Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g12266 Nelumbo nucifera HOM05D000399 ORTHO05D010012 1.9e-92 342.4 169 100.0
Nn8g39754 Nelumbo nucifera HOM05D000399 ORTHO05D000304 2.6e-20 102.8 161 41.0
Dinv42901 Davidia involucrata HOM05D000399 ORTHO05D000304 5.1e-16 88.6 148 39.2
Dinv43200 Davidia involucrata HOM05D000399 ORTHO05D000304 5.1e-16 88.6 148 39.2
Lj7C452G5 Lonicera japonica HOM05D000399 ORTHO05D000304 2.5e-15 86.3 145 36.6
Atru.chr7.191 Acer truncatum HOM05D000399 ORTHO05D000304 8.1e-14 81.3 146 37.0
Hma1.2p1_0182F.1_g080650 Hydrangea macrophylla HOM05D000399 ORTHO05D000304 5.2e-13 78.6 146 37.0
Migut.K00362 Erythranthe guttata HOM05D000399 ORTHO05D000304 6.8e-13 78.2 153 37.9
CiPaw.15G178900 Carya illinoinensis HOM05D000399 ORTHO05D000304 1.5e-12 77.0 153 37.3
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 2.6e-12 76.3 149 34.2
Actinidia38350 Actinidia chinensis HOM05D000399 ORTHO05D000304 3.4e-12 75.9 142 33.8
vmacro21876 Vaccinium macrocarpon HOM05D000399 ORTHO05D000304 3.4e-12 75.9 140 36.4
Prupe.7G252800 Prunus persica HOM05D000399 ORTHO05D000304 4.4e-12 75.5 134 37.3
Rhsim01G0049100 Rhododendron simsii HOM05D000399 ORTHO05D000304 5.8e-12 75.1 138 38.4
Lj4g0019891 Lotus japonicus HOM05D000399 ORTHO05D000304 7.5e-12 74.7 144 37.5
GSVIVG01001045001 Vitis vinifera HOM05D000399 ORTHO05D000304 7.5e-12 74.7 139 34.5
Lsat_1_v5_gn_5_90720 Lactuca sativa HOM05D000399 ORTHO05D000304 9.9e-12 74.3 143 37.1
Lalb_Chr12g0198551 Lupinus albus HOM05D000399 ORTHO05D000304 1.7e-11 73.6 155 34.2
MD15G1157600 Malus domestica HOM05D000399 ORTHO05D000304 2.2e-11 73.2 135 35.6
CSS0046958 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D010012 2.9e-11 72.8 148 35.8
FAN19G1338 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.9e-11 72.8 133 34.6
Gohir.A05G049800 Gossypium hirsutum HOM05D000399 ORTHO05D000304 2.9e-11 72.8 172 33.1
QL02p091746 Quercus lobata HOM05D000399 ORTHO05D010012 2.9e-11 72.8 149 38.3
Aqoxy7G03507 Aquilegia oxysepala HOM05D000399 ORTHO05D000304 4.9e-11 72.0 127 37.8
FvH4_1g01480 Fragaria vesca HOM05D000399 ORTHO05D000304 6.4e-11 71.6 133 34.6
Glyma.17G104100 Glycine max HOM05D000399 ORTHO05D000304 6.4e-11 71.6 137 34.3
Medtr4g116860 Medicago truncatula HOM05D000399 ORTHO05D000304 6.4e-11 71.6 138 34.8
Eucgr.C00406 Eucalyptus grandis HOM05D000399 ORTHO05D000304 8.3e-11 71.2 166 33.7
FAN23G2096 Fragaria x ananassa HOM05D000399 ORTHO05D000304 8.3e-11 71.2 133 36.8
Psat4g034160 Pisum sativum HOM05D000399 ORTHO05D000304 8.3e-11 71.2 164 36.0
MSTRG.10632 Avicennia marina HOM05D000399 ORTHO05D000304 1.4e-10 70.5 163 31.3
PSO832G3766 Papaver somniferum HOM05D000399 ORTHO05D000304 1.9e-10 70.1 149 33.6
arahy.Tifrunner.gnm1.ann1.ZFL6Z0 Arachis hypogaea HOM05D000399 ORTHO05D000304 3.2e-10 69.3 142 36.6
CSS0007492 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 4.1e-10 68.9 148 33.8
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.1e-10 68.9 140 35.7
Phvul.003G175700 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 7.1e-10 68.2 135 34.8
THA.LOC104811019 Tarenaya hassleriana HOM05D000399 ORTHO05D000304 9.2e-10 67.8 158 34.8
CAN.G407.44 Capsicum annuum HOM05D000399 ORTHO05D010012 1.6e-09 67.0 46 56.5
Ciclev10007241m.g Citrus clementina HOM05D000399 ORTHO05D000304 1.6e-09 67.0 179 31.8
Gorai.009G053300 Gossypium raimondii HOM05D000399 ORTHO05D000304 2.1e-09 66.6 174 31.0
Manes.14G140128 Manihot esculenta HOM05D000399 ORTHO05D000304 2.1e-09 66.6 151 33.8
PGR142G0104 Punica granatum HOM05D000399 ORTHO05D000304 2.1e-09 66.6 181 28.2
Glyma.13G156500 Glycine max HOM05D000399 ORTHO05D000304 2.7e-09 66.2 143 33.6
Nitab4.5_0004050g0010 Nicotiana tabacum HOM05D000399 ORTHO05D000304 2.7e-09 66.2 154 35.7
