006251 9.2e-39 165.2 85 89.4
CAN.G134.55 Capsicum annuum HOM05D005149 ORTHO05D006251 1.0e-37 161.8 99 84.8
PRCOL_00005700 Prasinoderma coloniale HOM05D005149 ORTHO05D006251 1.5e-36 157.9 162 50.6
Nn2g14693 Nelumbo nucifera HOM05D005149 ORTHO05D006251 9.5e-36 155.2 155 59.4
Migut.O00436 Erythranthe guttata HOM05D005149 ORTHO05D006251 1.2e-35 154.8 181 47.0
VMungo1127G1160 Vigna mungo HOM05D005149 ORTHO05D000001 1.2e-30 138.3 80 81.2
MD12G1098600 Malus domestica HOM05D005149 ORTHO05D006251 5.6e-28 129.4 86 74.4
Cpa.g.sc54.64 Carica papaya HOM05D005149 ORTHO05D006251 6.0e-22 109.4 140 48.6
SEGI_10345 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 2.5e-20 104.0 63 77.8
Cfa024879 Carpinus fangiana HOM05D005149 ORTHO05D006251 3.3e-20 103.6 230 30.9
BcaB04g17834 Brassica carinata HOM05D005149 ORTHO05D017514 4.6e-14 83.2 92 44.6
AagrBONN_evm.TU.Sc2ySwM_369.516 Anthoceros agrestis HOM05D005149 ORTHO05D006251 2.5e-12 77.4 147 40.1
Rhsim04G0076600 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.6e-12 75.5 46 76.1
AagrBONN_evm.TU.Sc2ySwM_117.426 Anthoceros agrestis HOM05D005149 ORTHO05D006251 1.6e-06 58.2 147 34.0


User provided reference genes

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