Ca_21605_v3 Cicer arietinum L. HOM05D000399 ORTHO05D000304 3.5e-09 65.9 144 32.6
Os04g0509300 Oryza sativa ssp. japonica HOM05D000399 ORTHO05D000304 3.5e-09 65.9 145 32.4
unitig_46.g18390 Utricularia gibba HOM05D000399 ORTHO05D000304 3.5e-09 65.9 158 28.5
CAN.G520.37 Capsicum annuum HOM05D000399 ORTHO05D000304 6.0e-09 65.1 143 32.9
Peaxi162Scf00347g00328 Petunia axillaris HOM05D000399 ORTHO05D000304 6.0e-09 65.1 155 33.5
Haze_19295 Corylus avellana HOM05D000399 ORTHO05D000304 7.8e-09 64.7 140 36.4
QL05p034335 Quercus lobata HOM05D000399 ORTHO05D010012 7.8e-09 64.7 73 43.8
Thecc.09G036900 Theobroma cacao HOM05D000399 ORTHO05D000304 7.8e-09 64.7 165 33.3
VMungo1215G2463 Vigna mungo HOM05D000399 ORTHO05D000304 7.8e-09 64.7 139 36.0
Cc06_g07320 Coffea canephora HOM05D000399 ORTHO05D000304 1.3e-08 63.9 172 29.1
Dinv23308 Davidia involucrata HOM05D007028 ORTHO05D010012 1.7e-08 63.5 168 29.8
FAN28G2728 Fragaria x ananassa HOM05D000399 ORTHO05D000304 1.7e-08 63.5 142 33.1
Cfa020868 Carpinus fangiana HOM05D000399 ORTHO05D008498 2.3e-08 63.2 145 33.8
HanXRQChr12g0356941 Helianthus annuus HOM05D000399 ORTHO05D000304 2.3e-08 63.2 132 34.8
RcHm_v2.0_Chr2g0086421 Rosa chinensis HOM05D000399 ORTHO05D000304 2.3e-08 63.2 134 32.1
CANSAT11G2053 Cannabis sativa HOM05D000399 ORTHO05D000304 3.0e-08 62.8 135 36.3
arahy.Tifrunner.gnm1.ann1.M5ZY6N Arachis hypogaea HOM05D000399 ORTHO05D000304 3.9e-08 62.4 139 35.3
Gohir.D05G051600 Gossypium hirsutum HOM05D000399 ORTHO05D000304 3.9e-08 62.4 174 32.2
Solyc07g005030.4 Solanum lycopersicum HOM05D000399 ORTHO05D000304 3.9e-08 62.4 153 32.0
Sopen07g001140 Solanum pennellii HOM05D000399 ORTHO05D000304 5.1e-08 62.0 144 32.6
Zm00001eb426330 Zea mays HOM05D000399 ORTHO05D000304 6.6e-08 61.6 136 31.6
Duzib168G1954 Durio zibethinus HOM05D000399 ORTHO05D000304 1.1e-07 60.8 154 33.1
Lj9C711G9 Lonicera japonica HOM05D000399 ORTHO05D000304 1.5e-07 60.5 189 26.5
Nitab4.5_0000416g0080 Nicotiana tabacum HOM05D000399 ORTHO05D000304 2.5e-07 59.7 161 33.5
arahy.Tifrunner.gnm1.ann1.E6VFRG Arachis hypogaea HOM05D000399 ORTHO05D010012 3.3e-07 59.3 36 61.1
Cfa001902 Carpinus fangiana HOM05D000399 ORTHO05D010012 3.3e-07 59.3 105 36.2
Sabra06G0144400 Salix brachista HOM05D000399 ORTHO05D000304 3.3e-07 59.3 130 36.2
TPR.G15773 Trifolium pratense HOM05D000399 ORTHO05D000304 3.3e-07 59.3 155 31.6
Thhalv10012426m.g Eutrema salsugineum HOM05D000399 ORTHO05D000304 4.3e-07 58.9 132 37.1
AUR62011271 Chenopodium quinoa HOM05D000399 ORTHO05D000304 9.5e-07 57.8 174 30.5
AUR62042026 Chenopodium quinoa HOM05D000399 ORTHO05D008498 9.5e-07 57.8 172 29.1
EL10Ac8g18835 Beta vulgaris HOM05D000399 ORTHO05D000304 2.1e-06 56.6 170 27.1
MELO3C010254.2 Cucumis melo HOM05D000399 ORTHO05D000304 2.8e-06 56.2 135 31.9
EL10Ac8g18832 Beta vulgaris HOM05D000399 ORTHO05D000304 3.6e-06 55.8 171 29.2
DCAR_008820 Daucus carota HOM05D000399 ORTHO05D000304 3.6e-06 55.8 72 43.1
Sp6g24100 Schrenkiella parvula HOM05D000399 ORTHO05D000304 3.6e-06 55.8 130 33.1
EL10Ac8g18834 Beta vulgaris HOM05D000399 ORTHO05D000304 4.7e-06 55.5 170 27.1
CsaV3_1G028590 Cucumis sativus L. HOM05D000399 ORTHO05D000304 4.7e-06 55.5 135 31.9
Potri.006G188800 Populus trichocarpa HOM05D000399 ORTHO05D000304 4.7e-06 55.5 128 36.7
CSS0047995 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 6.2e-06 55.1 44 56.8
Duzib235G0300 Durio zibethinus HOM05D000399 ORTHO05D010012 6.2e-06 55.1 148 29.7
Glyma.15G004500 Glycine max HOM05D000399 ORTHO05D010012 6.2e-06 55.1 86 36.0
VMungo1080G1791 Vigna mungo HOM05D000399 ORTHO05D010012 6.2e-06 55.1 65 41.5
AL6G31870 Arabidopsis lyrata HOM05D000399 ORTHO05D000304 8.1e-06 54.7 120 35.8
Psat5g304480 Pisum sativum HOM05D000399 ORTHO05D010012 8.1e-06 54.7 72 41.7


User provided reference genes

Program Settings